© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|3774 |
| Gene name | |
| Location | Contig_24:137913..138980 |
| Strand | - |
| Gene length (bp) | 1067 |
| Transcript length (bp) | 903 |
| Coding sequence length (bp) | 903 |
| Protein length (aa) | 301 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10277 | Frag1 | Frag1/DRAM/Sfk1 family | 6.2E-41 | 9 | 222 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9Y7U1|SFK1_SCHPO | Protein sfk1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sfk1 PE=3 SV=1 | 11 | 299 | 6.0E-13 |
| sp|P35735|SFK1_YEAST | Protein SFK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SFK1 PE=1 SV=1 | 11 | 230 | 1.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| 2 | 62 | 81 | 19 |
| 3 | 101 | 123 | 22 |
| 4 | 133 | 152 | 19 |
| 5 | 169 | 191 | 22 |
| 6 | 201 | 220 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|3774 MAARGFISYWLIPLFSSLVWLGMLLGMLLHWIIDTHRRHYPSMNANASIAYISNVGAHELKPLFIAGSVVTTLTL DASFLAERWLRHRRRLVPNTSVGEKVLAILCIAFAVVGTVGLIILSIFDTWRHHRVHNIFLFFFIAGYIISAIFA CWEYQRLGIKNRNYRILRASFWIKLAFILVETSLAIAFAVSSWTKHRNLAAVFEWIVAFIFTLYVLSYVLDLLPA AHTRHPAARFEKPDASQETASDGPYPYPSDYTAPAPGLTTEPAAAAAQQATAPSGSARNPLPQREYPMDSNPPNF * |
| Coding | >OphauB2|3774 ATGGCCGCCCGCGGCTTCATCTCGTACTGGCTCATTCCCCTCTTTTCCAGCCTCGTCTGGCTCGGTATGCTTCTC GGCATGCTCCTTCACTGGATCATCGACACACACCGCCGGCACTACCCCTCGATGAATGCCAACGCCTCCATTGCC TACATTAGCAACGTTGGCGCCCACGAGCTCAAGCCCCTCTTCATCGCCGGCTCCGTCGTCACCACGCTCACCCTC GACGCCTCCTTCTTGGCGGAGCGCTGGCTGCGTCACCGTCGTCGCCTCGTGCCCAATACGTCGGTGGGCGAAAAA GTGCTGGCCATTCTCTGCATTGCCTTTGCAGTTGTTGGCACTGTTGGCCTGATTATCCTGTCCATCTTTGATACC TGGCGCCATCATCGCGTCCACAATATTTTCCTCTTCTTTTTTATTGCGGGATATATTATATCTGCCATTTTTGCC TGCTGGGAGTATCAGCGCCTCGGCATCAAAAACCGCAACTACCGCATCCTCCGCGCGTCATTTTGGATCAAACTC GCCTTCATCCTTGTCGAAACCTCCCTCGCCATCGCCTTTGCCGTTTCCTCGTGGACTAAGCACCGCAACCTCGCT GCCGTCTTTGAGTGGATCGTCGCCTTCATCTTCACCCTCTACGTTCTCTCCTACGTCCTCGATCTCTTGCCCGCT GCCCACACGCGCCATCCTGCCGCTCGCTTCGAAAAACCAGACGCCTCGCAGGAAACTGCTTCCGACGGACCCTAT CCCTATCCGTCTGACTACACTGCCCCAGCGCCCGGCCTCACCACGGAACCCGCTGCAGCTGCCGCACAGCAGGCT ACTGCGCCCTCGGGCTCCGCGCGCAACCCGCTGCCCCAGCGCGAGTACCCCATGGACAGTAATCCCCCAAATTTT TGA |
