© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauB2|3700 |
| Gene name | |
| Location | Contig_236:13738..15592 |
| Strand | + |
| Gene length (bp) | 1854 |
| Transcript length (bp) | 1737 |
| Coding sequence length (bp) | 1737 |
| Protein length (aa) | 579 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01565 | FAD_binding_4 | FAD binding domain | 2.9E-20 | 125 | 265 |
| PF08031 | BBE | Berberine and berberine like | 5.0E-10 | 518 | 553 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4AS41|A7056_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 | 24 | 575 | 1.0E-80 |
| sp|D4B1Z7|A2478_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 | 30 | 554 | 1.0E-58 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 125 | 563 | 1.0E-08 |
| sp|D7UQ40|SOL5_ALTSO | Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 | 110 | 310 | 7.0E-08 |
| sp|Q9FZC6|FOX3_ARATH | Flavin-dependent oxidoreductase FOX3 OS=Arabidopsis thaliana GN=FOX3 PE=3 SV=1 | 86 | 292 | 1.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0043168 | anion binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0000166 | nucleotide binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|3700 MSLGRLAVFFGLAASAAATAVYNPQRQACRNIPGDAGWPSANDWAKLNQTVHGHLISSVPLASVCHDAPFNNYDA GECTAIQGHWNQTTLQHINSPAEFLSMYFNNYTCDAFTPRDRPCELGNFPSYVINVTGPADVQAGVQFAREHNIR LIVKNTGHDYLGKSSGHGSLSLWTHNLKTTQFLSNYTSPQYRGPAMKSGAGVEGFDYYQAVNRTGHRAVGGSCPT VGVAGGYTQGGGHSMLSSMYGMGADNVLEWEVVTLDGRHLIATPERHSDLYWAMSGGGGGTYAVAISMTSRIFVD SIVGGASLTFNDSVVGNEAFWEAITQLHVLLAPFVDGGNSLIYTLAEKEFASWAWTMPGANDARVAELMQPFLAD LEQRGIPYHYQPRIAPNFYDHYNFYIGPLPEGFAGYTPFTGSRIIPRHLMTDPERGADVTAVLRNITMTEGYPFL PCQALNVRHQKHPKNAVLPAWRDAMAICLMSGTWDPHASPEEMAARQDVAANVVQPMIDDATPGGGVYLNEANYL QHDWQREFYGDNYDRLVEVKRRWDPDHLLWGYTTVDSERWYQDSEARLCRTDA* |
| Coding | >OphauB2|3700 ATGTCTCTTGGTCGACTCGCCGTCTTTTTCGGCCTGGCTGCCTCGGCAGCGGCCACGGCCGTGTACAATCCTCAG AGACAGGCTTGTCGCAACATTCCTGGTGATGCCGGCTGGCCGTCGGCCAATGACTGGGCCAAGCTCAACCAGACT GTCCACGGGCATTTGATTTCATCGGTACCTCTGGCCAGCGTGTGCCACGATGCGCCCTTCAACAACTACGACGCC GGCGAATGTACCGCTATCCAGGGGCACTGGAACCAGACGACGCTTCAGCACATCAACTCGCCAGCCGAATTCCTC AGCATGTACTTCAACAACTACACATGTGACGCCTTTACACCACGTGATCGCCCCTGCGAGCTGGGCAACTTCCCT AGCTATGTCATCAACGTGACGGGCCCGGCAGATGTGCAGGCTGGTGTACAGTTCGCACGGGAGCACAATATTCGT CTTATTGTCAAGAATACGGGTCACGACTACCTCGGCAAGTCTTCGGGCCACGGTAGTCTCTCTCTGTGGACACAC AACCTCAAGACGACTCAGTTTCTCAGCAACTACACGTCACCGCAGTACCGGGGTCCTGCTATGAAGAGTGGCGCC