© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|36 |
| Gene name | |
| Location | Contig_1:87675..88704 |
| Strand | + |
| Gene length (bp) | 1029 |
| Transcript length (bp) | 648 |
| Coding sequence length (bp) | 648 |
| Protein length (aa) | 216 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04145 | Ctr | Ctr copper transporter family | 5.6E-39 | 47 | 192 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94722|CTR4_SCHPO | Copper transport protein ctr4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ctr4 PE=1 SV=1 | 8 | 212 | 1.0E-29 |
| sp|Q06686|CTR3_YEAST | Copper transport protein CTR3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CTR3 PE=1 SV=1 | 27 | 212 | 8.0E-22 |
| sp|Q9P7F9|CTR5_SCHPO | Copper transport protein ctr5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ctr5 PE=1 SV=1 | 43 | 192 | 1.0E-16 |
| sp|Q8K211|COPT1_MOUSE | High affinity copper uptake protein 1 OS=Mus musculus GN=Slc31a1 PE=2 SV=1 | 32 | 196 | 1.0E-09 |
| sp|O15431|COPT1_HUMAN | High affinity copper uptake protein 1 OS=Homo sapiens GN=SLC31A1 PE=1 SV=1 | 2 | 196 | 8.0E-09 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94722|CTR4_SCHPO | Copper transport protein ctr4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ctr4 PE=1 SV=1 | 8 | 212 | 1.0E-29 |
| sp|Q06686|CTR3_YEAST | Copper transport protein CTR3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CTR3 PE=1 SV=1 | 27 | 212 | 8.0E-22 |
| sp|Q9P7F9|CTR5_SCHPO | Copper transport protein ctr5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ctr5 PE=1 SV=1 | 43 | 192 | 1.0E-16 |
| sp|Q8K211|COPT1_MOUSE | High affinity copper uptake protein 1 OS=Mus musculus GN=Slc31a1 PE=2 SV=1 | 32 | 196 | 1.0E-09 |
| sp|O15431|COPT1_HUMAN | High affinity copper uptake protein 1 OS=Homo sapiens GN=SLC31A1 PE=1 SV=1 | 2 | 196 | 8.0E-09 |
| sp|Q9JK41|COPT1_RAT | High affinity copper uptake protein 1 OS=Rattus norvegicus GN=Slc31a1 PE=2 SV=1 | 35 | 196 | 8.0E-09 |
| sp|Q8WNR0|COPT1_PIG | High affinity copper uptake protein 1 OS=Sus scrofa GN=SLC31A1 PE=2 SV=1 | 65 | 196 | 2.0E-08 |
| sp|Q5RAS6|COPT1_PONAB | High affinity copper uptake protein 1 OS=Pongo abelii GN=SLC31A1 PE=2 SV=1 | 2 | 196 | 3.0E-08 |
| sp|Q9USV7|CTR6_SCHPO | Copper transport protein ctr6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ctr6 PE=1 SV=1 | 33 | 188 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0005375 | copper ion transmembrane transporter activity | Yes |
| GO:0035434 | copper ion transmembrane transport | Yes |
| GO:0051179 | localization | No |
| GO:0006811 | ion transport | No |
| GO:0008324 | cation transmembrane transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0000041 | transition metal ion transport | No |
| GO:0006812 | cation transport | No |
| GO:0006825 | copper ion transport | No |
| GO:0008150 | biological_process | No |
| GO:0003674 | molecular_function | No |
| GO:0030001 | metal ion transport | No |
| GO:0046915 | transition metal ion transmembrane transporter activity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0098655 | cation transmembrane transport | No |
| GO:0022890 | inorganic cation transmembrane transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0006810 | transport | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0098662 | inorganic cation transmembrane transport | No |