| Transcript | >OphauB2|3774 ATGGCCGCCCGCGGCTTCATCTCGTACTGGCTCATTCCCCTCTTTTCCAGCCTCGTCTGGCTCGGTATGCTTCTC GGCATGCTCCTTCACTGGATCATCGACACACACCGCCGGCACTACCCCTCGATGAATGCCAACGCCTCCATTGCC TACATTAGCAACGTTGGCGCCCACGAGCTCAAGCCCCTCTTCATCGCCGGCTCCGTCGTCACCACGCTCACCCTC GACGCCTCCTTCTTGGCGGAGCGCTGGCTGCGTCACCGTCGTCGCCTCGTGCCCAATACGTCGGTGGGCGAAAAA GTGCTGGCCATTCTCTGCATTGCCTTTGCAGTTGTTGGCACTGTTGGCCTGATTATCCTGTCCATCTTTGATACC TGGCGCCATCATCGCGTCCACAATATTTTCCTCTTCTTTTTTATTGCGGGATATATTATATCTGCCATTTTTGCC TGCTGGGAGTATCAGCGCCTCGGCATCAAAAACCGCAACTACCGCATCCTCCGCGCGTCATTTTGGATCAAACTC GCCTTCATCCTTGTCGAAACCTCCCTCGCCATCGCCTTTGCCGTTTCCTCGTGGACTAAGCACCGCAACCTCGCT GCCGTCTTTGAGTGGATCGTCGCCTTCATCTTCACCCTCTACGTTCTCTCCTACGTCCTCGATCTCTTGCCCGCT GCCCACACGCGCCATCCTGCCGCTCGCTTCGAAAAACCAGACGCCTCGCAGGAAACTGCTTCCGACGGACCCTAT CCCTATCCGTCTGACTACACTGCCCCAGCGCCCGGCCTCACCACGGAACCCGCTGCAGCTGCCGCACAGCAGGCT ACTGCGCCCTCGGGCTCCGCGCGCAACCCGCTGCCCCAGCGCGAGTACCCCATGGACAGTAATCCCCCAAATTTT TGA |
| Gene | >OphauB2|3774 ATGGCCGCCCGCGGCTTCATCTCGTACTGGGTATCTCCCCCCTCAAACTCCCACCCTCTCTCTCCCTAGAAAAAT AAAAAAATAAAAACTCACCCTCGCCAGCTCATTCCCCTCTTTTCCAGCCTCGTCTGGCTCGGTATGCTTCTCGGC ATGCTCCTTCACTGGATCATCGACACACACCGCCGGCACTACCCCTCGATGAATGCCAACGCCTCCATTGCCTAC ATTAGCAACGTTGGCGCCCACGAGCTCAAGCCCCTCTTCATCGCCGGCTCCGTCGTCACCACGCTCACCCTCGAC GCCTCCTTCTTGGCGGAGCGCTGGCTGCGTCACCGTCGTCGCCTCGTGCCCAATACGTCGGTGGGCGAAAAAGTG CTGGCCATTCTCTGCATTGCCTTTGCAGTTGTTGGCACTGTTGGCCTGATTATCCTGTCCATCTTTGATACCTGG CGCCATCATCGCGTCCACAATATTTTCCTCTTCTTTTTTATTGCGGGATATATTATATCTGCCATTTTTGCCTGC TGGGAGTATCAGCGCCTCGGCATCAGTACGTCCGCCCGCTCCGCTTCTTCTTCCTACTTGTCCTTTTCTCTGCCC TGTATTTCTCATCTCCCATGCTCTAACATGACTTGTCGCCAGAAAACCGCAACTACCGCATCCTCCGCGCGTCAT TTTGGATCAAACTCGCCTTCATCCTTGTCGAAACCTCCCTCGCCATCGCCTTTGCCGTTTCCTCGTGGACTAAGC ACCGCAACCTCGCTGCCGTCTTTGAGTGGATCGTCGCCTTCATCTTCACCCTCTACGTTCTCTCCTACGTCCTCG ATCTCTTGCCCGCTGCCCACACGCGCCATCCTGCCGCTCGCTTCGAAAAACCAGACGCCTCGCAGGAAACTGCTT CCGACGGACCCTATCCCTATCCGTCTGACTACACTGCCCCAGCGCCCGGCCTCACCACGGAACCCGCTGCAGCTG CCGCACAGCAGGCTACTGCGCCCTCGGGCTCCGCGCGCAACCCGCTGCCCCAGCGCGAGTACCCCATGGACAGTA ATCCCCCAAATTTTTGA |