© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|3794 |
| Gene name | |
| Location | Contig_24:190973..192069 |
| Strand | - |
| Gene length (bp) | 1096 |
| Transcript length (bp) | 990 |
| Coding sequence length (bp) | 990 |
| Protein length (aa) | 330 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00106 | adh_short | short chain dehydrogenase | 3.8E-19 | 29 | 174 |
| PF13561 | adh_short_C2 | Enoyl-(Acyl carrier protein) reductase | 1.2E-10 | 34 | 245 |
| PF08659 | KR | KR domain | 9.1E-08 | 29 | 115 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8BYK4|RDH12_MOUSE | Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1 | 27 | 318 | 3.0E-21 |
| sp|Q8NBN7|RDH13_HUMAN | Retinol dehydrogenase 13 OS=Homo sapiens GN=RDH13 PE=1 SV=2 | 27 | 325 | 2.0E-20 |
| sp|Q8TC12|RDH11_HUMAN | Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2 | 27 | 253 | 3.0E-20 |
| sp|P59837|RDH12_BOVIN | Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1 | 27 | 289 | 4.0E-20 |
| sp|Q96NR8|RDH12_HUMAN | Retinol dehydrogenase 12 OS=Homo sapiens GN=RDH12 PE=1 SV=3 | 27 | 294 | 2.0E-19 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8BYK4|RDH12_MOUSE | Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1 | 27 | 318 | 3.0E-21 |
| sp|Q8NBN7|RDH13_HUMAN | Retinol dehydrogenase 13 OS=Homo sapiens GN=RDH13 PE=1 SV=2 | 27 | 325 | 2.0E-20 |
| sp|Q8TC12|RDH11_HUMAN | Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2 | 27 | 253 | 3.0E-20 |
| sp|P59837|RDH12_BOVIN | Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1 | 27 | 289 | 4.0E-20 |
| sp|Q96NR8|RDH12_HUMAN | Retinol dehydrogenase 12 OS=Homo sapiens GN=RDH12 PE=1 SV=3 | 27 | 294 | 2.0E-19 |
| sp|Q6RVV4|TIC32_PEA | Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1 | 24 | 255 | 4.0E-19 |
| sp|Q8CEE7|RDH13_MOUSE | Retinol dehydrogenase 13 OS=Mus musculus GN=Rdh13 PE=1 SV=1 | 6 | 313 | 5.0E-19 |
| sp|O74959|YJCD_SCHPO | Uncharacterized oxidoreductase C736.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC736.13 PE=3 SV=1 | 15 | 255 | 3.0E-18 |
| sp|Q9QYF1|RDH11_MOUSE | Retinol dehydrogenase 11 OS=Mus musculus GN=Rdh11 PE=1 SV=2 | 27 | 290 | 4.0E-18 |
| sp|Q9ERI6|RDH14_MOUSE | Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=1 SV=1 | 27 | 311 | 1.0E-16 |
| sp|Q9HBH5|RDH14_HUMAN | Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1 | 27 | 311 | 3.0E-16 |
| sp|A2RVM0|TIC32_ARATH | Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1 | 24 | 311 | 4.0E-15 |
| sp|Q5SS80|DHR13_MOUSE | Dehydrogenase/reductase SDR family member 13 OS=Mus musculus GN=Dhrs13 PE=1 SV=1 | 27 | 296 | 4.0E-14 |
