Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|3744
Gene name
LocationContig_24:58224..59501
Strand+
Gene length (bp)1277
Transcript length (bp)1206
Coding sequence length (bp)1206
Protein length (aa) 402

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01545 Cation_efflux Cation efflux family 8.4E-13 102 306

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O14329|ZRG17_SCHPO Probable zinc transporter zrg17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zrg17 PE=1 SV=1 8 397 7.0E-37
sp|P53735|ZRG17_YEAST Protein ZRG17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRG17 PE=1 SV=1 21 333 8.0E-22
sp|Q6ICY4|MTPC2_ARATH Metal tolerance protein C2 OS=Arabidopsis thaliana GN=MTPC2 PE=2 SV=1 152 366 9.0E-10
sp|Q6P0D1|ZNT6_DANRE Zinc transporter 6 OS=Danio rerio GN=slc30a6 PE=2 SV=1 96 375 2.0E-09
sp|Q8BJM5|ZNT6_MOUSE Zinc transporter 6 OS=Mus musculus GN=Slc30a6 PE=1 SV=1 110 375 2.0E-08
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O14329|ZRG17_SCHPO Probable zinc transporter zrg17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zrg17 PE=1 SV=1 8 397 7.0E-37
sp|P53735|ZRG17_YEAST Protein ZRG17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRG17 PE=1 SV=1 21 333 8.0E-22
sp|Q6ICY4|MTPC2_ARATH Metal tolerance protein C2 OS=Arabidopsis thaliana GN=MTPC2 PE=2 SV=1 152 366 9.0E-10
sp|Q6P0D1|ZNT6_DANRE Zinc transporter 6 OS=Danio rerio GN=slc30a6 PE=2 SV=1 96 375 2.0E-09
sp|Q8BJM5|ZNT6_MOUSE Zinc transporter 6 OS=Mus musculus GN=Slc30a6 PE=1 SV=1 110 375 2.0E-08
sp|Q6GPY1|ZNT6B_XENLA Zinc transporter 6-B OS=Xenopus laevis GN=slc30a6-b PE=2 SV=1 110 375 3.0E-08
sp|Q6NXT4|ZNT6_HUMAN Zinc transporter 6 OS=Homo sapiens GN=SLC30A6 PE=1 SV=2 110 375 3.0E-08
sp|Q0VC54|ZNT6_BOVIN Zinc transporter 6 OS=Bos taurus GN=SLC30A6 PE=2 SV=1 110 375 6.0E-08
sp|Q6AZN8|ZNT6A_XENLA Zinc transporter 6-A OS=Xenopus laevis GN=slc30a6-a PE=2 SV=1 110 375 2.0E-07
sp|Q5ZIH3|ZNT6_CHICK Zinc transporter 6 OS=Gallus gallus GN=SLC30A6 PE=1 SV=1 110 375 2.0E-07
sp|Q5I0B2|ZNT6_XENTR Zinc transporter 6 OS=Xenopus tropicalis GN=slc30a6 PE=2 SV=1 110 375 8.0E-07
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0008324 cation transmembrane transporter activity Yes
GO:0006812 cation transport Yes
GO:0008150 biological_process No
GO:0006811 ion transport No
GO:0006810 transport No
GO:0005575 cellular_component No
GO:0051234 establishment of localization No
