Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|3792
Gene name
LocationContig_24:185519..186553
Strand-
Gene length (bp)1034
Transcript length (bp)834
Coding sequence length (bp)834
Protein length (aa) 278

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PFAM Domains

(None)

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|B9WCP3|IRC22_CANDC Increased recombination centers protein 22 OS=Candida dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=IRC22 PE=3 SV=1 74 260 5.0E-16
sp|C5M501|IR222_CANTT Increased recombination centers protein 22-2 OS=Candida tropicalis (strain ATCC MYA-3404 / T1) GN=IRC22-2 PE=3 SV=1 61 253 9.0E-14
sp|Q59YF4|IR221_CANAL Increased recombination centers protein 22-1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=IRC22-1 PE=3 SV=1 74 260 1.0E-11
sp|C4YKP5|IR221_CANAW Increased recombination centers protein 22-1 OS=Candida albicans (strain WO-1) GN=IRC22-1 PE=3 SV=1 74 260 2.0E-11
sp|P0CH79|IR222_CANAW Increased recombination centers protein 22-2 OS=Candida albicans (strain WO-1) GN=IRC22-2 PE=3 SV=1 74 260 3.0E-11
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|B9WCP3|IRC22_CANDC Increased recombination centers protein 22 OS=Candida dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=IRC22 PE=3 SV=1 74 260 5.0E-16
sp|C5M501|IR222_CANTT Increased recombination centers protein 22-2 OS=Candida tropicalis (strain ATCC MYA-3404 / T1) GN=IRC22-2 PE=3 SV=1 61 253 9.0E-14
sp|Q59YF4|IR221_CANAL Increased recombination centers protein 22-1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=IRC22-1 PE=3 SV=1 74 260 1.0E-11
sp|C4YKP5|IR221_CANAW Increased recombination centers protein 22-1 OS=Candida albicans (strain WO-1) GN=IRC22-1 PE=3 SV=1 74 260 2.0E-11
sp|P0CH79|IR222_CANAW Increased recombination centers protein 22-2 OS=Candida albicans (strain WO-1) GN=IRC22-2 PE=3 SV=1 74 260 3.0E-11
sp|Q59XW9|IR222_CANAL Increased recombination centers protein 22-2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=IRC22-2 PE=3 SV=1 74 260 2.0E-10
sp|Q6BW93|IRC22_DEBHA Increased recombination centers protein 22 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=IRC22 PE=3 SV=1 62 258 1.0E-08
sp|A5DYV2|IRC22_LODEL Increased recombination centers protein 22 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=IRC22 PE=3 SV=1 64 259 1.0E-08
sp|A3LU17|IRC22_PICST Increased recombination centers protein 22 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=IRC22 PE=3 SV=1 77 258 2.0E-08
sp|C5M580|IR221_CANTT Increased recombination centers protein 22-1 OS=Candida tropicalis (strain ATCC MYA-3404 / T1) GN=IRC22-1 PE=3 SV=1 61 257 3.0E-07
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 173 192 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|3792
MILSSLIALLAMPVWGVVAQAEPQGDAASAESSSTAGKSSARQPPATITTTFGEGSELGVNLINGRPTRAILTVT
NKDTAAPITLGFVGGTLASPQAEGAIVRNLTTTQYGLVVGAGETRTATYSFVLDMQPQEVRVRLVAAVSDEGGIY
EVEAHSGLATIVEAPTDYTDPQILFLYFLLCALSTGIVYFAYKTWIETLFPLRRPVPARRSRRSLDADAASSPSR