| sp|Q17QU7|DHR13_BOVIN | Dehydrogenase/reductase SDR family member 13 OS=Bos taurus GN=DHRS13 PE=2 SV=1 | 27 | 296 | 7.0E-13 |
| sp|Q9VLU5|WWOX_DROME | WW domain-containing oxidoreductase OS=Drosophila melanogaster GN=Wwox PE=2 SV=1 | 23 | 245 | 2.0E-12 |
| sp|Q6UX07|DHR13_HUMAN | Dehydrogenase/reductase SDR family member 13 OS=Homo sapiens GN=DHRS13 PE=2 SV=1 | 27 | 296 | 2.0E-12 |
| sp|Q91WL8|WWOX_MOUSE | WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1 | 24 | 232 | 4.0E-12 |
| sp|Q5F389|WWOX_CHICK | WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2 | 24 | 232 | 6.0E-12 |
| sp|Q9NZC7|WWOX_HUMAN | WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1 | 24 | 232 | 6.0E-12 |
| sp|Q5R9W5|WWOX_PONAB | WW domain-containing oxidoreductase OS=Pongo abelii GN=WWOX PE=2 SV=1 | 24 | 232 | 1.0E-11 |
| sp|Q8N5I4|DHRSX_HUMAN | Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens GN=DHRSX PE=2 SV=2 | 19 | 242 | 3.0E-11 |
| sp|Q92247|BLI4_NEUCR | Putative oxidoreductase bli-4, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=bli-4 PE=1 SV=1 | 22 | 260 | 1.0E-10 |
| sp|A6QP05|DHR12_BOVIN | Dehydrogenase/reductase SDR family member 12 OS=Bos taurus GN=DHRS12 PE=2 SV=1 | 27 | 240 | 2.0E-10 |
| sp|O75828|CBR3_HUMAN | Carbonyl reductase [NADPH] 3 OS=Homo sapiens GN=CBR3 PE=1 SV=3 | 28 | 238 | 2.0E-10 |
| sp|O80333|POR_MARPA | Protochlorophyllide reductase, chloroplastic OS=Marchantia paleacea GN=PORA PE=2 SV=1 | 19 | 241 | 8.0E-10 |
| sp|Q08651|ENV9_YEAST | Probable oxidoreductase ENV9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ENV9 PE=1 SV=1 | 18 | 257 | 2.0E-09 |
| sp|P35320|OXIR_STRLI | Probable oxidoreductase OS=Streptomyces lividans PE=3 SV=1 | 24 | 240 | 2.0E-09 |
| sp|Q071N0|SALR_PAPSO | Salutaridine reductase OS=Papaver somniferum GN=SALR PE=1 SV=1 | 28 | 238 | 2.0E-09 |
| sp|Q03326|OXIR_STRAT | Probable oxidoreductase OS=Streptomyces antibioticus PE=3 SV=1 | 24 | 240 | 4.0E-09 |
| sp|Q8MI29|CBR1_MACFA | Carbonyl reductase [NADPH] 1 OS=Macaca fascicularis GN=CBR1 PE=2 SV=1 | 28 | 238 | 5.0E-09 |
| sp|Q9RPT1|RHLG_PSEAE | Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=rhlG PE=1 SV=1 | 21 | 246 | 7.0E-09 |
| sp|Q8K354|CBR3_MOUSE | Carbonyl reductase [NADPH] 3 OS=Mus musculus GN=Cbr3 PE=1 SV=1 | 28 | 243 | 7.0E-09 |
| sp|A0PJE2|DHR12_HUMAN | Dehydrogenase/reductase SDR family member 12 OS=Homo sapiens GN=DHRS12 PE=2 SV=2 | 27 | 240 | 7.0E-09 |
| sp|Q8VBZ0|DHRSX_MOUSE | Dehydrogenase/reductase SDR family member on chromosome X homolog OS=Mus musculus GN=Dhrsx PE=1 SV=2 | 19 | 276 | 1.0E-08 |