GO:0031224 intrinsic component of membrane No
GO:0110165 cellular anatomical entity No
GO:0015075 ion transmembrane transporter activity No
GO:0005215 transporter activity No
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0009987 cellular process No
GO:0022857 transmembrane transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

Domain # Start End Length
1 91 108 17
2 118 140 22
3 161 180 19
4 205 227 22
5 248 270 22
6 275 297 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|3744
MSSDGDGSDTGPAPSPAAPNPFNFQTQVISTSPVKSNIGQRRGHKYKHSSVSAQHQIFQEPPPRPPAVLPASLPI
PTLSEACKSMRREQRNRLYWSGCHVAVAIFIFFRSEGSLAAMALSHLVFFDAGSAALSVAVEVLGNFEAWRRSSI
RHPFGLERVEVLAGFALSIFLLFGGFDLVSHNLKHFLESMGHHEAHHEHSHSHTTSASVMLVAAVAAASSLISAY
GVKNHARIAKLMRVSYLSNLPSVLSNPFHFLTLFFSSLIATLPLVSMSLYTWLDGIICAVIALAMFGLGMRVAIA
QGLMLLMSYGGNRGNEGVSAVLREIESESAVSKIDEAQFWQVHYGLCIATITLRVAKSCDELSLCKLRNRIASLI
QNRLGEGYGTGGSVRWEVTLQMSSEA*
Coding >OphauB2|3744
ATGTCGAGCGATGGCGATGGCTCTGACACGGGGCCTGCCCCCTCTCCCGCCGCTCCGAACCCATTCAACTTTCAG
ACTCAGGTAATATCCACGTCGCCAGTCAAGTCGAACATTGGCCAGCGCCGAGGCCATAAATATAAGCACAGCAGC
GTTTCGGCCCAACATCAAATCTTTCAGGAGCCTCCTCCGCGGCCACCCGCCGTTCTTCCTGCCTCGCTTCCTATA
CCGACTCTTTCCGAGGCATGCAAGAGTATGCGCCGCGAGCAACGCAACCGCCTCTACTGGAGTGGCTGCCATGTT
GCTGTTGCCATCTTCATCTTCTTCCGCTCCGAGGGCTCACTTGCTGCCATGGCCCTGTCGCACCTTGTCTTCTTT
GACGCCGGCAGTGCTGCTCTCAGCGTTGCCGTCGAGGTGCTTGGCAACTTTGAGGCCTGGAGGCGCAGCAGCATT
CGCCACCCCTTTGGTCTCGAGAGGGTAGAGGTCCTTGCCGGCTTTGCCCTCTCCATTTTTCTTCTCTTTGGCGGC
TTTGATCTCGTCTCTCATAACCTCAAACATTTTCTCGAATCCATGGGACACCATGAAGCCCACCACGAGCATTCT
CACAGCCACACCACCTCTGCATCTGTCATGTTGGTTGCTGCCGTTGCTGCTGCAAGCAGTCTCATTTCAGCCTAT
GGCGTCAAGAATCATGCTCGCATAGCAAAACTCATGCGAGTCTCATATTTGTCCAATCTTCCCAGCGTCTTGTCC
AATCCCTTTCATTTTCTTACTCTCTTCTTCTCATCACTCATAGCAACTCTGCCACTCGTGTCCATGTCCCTATAT
ACCTGGCTTGACGGTATTATTTGTGCCGTCATTGCATTGGCCATGTTTGGCCTAGGCATGCGTGTTGCAATAGCA
CAGGGCCTCATGCTCCTCATGTCATATGGAGGTAATAGAGGCAACGAAGGTGTTTCGGCCGTTCTCCGCGAAATC
GAATCCGAATCGGCAGTGTCCAAAATCGACGAGGCTCAGTTTTGGCAAGTTCACTACGGCCTTTGTATTGCAACC
ATTACCCTTCGTGTTGCCAAGAGCTGTGATGAGTTATCTCTCTGCAAACTTCGCAATCGCATTGCATCACTCATA
CAAAACCGCCTTGGTGAAGGTTACGGCACAGGGGGAAGTGTTCGATGGGAGGTGACGCTACAGATGAGCTCAGAA
GCGTAA
Transcript >OphauB2|3744
ATGTCGAGCGATGGCGATGGCTCTGACACGGGGCCTGCCCCCTCTCCCGCCGCTCCGAACCCATTCAACTTTCAG
ACTCAGGTAATATCCACGTCGCCAGTCAAGTCGAACATTGGCCAGCGCCGAGGCCATAAATATAAGCACAGCAGC
GTTTCGGCCCAACATCAAATCTTTCAGGAGCCTCCTCCGCGGCCACCCGCCGTTCTTCCTGCCTCGCTTCCTATA