| GO:0005215 | transporter activity | No |
| GO:0055085 | transmembrane transport | No |
| GO:0009987 | cellular process | No |
| GO:0098660 | inorganic ion transmembrane transport | No |
| GO:0046873 | metal ion transmembrane transporter activity | No |
| GO:0034220 | ion transmembrane transport | No |
| GO:0051234 | establishment of localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 66 | 88 | 22 |
| 2 | 172 | 194 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|36 MHGHDHGSMTMTTATTRAMATGRPMAGMGGHGGHGGHGGGSGCKISMLFNLNTIDSCFLSRQWKITSIGMFAGSC IGVFFLGVLLELLRRGVKEYDGYIVRAHVAKYANAAPGAPQPGAEGGSVSSTKDATPAAAAPVVPPFRPSVLQQL CRAVLHLLQFFVAYILMLLAMYYNGYLLLCIFLGVFVGAFAFQWEKLPLGGQQTSAAQEATVCCG* |
| Coding | >OphauB2|36 ATGCACGGCCATGACCACGGCTCCATGACCATGACAACAGCCACCACCAGAGCCATGGCCACGGGCCGTCCAATG GCAGGAATGGGAGGCCACGGCGGCCACGGCGGCCACGGAGGCGGCAGCGGATGCAAGATATCGATGCTCTTCAAC CTCAACACCATCGACTCATGCTTCCTCTCGCGCCAATGGAAAATCACGTCCATCGGCATGTTTGCTGGCTCGTGC ATTGGCGTCTTCTTCCTCGGCGTCCTTCTCGAGCTTCTGCGCCGCGGCGTCAAGGAGTATGACGGCTACATTGTC CGCGCCCACGTTGCAAAGTATGCCAATGCCGCTCCCGGTGCGCCTCAGCCCGGCGCAGAGGGCGGCTCCGTCAGC AGCACAAAGGACGCCACGCCGGCCGCCGCTGCCCCCGTGGTGCCTCCCTTTCGCCCCAGTGTCTTGCAGCAGCTC TGCCGTGCGGTGCTGCACCTGCTCCAGTTCTTTGTCGCTTATATTCTCATGCTGCTTGCCATGTATTACAACGGC TACCTCCTCCTATGCATCTTCCTGGGCGTTTTTGTTGGCGCTTTTGCCTTCCAGTGGGAGAAGCTGCCGCTCGGC GGCCAGCAGACGAGTGCGGCCCAAGAGGCAACGGTGTGCTGCGGCTAA |
| Transcript | >OphauB2|36 ATGCACGGCCATGACCACGGCTCCATGACCATGACAACAGCCACCACCAGAGCCATGGCCACGGGCCGTCCAATG GCAGGAATGGGAGGCCACGGCGGCCACGGCGGCCACGGAGGCGGCAGCGGATGCAAGATATCGATGCTCTTCAAC CTCAACACCATCGACTCATGCTTCCTCTCGCGCCAATGGAAAATCACGTCCATCGGCATGTTTGCTGGCTCGTGC ATTGGCGTCTTCTTCCTCGGCGTCCTTCTCGAGCTTCTGCGCCGCGGCGTCAAGGAGTATGACGGCTACATTGTC CGCGCCCACGTTGCAAAGTATGCCAATGCCGCTCCCGGTGCGCCTCAGCCCGGCGCAGAGGGCGGCTCCGTCAGC AGCACAAAGGACGCCACGCCGGCCGCCGCTGCCCCCGTGGTGCCTCCCTTTCGCCCCAGTGTCTTGCAGCAGCTC TGCCGTGCGGTGCTGCACCTGCTCCAGTTCTTTGTCGCTTATATTCTCATGCTGCTTGCCATGTATTACAACGGC TACCTCCTCCTATGCATCTTCCTGGGCGTTTTTGTTGGCGCTTTTGCCTTCCAGTGGGAGAAGCTGCCGCTCGGC GGCCAGCAGACGAGTGCGGCCCAAGAGGCAACGGTGTGCTGCGGCTAA |
| Gene | >OphauB2|36 ATGCACGGCCATGACCACGGCTCCATGACCATGACAACAGCCACCACCAGAGCCATGGCCACGGGCCGTCCAATG GCAGGAATGGGAGGCCACGGCGGCCACGGCGGCCACGGAGGCGGCAGCGGATGCAAGATATCGGTAGGCATCTGC TCTCGGCTCGCTCCTTCGTTTACTCTGGCTCTTGCTCTCTCAACTTGGCCCCTCGGCTTGCCCTCTTCTCTCACT CTCACTCTCTCCCCTCTCACACACACACTCTCTCTCTCTCTCCTCTCTCTCCTCATCACACACCCCCCCTCTCTC TCCCTCTCTCTCTCTCCTCACTCTCCTCATCACACACACACACACTCCCTCTCTCACTCTCTGGCTCAGGGTCAG TCTCACTAACCTTGGTCCAGATGCTCTTCAACCTCAACACCATCGACTCATGCTTCCTCTCGCGCCAATGGAAAA TCACGTCCATCGGCATGTTTGCTGGCTCGTGCATTGGCGTCTTCTTCCTCGGCGTCCTTCTCGAGCTTCTGCGCC GCGGCGTCAAGGAGTATGACGGCTACATTGTCCGCGCCCACGTTGCAAAGTATGCCAATGCCGCTCCCGGTGCGC CTCAGCCCGGCGCAGAGGGCGGCTCCGTCAGCAGCACAAAGGACGCCACGCCGGCCGCCGCTGCCCCCGTGGTGC CTCCCTTTCGCCCCAGTGTCTTGCAGCAGCTCTGCCGTGCGGTGCTGCACCTGCTCCAGTTCTTTGTCGCTTATA TTCTCATGCTGGTAAGTGGCGCCATGGAGGCTGAGTGTCTTGTGGGGGCCAGTGGCTGACCGAGTGCGCCGCTGC TGCAGCTTGCCATGTATTACAACGGCTACCTCCTCCTATGCATCTTCCTGGGCGTTTTTGTTGGCGCTTTTGCCT TCCAGTGGGAGAAGCTGCCGCTCGGGTGAGTCAAGCAGTGCCAGACGTGTGCCAGGAGGCGAGACTGACAGCGAC GGCAGCGGCCAGCAGACGAGTGCGGCCCAAGAGGCAACGGTGTGCTGCGGCTAA |