| sp|Q28960|CBR1_PIG | Carbonyl reductase [NADPH] 1 OS=Sus scrofa GN=CBR1 PE=1 SV=3 | 28 | 312 | 2.0E-08 |
| sp|Q9ZAU1|DNRU_STRPE | Putative daunorubicin C-13 ketoreductase DnrU OS=Streptomyces peucetius GN=dnrU PE=3 SV=1 | 21 | 311 | 2.0E-08 |
| sp|Q5RCU5|CBR1_PONAB | Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CBR1 PE=2 SV=3 | 31 | 238 | 2.0E-08 |
| sp|A4UHT7|SALR_PAPBR | Salutaridine reductase OS=Papaver bracteatum GN=SALR PE=1 SV=1 | 28 | 238 | 2.0E-08 |
| sp|Q42536|PORA_ARATH | Protochlorophyllide reductase A, chloroplastic OS=Arabidopsis thaliana GN=PORA PE=1 SV=2 | 29 | 153 | 4.0E-08 |
| sp|O66148|POR_LEPBY | Light-dependent protochlorophyllide reductase OS=Leptolyngbya boryana GN=por PE=3 SV=2 | 29 | 241 | 4.0E-08 |
| sp|Q803A8|WWOX_DANRE | WW domain-containing oxidoreductase OS=Danio rerio GN=wwox PE=2 SV=1 | 23 | 254 | 5.0E-08 |
| sp|Q39617|POR_CHLRE | Protochlorophyllide reductase, chloroplastic OS=Chlamydomonas reinhardtii GN=PORA PE=3 SV=1 | 28 | 241 | 5.0E-08 |
| sp|P16152|CBR1_HUMAN | Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CBR1 PE=1 SV=3 | 31 | 238 | 6.0E-08 |
| sp|P47844|CBR1_RABIT | Carbonyl reductase [NADPH] 1 OS=Oryctolagus cuniculus GN=CBR1 PE=2 SV=2 | 28 | 238 | 1.0E-07 |
| sp|P46331|YXBG_BACSU | Uncharacterized oxidoreductase YxbG OS=Bacillus subtilis (strain 168) GN=yxbG PE=3 SV=2 | 28 | 243 | 1.0E-07 |
| sp|Q49WS9|Y1627_STAS1 | Uncharacterized oxidoreductase SSP1627 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1627 PE=3 SV=1 | 28 | 175 | 2.0E-07 |
| sp|P28845|DHI1_HUMAN | Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Homo sapiens GN=HSD11B1 PE=1 SV=3 | 20 | 203 | 2.0E-07 |
| sp|Q53877|DNRU_STRS5 | Putative daunorubicin C-13 ketoreductase DnrU OS=Streptomyces sp. (strain C5) PE=3 SV=1 | 21 | 311 | 3.0E-07 |
| sp|P37959|YUSZ_BACSU | Uncharacterized oxidoreductase YusZ OS=Bacillus subtilis (strain 168) GN=yusZ PE=3 SV=2 | 28 | 186 | 5.0E-07 |
| sp|O48741|PORC_ARATH | Protochlorophyllide reductase C, chloroplastic OS=Arabidopsis thaliana GN=PORC PE=1 SV=1 | 21 | 116 | 5.0E-07 |
| sp|Q8W3D9|PORB_ORYSJ | Protochlorophyllide reductase B, chloroplastic OS=Oryza sativa subsp. japonica GN=PORB PE=2 SV=1 | 29 | 150 | 5.0E-07 |
| sp|Q8K9J5|FABG_BUCAP | 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=fabG PE=3 SV=1 | 28 | 246 | 5.0E-07 |
| sp|Q9Z8P2|FABG_CHLPN | 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Chlamydia pneumoniae GN=fabG PE=3 SV=1 | 27 | 238 | 5.0E-07 |
| sp|P66780|Y1570_MYCBO | Uncharacterized oxidoreductase Mb1570 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb1570 PE=3 SV=1 | 27 | 168 | 8.0E-07 |
