© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauB2|3588 |
| Gene name | |
| Location | Contig_23:24724..27061 |
| Strand | + |
| Gene length (bp) | 2337 |
| Transcript length (bp) | 2118 |
| Coding sequence length (bp) | 2118 |
| Protein length (aa) | 706 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05693 | Glycogen_syn | Glycogen synthase | 0.0E+00 | 20 | 660 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O93869|GYS_NEUCR | Glycogen [starch] synthase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=gsy-1 PE=2 SV=2 | 1 | 672 | 0.0E+00 |
| sp|P23337|GYS1_YEAST | Glycogen [starch] synthase isoform 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GSY1 PE=1 SV=3 | 9 | 669 | 0.0E+00 |
| sp|P27472|GYS2_YEAST | Glycogen [starch] synthase isoform 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GSY2 PE=1 SV=3 | 11 | 669 | 0.0E+00 |
| sp|P13834|GYS1_RABIT | Glycogen [starch] synthase, muscle OS=Oryctolagus cuniculus GN=GYS1 PE=1 SV=4 | 12 | 666 | 0.0E+00 |
| sp|A2RRU1|GYS1_RAT | Glycogen [starch] synthase, muscle OS=Rattus norvegicus GN=Gys1 PE=1 SV=1 | 12 | 679 | 0.0E+00 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O93869|GYS_NEUCR | Glycogen [starch] synthase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=gsy-1 PE=2 SV=2 | 1 | 672 | 0.0E+00 |
| sp|P23337|GYS1_YEAST | Glycogen [starch] synthase isoform 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GSY1 PE=1 SV=3 | 9 | 669 | 0.0E+00 |
| sp|P27472|GYS2_YEAST | Glycogen [starch] synthase isoform 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GSY2 PE=1 SV=3 | 11 | 669 | 0.0E+00 |
| sp|P13834|GYS1_RABIT | Glycogen [starch] synthase, muscle OS=Oryctolagus cuniculus GN=GYS1 PE=1 SV=4 | 12 | 666 | 0.0E+00 |
| sp|A2RRU1|GYS1_RAT | Glycogen [starch] synthase, muscle OS=Rattus norvegicus GN=Gys1 PE=1 SV=1 | 12 | 679 | 0.0E+00 |
| sp|Q9Z1E4|GYS1_MOUSE | Glycogen [starch] synthase, muscle OS=Mus musculus GN=Gys1 PE=1 SV=2 | 12 | 679 | 0.0E+00 |
| sp|A7MB78|GYS1_BOVIN | Glycogen [starch] synthase, muscle OS=Bos taurus GN=GYS1 PE=2 SV=1 | 12 | 660 | 0.0E+00 |
| sp|P13807|GYS1_HUMAN | Glycogen [starch] synthase, muscle OS=Homo sapiens GN=GYS1 PE=1 SV=2 | 12 | 666 | 0.0E+00 |
| sp|Q8MJ26|GYS1_MACMU | Glycogen [starch] synthase, muscle OS=Macaca mulatta GN=GYS1 PE=2 SV=1 | 12 | 679 | 0.0E+00 |
| sp|Q5R9H0|GYS1_PONAB | Glycogen [starch] synthase, muscle OS=Pongo abelii GN=GYS1 PE=2 SV=1 | 12 | 666 | 0.0E+00 |
| sp|P17625|GYS2_RAT | Glycogen [starch] synthase, liver OS=Rattus norvegicus GN=Gys2 PE=1 SV=2 | 2 | 613 | 0.0E+00 |
| sp|Q8VCB3|GYS2_MOUSE | Glycogen [starch] synthase, liver OS=Mus musculus GN=Gys2 PE=1 SV=2 | 13 | 613 | 0.0E+00 |
| sp|P54840|GYS2_HUMAN | Glycogen [starch] synthase, liver OS=Homo sapiens GN=GYS2 PE=1 SV=2 | 21 | 613 | 0.0E+00 |
| sp|Q9VFC8|GYS_DROME | Glycogen [starch] synthase OS=Drosophila melanogaster GN=GlyS PE=1 SV=2 | 14 | 650 | 0.0E+00 |
| sp|Q9U2D9|GYS_CAEEL | Glycogen [starch] synthase OS=Caenorhabditis elegans GN=gsy-1 PE=1 SV=1 | 17 | 609 | 0.0E+00 |
| sp|Q55GH4|GYS_DICDI | Glycogen [starch] synthase OS=Dictyostelium discoideum GN=glcS PE=3 SV=1 | 5 | 609 | 0.0E+00 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004373 | glycogen (starch) synthase activity | Yes |
| GO:0005978 | glycogen biosynthetic process | Yes |
| GO:0006091 | generation of precursor metabolites and energy | No |
| GO:0016758 | hexosyltransferase activity | No |
| GO:0015980 | energy derivation by oxidation of organic compounds | No |