GGTGTCGAGGGCTTTGACTACTACCAGGCTGTTAACCGAACTGGCCACCGCGCCGTGGGCGGATCGTGCCCAACA GTCGGCGTTGCTGGCGGCTACACGCAGGGCGGGGGCCATTCGATGCTGTCGAGCATGTACGGAATGGGAGCGGAT AATGTGCTTGAGTGGGAGGTTGTGACGCTCGATGGCCGCCATTTGATTGCTACCCCTGAGCGCCACTCTGATCTC TACTGGGCCATGAGCGGCGGCGGCGGCGGCACCTATGCTGTGGCCATCTCCATGACGAGCCGCATCTTTGTCGAT AGCATTGTTGGCGGAGCGTCCCTCACCTTTAACGACTCGGTTGTCGGTAACGAGGCATTCTGGGAAGCTATTACG CAGCTGCATGTCCTTTTGGCTCCTTTTGTTGATGGCGGCAACTCTCTCATTTACACGCTGGCAGAAAAGGAGTTC GCCTCGTGGGCCTGGACTATGCCTGGAGCCAATGACGCGCGCGTGGCCGAGTTGATGCAGCCCTTCCTGGCGGAC CTGGAGCAGCGCGGCATCCCCTACCATTACCAGCCACGAATTGCGCCCAACTTTTACGATCACTACAACTTTTAT ATTGGCCCGCTGCCCGAGGGCTTCGCGGGCTATACGCCCTTTACCGGATCGCGCATCATTCCTCGCCATCTCATG ACGGATCCTGAGCGCGGGGCCGACGTGACTGCTGTTTTGCGCAACATCACCATGACGGAAGGCTATCCCTTCTTG CCCTGCCAAGCCTTGAACGTCAGGCATCAGAAGCACCCCAAGAATGCTGTGCTGCCGGCCTGGCGCGACGCCATG GCCATTTGCCTCATGTCTGGAACGTGGGACCCGCATGCGTCGCCCGAGGAAATGGCTGCGCGGCAAGACGTTGCC GCCAATGTGGTGCAGCCCATGATTGACGATGCAACGCCTGGCGGTGGTGTCTATCTCAACGAGGCCAACTACTTG CAGCACGACTGGCAGCGTGAGTTTTATGGCGACAACTATGACCGTCTGGTGGAGGTGAAGCGCCGCTGGGACCCC GACCACTTGCTCTGGGGATATACCACTGTCGACAGCGAGAGGTGGTACCAGGACTCGGAGGCTCGTCTGTGCCGC ACCGATGCCTAG |
| Transcript | >OphauB2|3700 ATGTCTCTTGGTCGACTCGCCGTCTTTTTCGGCCTGGCTGCCTCGGCAGCGGCCACGGCCGTGTACAATCCTCAG AGACAGGCTTGTCGCAACATTCCTGGTGATGCCGGCTGGCCGTCGGCCAATGACTGGGCCAAGCTCAACCAGACT GTCCACGGGCATTTGATTTCATCGGTACCTCTGGCCAGCGTGTGCCACGATGCGCCCTTCAACAACTACGACGCC GGCGAATGTACCGCTATCCAGGGGCACTGGAACCAGACGACGCTTCAGCACATCAACTCGCCAGCCGAATTCCTC AGCATGTACTTCAACAACTACACATGTGACGCCTTTACACCACGTGATCGCCCCTGCGAGCTGGGCAACTTCCCT AGCTATGTCATCAACGTGACGGGCCCGGCAGATGTGCAGGCTGGTGTACAGTTCGCACGGGAGCACAATATTCGT CTTATTGTCAAGAATACGGGTCACGACTACCTCGGCAAGTCTTCGGGCCACGGTAGTCTCTCTCTGTGGACACAC AACCTCAAGACGACTCAGTTTCTCAGCAACTACACGTCACCGCAGTACCGGGGTCCTGCTATGAAGAGTGGCGCC GGTGTCGAGGGCTTTGACTACTACCAGGCTGTTAACCGAACTGGCCACCGCGCCGTGGGCGGATCGTGCCCAACA GTCGGCGTTGCTGGCGGCTACACGCAGGGCGGGGGCCATTCGATGCTGTCGAGCATGTACGGAATGGGAGCGGAT AATGTGCTTGAGTGGGAGGTTGTGACGCTCGATGGCCGCCATTTGATTGCTACCCCTGAGCGCCACTCTGATCTC TACTGGGCCATGAGCGGCGGCGGCGGCGGCACCTATGCTGTGGCCATCTCCATGACGAGCCGCATCTTTGTCGAT AGCATTGTTGGCGGAGCGTCCCTCACCTTTAACGACTCGGTTGTCGGTAACGAGGCATTCTGGGAAGCTATTACG CAGCTGCATGTCCTTTTGGCTCCTTTTGTTGATGGCGGCAACTCTCTCATTTACACGCTGGCAGAAAAGGAGTTC GCCTCGTGGGCCTGGACTATGCCTGGAGCCAATGACGCGCGCGTGGCCGAGTTGATGCAGCCCTTCCTGGCGGAC CTGGAGCAGCGCGGCATCCCCTACCATTACCAGCCACGAATTGCGCCCAACTTTTACGATCACTACAACTTTTAT