| sp|P9WGS1|Y1543_MYCTU | Uncharacterized oxidoreductase Rv1543 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1543 PE=1 SV=1 | 27 | 168 | 8.0E-07 |
| sp|P9WGS0|Y1543_MYCTO | Uncharacterized oxidoreductase MT1595 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1595 PE=3 SV=1 | 27 | 168 | 8.0E-07 |
| sp|Q7M3I4|DHI1_RABIT | Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Oryctolagus cuniculus GN=HSD11B1 PE=1 SV=2 | 20 | 186 | 8.0E-07 |
| sp|Q42850|PORB_HORVU | Protochlorophyllide reductase B, chloroplastic OS=Hordeum vulgare GN=PORB PE=2 SV=1 | 21 | 153 | 1.0E-06 |
| sp|Q41249|PORA_CUCSA | Protochlorophyllide reductase, chloroplastic OS=Cucumis sativus GN=PORA PE=2 SV=1 | 29 | 135 | 1.0E-06 |
| sp|Q71R50|DHR11_CHICK | Dehydrogenase/reductase SDR family member 11 OS=Gallus gallus GN=DHRS11 PE=2 SV=1 | 26 | 138 | 2.0E-06 |
| sp|Q6F7B8|ACR1_ACIAD | Fatty acyl-CoA reductase OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=acr1 PE=1 SV=2 | 23 | 159 | 3.0E-06 |
| sp|Q9SDT1|POR_DAUCA | Protochlorophyllide reductase, chloroplastic OS=Daucus carota GN=POR1 PE=2 SV=1 | 29 | 116 | 5.0E-06 |
| sp|P21218|PORB_ARATH | Protochlorophyllide reductase B, chloroplastic OS=Arabidopsis thaliana GN=PORB PE=1 SV=3 | 29 | 135 | 5.0E-06 |
| sp|Q59987|POR_SYNY3 | Light-dependent protochlorophyllide reductase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=por PE=3 SV=2 | 29 | 257 | 9.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 25 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 128 | 150 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|3794 MAMKALWDMAAGQFFSCLPRPTEDCTGRTVIVTGANTSLGLEAARHLVRLNAAKVIIACRTVEKGEAACRDIEAS TQRQGVVEVWQLDLSSFDSVKDFASRANKLHRLDVLINNASSMLMRYSRHEGYETMITVNVISTLLLSILLLPIL RQTGSRFNIVPHIVTVSSEAAFLAFFPQRKAKHVLDKLKTDGSFRERYNTSKLLQLMATRKLAEAIDASHKGRVV VNALSPGLCKTELFRDMSFFPVNVVRWLMLHVCLPRSCEVGSRTLLAAAFAGDETHGWWMSSCKLRRYWPALMSG PEGAELTDKIWGELVDVLETTAPDVMAHI* |
| Coding | >OphauB2|3794 ATGGCGATGAAGGCGCTATGGGACATGGCTGCTGGCCAATTTTTTTCCTGTCTACCACGTCCGACAGAAGACTGC ACCGGCCGCACCGTCATTGTGACGGGCGCGAATACCAGCCTGGGACTGGAAGCAGCAAGACACCTTGTGCGTCTC AATGCCGCCAAGGTGATTATTGCTTGTCGCACCGTTGAAAAGGGCGAGGCGGCGTGTCGAGATATCGAGGCCTCG ACGCAGCGCCAGGGAGTCGTCGAGGTCTGGCAGCTCGATTTGAGCTCCTTTGACAGCGTCAAGGACTTTGCGAGT CGCGCCAATAAGCTCCATCGACTCGATGTGCTCATCAACAATGCCAGCTCCATGCTAATGCGGTACTCGAGGCAC GAGGGCTACGAGACCATGATTACCGTCAACGTCATCTCGACGCTGCTGCTCTCCATCTTGCTGCTTCCCATTCTG CGGCAGACTGGCTCACGCTTCAACATTGTGCCTCACATTGTCACGGTGTCGTCGGAAGCGGCATTCTTGGCATTT TTTCCCCAACGAAAAGCCAAGCACGTGCTCGACAAACTCAAGACGGACGGCAGCTTCAGGGAACGCTACAACACC