CCGACTCTTTCCGAGGCATGCAAGAGTATGCGCCGCGAGCAACGCAACCGCCTCTACTGGAGTGGCTGCCATGTT
GCTGTTGCCATCTTCATCTTCTTCCGCTCCGAGGGCTCACTTGCTGCCATGGCCCTGTCGCACCTTGTCTTCTTT
GACGCCGGCAGTGCTGCTCTCAGCGTTGCCGTCGAGGTGCTTGGCAACTTTGAGGCCTGGAGGCGCAGCAGCATT
CGCCACCCCTTTGGTCTCGAGAGGGTAGAGGTCCTTGCCGGCTTTGCCCTCTCCATTTTTCTTCTCTTTGGCGGC
TTTGATCTCGTCTCTCATAACCTCAAACATTTTCTCGAATCCATGGGACACCATGAAGCCCACCACGAGCATTCT
CACAGCCACACCACCTCTGCATCTGTCATGTTGGTTGCTGCCGTTGCTGCTGCAAGCAGTCTCATTTCAGCCTAT
GGCGTCAAGAATCATGCTCGCATAGCAAAACTCATGCGAGTCTCATATTTGTCCAATCTTCCCAGCGTCTTGTCC
AATCCCTTTCATTTTCTTACTCTCTTCTTCTCATCACTCATAGCAACTCTGCCACTCGTGTCCATGTCCCTATAT
ACCTGGCTTGACGGTATTATTTGTGCCGTCATTGCATTGGCCATGTTTGGCCTAGGCATGCGTGTTGCAATAGCA
CAGGGCCTCATGCTCCTCATGTCATATGGAGGTAATAGAGGCAACGAAGGTGTTTCGGCCGTTCTCCGCGAAATC
GAATCCGAATCGGCAGTGTCCAAAATCGACGAGGCTCAGTTTTGGCAAGTTCACTACGGCCTTTGTATTGCAACC
ATTACCCTTCGTGTTGCCAAGAGCTGTGATGAGTTATCTCTCTGCAAACTTCGCAATCGCATTGCATCACTCATA
CAAAACCGCCTTGGTGAAGGTTACGGCACAGGGGGAAGTGTTCGATGGGAGGTGACGCTACAGATGAGCTCAGAA
GCGTAA
Gene >OphauB2|3744
ATGTCGAGCGATGGCGATGGCTCTGACACGGGGCCTGCCCCCTCTCCCGCCGCTCCGAACCCATTCAACTTTCAG
ACTCAGGTAATATCCACGTCGCCAGTCAAGTCGGTAAGTCAGAAAATCTCGTGCCCGAGTTCGATTGTGGTGAAA
AGGGACTGGCTGCTAATAGCTGTTGGCAGAACATTGGCCAGCGCCGAGGCCATAAATATAAGCACAGCAGCGTTT
CGGCCCAACATCAAATCTTTCAGGAGCCTCCTCCGCGGCCACCCGCCGTTCTTCCTGCCTCGCTTCCTATACCGA
CTCTTTCCGAGGCATGCAAGAGTATGCGCCGCGAGCAACGCAACCGCCTCTACTGGAGTGGCTGCCATGTTGCTG
TTGCCATCTTCATCTTCTTCCGCTCCGAGGGCTCACTTGCTGCCATGGCCCTGTCGCACCTTGTCTTCTTTGACG
CCGGCAGTGCTGCTCTCAGCGTTGCCGTCGAGGTGCTTGGCAACTTTGAGGCCTGGAGGCGCAGCAGCATTCGCC
ACCCCTTTGGTCTCGAGAGGGTAGAGGTCCTTGCCGGCTTTGCCCTCTCCATTTTTCTTCTCTTTGGCGGCTTTG
ATCTCGTCTCTCATAACCTCAAACATTTTCTCGAATCCATGGGACACCATGAAGCCCACCACGAGCATTCTCACA
GCCACACCACCTCTGCATCTGTCATGTTGGTTGCTGCCGTTGCTGCTGCAAGCAGTCTCATTTCAGCCTATGGCG
TCAAGAATCATGCTCGCATAGCAAAACTCATGCGAGTCTCATATTTGTCCAATCTTCCCAGCGTCTTGTCCAATC
CCTTTCATTTTCTTACTCTCTTCTTCTCATCACTCATAGCAACTCTGCCACTCGTGTCCATGTCCCTATATACCT
GGCTTGACGGTATTATTTGTGCCGTCATTGCATTGGCCATGTTTGGCCTAGGCATGCGTGTTGCAATAGCACAGG
GCCTCATGCTCCTCATGTCATATGGAGGTAATAGAGGCAACGAAGGTGTTTCGGCCGTTCTCCGCGAAATCGAAT
CCGAATCGGCAGTGTCCAAAATCGACGAGGCTCAGTTTTGGCAAGTTCACTACGGCCTTTGTATTGCAACCATTA
CCCTTCGTGTTGCCAAGAGCTGTGATGAGTTATCTCTCTGCAAACTTCGCAATCGCATTGCATCACTCATACAAA
ACCGCCTTGGTGAAGGTTACGGCACAGGGGGAAGTGTTCGATGGGAGGTGACGCTACAGATGAGCTCAGAAGCGT
AA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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