Protein ID | OphauB2|3758 |
Gene name | |
Location | Contig_24:98610..99606 |
Strand | + |
Gene length (bp) | 996 |
Transcript length (bp) | 822 |
Coding sequence length (bp) | 822 |
Protein length (aa) | 274 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF20520 | Ac45-VOA1_TM | V0 complex accessory subunit Ac45/VOA1 transmembrane domain | 4.9E-19 | 223 | 262 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9Y7R6|BIG1_SCHPO | Protein big1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=big1 PE=3 SV=1 | 218 | 261 | 1.0E-06 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 18 | 0.999679 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 225 | 247 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 1856 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|3758 MRLYALSGALALSTAVNAALSDSSPWLLFSTAKFQDTLNTNQIQTSSAVLKHSKEILASCPTEHYLVVSQPGVHG AELGRTGSCAMPHLCRAIEDARVKSRFTVAEVVGHVTHPGIAQHIRESCAQKNKGVTVQHVDLVSIPREDRTSAL FSNDATLASSLDAITSRNSFTIIFYSPPGEPVYEAEFSDSLHIEMKRDMHSMPMRRQDNDSKRDTRPLFEKYQFF TPGVFMGIVTTLILLSILSVGIRALSSLQVSYGAFEKENGPAAHKKYQ* |
Coding | >OphauB2|3758 ATGCGTCTATACGCACTCTCTGGCGCTCTGGCGCTGTCTACAGCGGTCAATGCCGCGCTATCAGACTCGAGCCCA TGGCTCTTATTCTCCACAGCCAAGTTTCAAGACACTTTGAATACAAATCAAATTCAAACTAGCTCAGCCGTACTG AAGCACTCCAAGGAGATTCTGGCATCCTGTCCGACGGAGCACTATCTCGTTGTTTCGCAGCCTGGCGTGCATGGT GCCGAGCTGGGCCGGACGGGGAGCTGTGCGATGCCGCATCTTTGCCGTGCCATCGAGGATGCGCGTGTCAAGAGT CGATTTACTGTGGCTGAGGTTGTTGGCCATGTGACGCATCCAGGCATTGCCCAGCATATTCGAGAGTCTTGCGCC CAGAAGAACAAGGGGGTGACTGTCCAACATGTTGACCTTGTGTCGATTCCTCGAGAGGACCGAACCAGTGCACTG TTTAGCAATGATGCGACACTTGCTAGTAGCTTGGATGCCATCACGTCGAGAAACAGTTTCACCATCATCTTTTAC TCCCCTCCTGGCGAGCCAGTGTACGAAGCAGAGTTCAGTGACTCGCTACACATAGAAATGAAGCGCGACATGCAC TCAATGCCCATGCGGCGCCAGGACAACGACTCGAAGCGAGATACTCGTCCCCTATTCGAAAAGTACCAATTCTTC ACCCCAGGTGTTTTTATGGGCATCGTTACGACCCTGATTCTGCTTTCAATCCTCAGTGTTGGCATCAGGGCTTTG TCGAGTCTTCAGGTGTCGTACGGGGCCTTTGAGAAGGAGAATGGACCGGCTGCCCACAAGAAATATCAGTGA |
Transcript | >OphauB2|3758 ATGCGTCTATACGCACTCTCTGGCGCTCTGGCGCTGTCTACAGCGGTCAATGCCGCGCTATCAGACTCGAGCCCA TGGCTCTTATTCTCCACAGCCAAGTTTCAAGACACTTTGAATACAAATCAAATTCAAACTAGCTCAGCCGTACTG AAGCACTCCAAGGAGATTCTGGCATCCTGTCCGACGGAGCACTATCTCGTTGTTTCGCAGCCTGGCGTGCATGGT GCCGAGCTGGGCCGGACGGGGAGCTGTGCGATGCCGCATCTTTGCCGTGCCATCGAGGATGCGCGTGTCAAGAGT CGATTTACTGTGGCTGAGGTTGTTGGCCATGTGACGCATCCAGGCATTGCCCAGCATATTCGAGAGTCTTGCGCC CAGAAGAACAAGGGGGTGACTGTCCAACATGTTGACCTTGTGTCGATTCCTCGAGAGGACCGAACCAGTGCACTG TTTAGCAATGATGCGACACTTGCTAGTAGCTTGGATGCCATCACGTCGAGAAACAGTTTCACCATCATCTTTTAC TCCCCTCCTGGCGAGCCAGTGTACGAAGCAGAGTTCAGTGACTCGCTACACATAGAAATGAAGCGCGACATGCAC TCAATGCCCATGCGGCGCCAGGACAACGACTCGAAGCGAGATACTCGTCCCCTATTCGAAAAGTACCAATTCTTC ACCCCAGGTGTTTTTATGGGCATCGTTACGACCCTGATTCTGCTTTCAATCCTCAGTGTTGGCATCAGGGCTTTG TCGAGTCTTCAGGTGTCGTACGGGGCCTTTGAGAAGGAGAATGGACCGGCTGCCCACAAGAAATATCAGTGA |
Gene | >OphauB2|3758 ATGCGTCTATACGCACTCTCTGGCGCTCTGGCGCTGTCTACAGCGGTCAATGCCGCGCTATCAGACTCGAGCCCA TGGCTCTTATTCTCCACAGCCAAGTGAGAGCCTCCCTCCTCTCCACCCTCAGAATTCAAGAGCAGCCAACTAACG ACGCTGCAAGGTTTCAAGACACTTTGAATACAAATCAAATTCAAACTAGCTCAGCCGTACTGAAGCACTCCAAGG AGATTCTGGCATCCTGTCCGACGGAGCACTATCTCGTTGTTTCGCAGCCTGGCGTGCATGGTGCCGAGCTGGGCC GGACGGGGAGCTGTGCGATGCCGCATCTTTGCCGTGCCATCGAGGATGCGCGTGTCAAGAGTCGATTTACTGTGG CTGAGGTTGTTGGCCATGTGACGCATCCAGGCATTGCCCAGCATATTCGAGAGTCTTGCGCCCAGAAGAACAAGG GGGTGACTGTCCAACATGTTGACCTTGTGTCGATTCCTCGAGAGGACCGAACCAGTGCACTGTTTAGCAATGGTA GGGTGGATGTATCTACTCCTGTGGCTGAGAATTTTGCTGACAGATATGCCAAGATGCGACACTTGCTAGTAGCTT GGATGCCATCACGTCGAGAAACAGTTTCACCATCATCTTTTACTCCCCTCCTGGCGAGCCAGTGTACGAAGCAGA GTTCAGTGACTCGCTACACATAGAAATGAAGCGCGACATGCACTCAATGCCCATGCGGCGCCAGGACAACGACTC GAAGCGAGATACTCGTCCCCTATTCGAAAAGTACCAATTCTTCACCCCAGGTACGTCCCGGCTATAAGTCCCTCG CGGCCAGAATTTGCATGTTGACTCTATCTAGGTGTTTTTATGGGCATCGTTACGACCCTGATTCTGCTTTCAATC CTCAGTGTTGGCATCAGGGCTTTGTCGAGTCTTCAGGTGTCGTACGGGGCCTTTGAGAAGGAGAATGGACCGGCT GCCCACAAGAAATATCAGTGA |