AGCAAGCTCCTGCAGCTCATGGCGACGCGCAAGCTGGCCGAGGCGATTGACGCGTCGCACAAGGGCCGCGTCGTG GTCAATGCGCTCAGCCCGGGCTTGTGCAAGACGGAGCTCTTTCGTGACATGTCCTTTTTCCCAGTAAACGTGGTG CGGTGGTTAATGTTGCACGTCTGTCTTCCTCGCAGCTGCGAAGTGGGATCGCGCACCCTGCTGGCGGCGGCGTTT GCGGGCGACGAGACGCATGGCTGGTGGATGAGCAGCTGCAAGTTAAGGCGGTACTGGCCAGCGTTGATGAGCGGG CCAGAGGGGGCGGAGTTGACGGACAAGATTTGGGGCGAACTGGTTGACGTGCTCGAAACAACTGCCCCTGACGTC ATGGCCCATATCTAG |
| Transcript | >OphauB2|3794 ATGGCGATGAAGGCGCTATGGGACATGGCTGCTGGCCAATTTTTTTCCTGTCTACCACGTCCGACAGAAGACTGC ACCGGCCGCACCGTCATTGTGACGGGCGCGAATACCAGCCTGGGACTGGAAGCAGCAAGACACCTTGTGCGTCTC AATGCCGCCAAGGTGATTATTGCTTGTCGCACCGTTGAAAAGGGCGAGGCGGCGTGTCGAGATATCGAGGCCTCG ACGCAGCGCCAGGGAGTCGTCGAGGTCTGGCAGCTCGATTTGAGCTCCTTTGACAGCGTCAAGGACTTTGCGAGT CGCGCCAATAAGCTCCATCGACTCGATGTGCTCATCAACAATGCCAGCTCCATGCTAATGCGGTACTCGAGGCAC GAGGGCTACGAGACCATGATTACCGTCAACGTCATCTCGACGCTGCTGCTCTCCATCTTGCTGCTTCCCATTCTG CGGCAGACTGGCTCACGCTTCAACATTGTGCCTCACATTGTCACGGTGTCGTCGGAAGCGGCATTCTTGGCATTT TTTCCCCAACGAAAAGCCAAGCACGTGCTCGACAAACTCAAGACGGACGGCAGCTTCAGGGAACGCTACAACACC AGCAAGCTCCTGCAGCTCATGGCGACGCGCAAGCTGGCCGAGGCGATTGACGCGTCGCACAAGGGCCGCGTCGTG GTCAATGCGCTCAGCCCGGGCTTGTGCAAGACGGAGCTCTTTCGTGACATGTCCTTTTTCCCAGTAAACGTGGTG CGGTGGTTAATGTTGCACGTCTGTCTTCCTCGCAGCTGCGAAGTGGGATCGCGCACCCTGCTGGCGGCGGCGTTT GCGGGCGACGAGACGCATGGCTGGTGGATGAGCAGCTGCAAGTTAAGGCGGTACTGGCCAGCGTTGATGAGCGGG CCAGAGGGGGCGGAGTTGACGGACAAGATTTGGGGCGAACTGGTTGACGTGCTCGAAACAACTGCCCCTGACGTC ATGGCCCATATCTAG |
| Gene | >OphauB2|3794 ATGGCGATGAAGGCGCTATGGGACATGGCTGCTGGCCAATTTTTTTCCTGTCTACCACGTCCGACAGAAGACTGC ACCGGCCGCACCGTCATTGTGACGGGCGCGAATACCAGTAGGTTAATGGCAGAGCAACGAGGCCAGTCGAGCTCT AACTAGCATCAGGCCTGGGACTGGAAGCAGCAAGACACCTTGTGCGTCTCAATGCCGCCAAGGTGATTATTGCTT GTCGCACCGTTGAAAAGGGCGAGGCGGCGTGTCGAGATATCGAGGCCTCGACGCAGCGCCAGGGAGTCGTCGAGG TCTGGCAGCTCGATTTGAGCTCCTTTGACAGCGTCAAGGACTTTGCGAGTCGCGCCAATAAGCTCCATCGACTCG ATGTGCTCATCAACAATGCCAGCTCCATGCTAATGCGGTACTCGAGGCACGAGGGCTACGAGACCATGATTACCG TCAACGTCATCTCGACGCTGCTGCTCTCCATCTTGCTGCTTCCCATTCTGCGGCAGACTGGCTCACGCTTCAACA TTGTGCCTCACATTGTCACGGTGTCGTCGGAAGCGGCATTCTTGGTTAGAGTCTTGCAACAGGCAAAGCCCGACT TGACGCTAACCCAGGGGGAGCGCAGGCATTTTTTCCCCAACGAAAAGCCAAGCACGTGCTCGACAAACTCAAGAC GGACGGCAGCTTCAGGGAACGCTACAACACCAGCAAGCTCCTGCAGCTCATGGCGACGCGCAAGCTGGCCGAGGC GATTGACGCGTCGCACAAGGGCCGCGTCGTGGTCAATGCGCTCAGCCCGGGCTTGTGCAAGACGGAGCTCTTTCG TGACATGTCCTTTTTCCCAGTAAACGTGGTGCGGTGGTTAATGTTGCACGTCTGTCTTCCTCGCAGCTGCGAAGT GGGATCGCGCACCCTGCTGGCGGCGGCGTTTGCGGGCGACGAGACGCATGGCTGGTGGATGAGCAGCTGCAAGTT AAGGCGGTACTGGCCAGCGTTGATGAGCGGGCCAGAGGGGGCGGAGTTGACGGACAAGATTTGGGGCGAACTGGT TGACGTGCTCGAAACAACTGCCCCTGACGTCATGGCCCATATCTAG |