ATTGGCCCGCTGCCCGAGGGCTTCGCGGGCTATACGCCCTTTACCGGATCGCGCATCATTCCTCGCCATCTCATG ACGGATCCTGAGCGCGGGGCCGACGTGACTGCTGTTTTGCGCAACATCACCATGACGGAAGGCTATCCCTTCTTG CCCTGCCAAGCCTTGAACGTCAGGCATCAGAAGCACCCCAAGAATGCTGTGCTGCCGGCCTGGCGCGACGCCATG GCCATTTGCCTCATGTCTGGAACGTGGGACCCGCATGCGTCGCCCGAGGAAATGGCTGCGCGGCAAGACGTTGCC GCCAATGTGGTGCAGCCCATGATTGACGATGCAACGCCTGGCGGTGGTGTCTATCTCAACGAGGCCAACTACTTG CAGCACGACTGGCAGCGTGAGTTTTATGGCGACAACTATGACCGTCTGGTGGAGGTGAAGCGCCGCTGGGACCCC GACCACTTGCTCTGGGGATATACCACTGTCGACAGCGAGAGGTGGTACCAGGACTCGGAGGCTCGTCTGTGCCGC ACCGATGCCTAG |
| Gene | >OphauB2|3700 ATGTCTCTTGGTCGACTCGCCGTCTTTTTCGGCCTGGCTGCCTCGGCAGCGGCCACGGCCGTGTACAATCCTCAG AGACAGGCTTGTCGCAACATTCCTGGTGATGCCGGCTGGCCGTCGGCCAATGACTGGGCCAAGCTCAACCAGACT GTCCACGGGCATTTGATTTCATCGGTACCTCTGGCCAGCGTGTGCCACGATGCGCCCTTCAACAACTACGACGCC GGCGAATGTACCGCTATCCAGGGGCACTGGAACCAGACGACGCTTCAGCAGTATGTTTTTATAGCCTTGAGCCAA TCACGCGTGTCGAGGTGACTGACGAGCCGTGTGCAGCATCAACTCGCCAGCCGAATTCCTCAGCATGTACTTCAA CAACTACACATGTGACGCCTTTACACCACGTGATCGCCCCTGCGAGCTGGGCAACTTCCCTAGCTATGTCATCAA CGTGACGGGCCCGGCAGATGTGCAGGCTGGTGTACAGTTCGCACGGGAGCACAATATTCGTCTTATTGTCAAGAA TACGGGTCACGAGTAAGTTGTGAGCACCACGGTGTAGTCAAAGAGTCTTGCTAACCATGGTTGTGTAGCTACCTC GGCAAGTCTTCGGGCCACGGTAGTCTCTCTCTGTGGACACACAACCTCAAGACGACTCAGTTTCTCAGCAACTAC ACGTCACCGCAGTACCGGGGTCCTGCTATGAAGAGTGGCGCCGGTGTCGAGGGCTTTGACTACTACCAGGCTGTT AACCGAACTGGCCACCGCGCCGTGGGCGGATCGTGCCCAACAGTCGGCGTTGCTGGCGGCTACACGCAGGGCGGG GGCCATTCGATGCTGTCGAGCATGTACGGAATGGGAGCGGATAATGTGCTTGAGTGGGAGGTTGTGACGCTCGAT GGCCGCCATTTGATTGCTACCCCTGAGCGCCACTCTGATCTCTACTGGGCCATGAGCGGCGGCGGCGGCGGCACC TATGCTGTGGCCATCTCCATGACGAGCCGCATCTTTGTCGATAGCATTGTTGGCGGAGCGTCCCTCACCTTTAAC GACTCGGTTGTCGGTAACGAGGCATTCTGGGAAGCTATTACGCAGCTGCATGTCCTTTTGGCTCCTTTTGTTGAT GGCGGCAACTCTCTCATTTACACGCTGGCAGAAAAGGAGTTCGCCTCGTGGGCCTGGACTATGCCTGGAGCCAAT GACGCGCGCGTGGCCGAGTTGATGCAGCCCTTCCTGGCGGACCTGGAGCAGCGCGGCATCCCCTACCATTACCAG CCACGAATTGCGCCCAACTTTTACGATCACTACAACTTTTATATTGGCCCGCTGCCCGAGGGCTTCGCGGGCTAT ACGCCCTTTACCGGATCGCGCATCATTCCTCGCCATCTCATGACGGATCCTGAGCGCGGGGCCGACGTGACTGCT GTTTTGCGCAACATCACCATGACGGAAGGCTATCCCTTCTTGCCCTGCCAAGCCTTGAACGTCAGGCATCAGAAG CACCCCAAGAATGCTGTGCTGCCGGCCTGGCGCGACGCCATGGCCATTTGCCTCATGTCTGGAACGTGGGACCCG CATGCGTCGCCCGAGGAAATGGCTGCGCGGCAAGACGTTGCCGCCAATGTGGTGCAGCCCATGATTGACGATGCA ACGCCTGGCGGTGGTGTCTATCTCAACGAGGCCAACTACTTGCAGCACGACTGGCAGCGTGAGTTTTATGGCGAC AACTATGACCGTCTGGTGGAGGTGAAGCGCCGCTGGGACCCCGACCACTTGCTCTGGGGATATACCACTGTCGAC AGCGAGAGGTGGTACCAGGACTCGGAGGCTCGTCTGTGCCGCACCGATGCCTAG |