GPVDAADATSSGAKTYDESWIPQHHIQRPVAKRVKSGAGTGAAATPRRKGVE*
Coding >OphauB2|3792
ATGATTCTGTCGTCTCTCATTGCCCTGCTGGCAATGCCAGTCTGGGGCGTTGTTGCCCAGGCCGAGCCCCAAGGC
GACGCAGCGAGCGCCGAGAGCAGCAGCACCGCGGGCAAGTCGTCTGCGCGCCAGCCACCAGCGACGATTACGACT
ACATTTGGCGAGGGCAGCGAGCTGGGCGTCAACCTCATCAATGGGCGGCCGACGCGGGCGATTCTGACTGTGACC
AACAAGGACACGGCGGCGCCCATTACGCTTGGCTTTGTGGGCGGGACGCTGGCGTCGCCACAGGCCGAGGGCGCC
ATTGTGCGGAACCTGACGACGACGCAGTATGGGCTTGTGGTGGGCGCGGGCGAGACGCGGACGGCAACGTATTCC
TTTGTGCTGGACATGCAGCCGCAAGAAGTGCGAGTGCGGCTGGTGGCGGCGGTGTCTGACGAGGGGGGCATCTAT
GAAGTCGAGGCGCATTCGGGGCTGGCGACGATTGTCGAGGCGCCAACGGATTATACTGATCCGCAAATTCTCTTC
TTATACTTCCTCCTCTGCGCCCTATCAACTGGCATCGTCTATTTTGCCTACAAGACGTGGATCGAGACGCTTTTC
CCCCTTCGCCGCCCCGTCCCTGCACGTCGCTCGCGCCGCTCCCTCGATGCCGATGCTGCGTCGTCGCCATCACGC
GGCCCCGTCGACGCTGCCGACGCTACTTCGTCGGGCGCAAAGACATATGACGAGAGCTGGATCCCGCAGCACCAT
ATCCAGCGGCCCGTGGCAAAACGCGTCAAGTCGGGCGCGGGCACGGGCGCGGCGGCCACACCGAGACGGAAGGGC
GTTGAGTAG
Transcript >OphauB2|3792
ATGATTCTGTCGTCTCTCATTGCCCTGCTGGCAATGCCAGTCTGGGGCGTTGTTGCCCAGGCCGAGCCCCAAGGC
GACGCAGCGAGCGCCGAGAGCAGCAGCACCGCGGGCAAGTCGTCTGCGCGCCAGCCACCAGCGACGATTACGACT
ACATTTGGCGAGGGCAGCGAGCTGGGCGTCAACCTCATCAATGGGCGGCCGACGCGGGCGATTCTGACTGTGACC
AACAAGGACACGGCGGCGCCCATTACGCTTGGCTTTGTGGGCGGGACGCTGGCGTCGCCACAGGCCGAGGGCGCC
ATTGTGCGGAACCTGACGACGACGCAGTATGGGCTTGTGGTGGGCGCGGGCGAGACGCGGACGGCAACGTATTCC
TTTGTGCTGGACATGCAGCCGCAAGAAGTGCGAGTGCGGCTGGTGGCGGCGGTGTCTGACGAGGGGGGCATCTAT
GAAGTCGAGGCGCATTCGGGGCTGGCGACGATTGTCGAGGCGCCAACGGATTATACTGATCCGCAAATTCTCTTC
TTATACTTCCTCCTCTGCGCCCTATCAACTGGCATCGTCTATTTTGCCTACAAGACGTGGATCGAGACGCTTTTC
CCCCTTCGCCGCCCCGTCCCTGCACGTCGCTCGCGCCGCTCCCTCGATGCCGATGCTGCGTCGTCGCCATCACGC
GGCCCCGTCGACGCTGCCGACGCTACTTCGTCGGGCGCAAAGACATATGACGAGAGCTGGATCCCGCAGCACCAT
ATCCAGCGGCCCGTGGCAAAACGCGTCAAGTCGGGCGCGGGCACGGGCGCGGCGGCCACACCGAGACGGAAGGGC
GTTGAGTAG
Gene >OphauB2|3792
ATGATTCTGTCGTCTCTCATTGCCCTGCTGGCAATGCCAGTCTGGGGCGTTGTTGCCCAGGTAAGAAGCTGTCAA
TTCCTACTTTTGTCCAAAACCATGCAGAAGCTGATGCTCTGCCCTCTCTCTCTTGTCTCTCTCTCCAGGCCGAGC
CCCAAGGCGACGCAGCGAGCGCCGAGAGCAGCAGCACCGCGGGCAAGTCGTCTGCGCGCCAGCCACCAGCGACGA
TTACGACTACATTTGGCGAGGGCAGCGAGCTGGGCGTCAACCTCATCAATGGGCGGCCGACGCGGGCGATTCTGA
CTGTGACCAACAAGGACACGGCGGCGCCCATTACGCTTGGCTTTGTGGGCGGGACGCTGGCGTCGCCACAGGCCG
AGGGCGCCATTGTGCGGAACCTGACGACGACGCAGTATGGGCTTGTGGTGGGCGCGGGCGAGACGCGGACGGCAA
CGTATTCCTTTGTGCTGGACATGCAGCCGCAAGAAGTGCGAGTGCGGCTGGTGGCGGCGGTGTCTGACGAGGGGG
GCATCTATGAAGTCGAGGCGCATTCGGGGCTGGCGACGATTGTCGAGGCGCCAACGGATTATACTGATCCGCAAA
TGTATGGTCTTGACGACGCCCCCCTTTTCTCCCCTTCTTGTTTTTCCTTGTTTTCCTTTTTTTACCTGGGCAAGT
TGAAGGGAGGAAAAGACGAGGCTGAGCTAACGAGACGACTCAGTCTCTTCTTATACTTCCTCCTCTGCGCCCTAT
CAACTGGCATCGTCTATTTTGCCTACAAGACGTGGATCGAGACGCTTTTCCCCCTTCGCCGCCCCGTCCCTGCAC
GTCGCTCGCGCCGCTCCCTCGATGCCGATGCTGCGTCGTCGCCATCACGCGGCCCCGTCGACGCTGCCGACGCTA
CTTCGTCGGGCGCAAAGACATATGACGAGAGCTGGATCCCGCAGCACCATATCCAGCGGCCCGTGGCAAAACGCG
TCAAGTCGGGCGCGGGCACGGGCGCGGCGGCCACACCGAGACGGAAGGGCGTTGAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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