| GO:0016051 | carbohydrate biosynthetic process | No |
| GO:0005977 | glycogen metabolic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0016757 | glycosyltransferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0009059 | macromolecule biosynthetic process | No |
| GO:0034645 | cellular macromolecule biosynthetic process | No |
| GO:0008150 | biological_process | No |
| GO:0033692 | cellular polysaccharide biosynthetic process | No |
| GO:0005975 | carbohydrate metabolic process | No |
| GO:0006112 | energy reserve metabolic process | No |
| GO:0006073 | cellular glucan metabolic process | No |
| GO:0005976 | polysaccharide metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0044264 | cellular polysaccharide metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0035251 | UDP-glucosyltransferase activity | No |
| GO:0016740 | transferase activity | No |
| GO:0008194 | UDP-glycosyltransferase activity | No |
| GO:0044262 | cellular carbohydrate metabolic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0009250 | glucan biosynthetic process | No |
| GO:0034637 | cellular carbohydrate biosynthetic process | No |
| GO:0000271 | polysaccharide biosynthetic process | No |
| GO:0008152 | metabolic process | No |
| GO:0046527 | glucosyltransferase activity | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0044260 | cellular macromolecule metabolic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0044042 | glucan metabolic process | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 46 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|3588 MAFEDEQPVVRDVKNHLLFEVATEVAHRVGGIYSVIKSKAPVTTAEYGDRYTLIGPLNHQSAAVEVEVMEPTVPA IAKTMQSMKDRGINIVYGRWLIEGAPRVILIDTKTAYGFLDEWKTDLWNIASIPSPPSDDETNETIVFGYLVAWF LGEFVSHETKKAVIAHFHEWLAGVALPLAKCRRIDVTTIFTTHATLLGRYLCAGSVDFYNNLQNFDVDAEAGKRG IYHRYCIERAAAHSCDVFTTVSHITAFEAEHLLKRKPDGVLPNGLNVTKFSAVHEFQNLHQQAKEKIHDFVRGHF YGHYDFEPENTLYVFTAGRYEFRNKGVDMFIESLARLNHRLKSAGSKMTIVAFIIMPAQTTSLTVESLKGQAVIK SLRDTTHVIEQNIGRRLFERSLKWHEGEPMPDEKDLISAQDRVLMRRRLFAMKRHGLPPIVTHNMVNDHDDPILN QIRRVQLFNHPSDRVKVVFHPEFLNSANPVLPLDYDDFVRGCHLGVFASYYEPWGYTPAECTVMGVPSITTNLSG FGCYMEELIENSSDYGIYIVDRRSKGVDDSVNQLTTFMFDFCGKSQRQRINQRNRTERLSDLLDWKRMGLEYVKA RQLALRRAYASSFSEKEDEEEDYIPGVEEKISRPFSVPGSPRVSGMMTPGDFASLQEGREGLSTEDYISWKLPEE DDTDEYFPLTLRHKQPQADKEEVEAALNGS* |
| Coding | >OphauB2|3588 ATGGCCTTTGAAGACGAGCAGCCTGTGGTTCGCGATGTCAAGAACCATTTGCTGTTTGAGGTTGCCACCGAGGTA GCTCACCGAGTGGGCGGTATCTACTCAGTCATCAAGTCCAAGGCACCCGTCACCACGGCCGAGTATGGCGACCGC TACACCCTCATCGGTCCTTTGAACCACCAGTCGGCTGCCGTCGAGGTGGAGGTTATGGAACCCACCGTTCCAGCC ATCGCCAAAACAATGCAATCCATGAAGGATCGGGGCATCAACATTGTCTATGGACGCTGGTTGATTGAGGGCGCC CCGAGAGTCATTCTCATAGATACCAAGACCGCCTATGGCTTCCTCGACGAGTGGAAAACAGACTTGTGGAACATT GCCAGCATCCCTTCGCCCCCCAGCGACGACGAGACTAACGAGACCATTGTCTTTGGCTACCTAGTTGCCTGGTTT TTGGGAGAGTTTGTCAGCCACGAAACCAAAAAGGCCGTCATTGCCCATTTCCACGAGTGGCTTGCCGGTGTTGCT CTTCCCTTGGCCAAATGCAGACGCATTGATGTTACAACCATCTTTACGACACACGCCACTCTTCTCGGCCGCTAC CTCTGTGCCGGCTCCGTCGACTTTTACAACAATCTGCAAAACTTTGATGTCGACGCCGAGGCCGGCAAGCGTGGG ATATACCATCGCTACTGCATCGAGCGCGCCGCCGCGCACTCTTGCGACGTGTTTACGACCGTCTCCCACATTACT GCTTTTGAAGCAGAGCATTTGCTCAAGCGCAAGCCTGATGGTGTTCTTCCAAACGGTCTCAACGTGACCAAGTTC TCGGCTGTTCACGAGTTTCAGAACCTGCACCAACAGGCCAAGGAAAAGATCCATGACTTTGTGCGCGGGCACTTT TACGGCCACTATGACTTTGAGCCAGAAAATACGCTCTATGTTTTTACTGCGGGCCGGTACGAGTTTCGCAACAAG GGCGTCGACATGTTTATCGAGTCACTTGCCCGCCTGAATCATCGCCTCAAGAGCGCAGGAAGCAAAATGACAATT GTGGCCTTTATCATCATGCCCGCGCAGACAACGTCGTTGACGGTTGAATCGCTCAAAGGCCAAGCCGTAATCAAG TCTCTTCGCGACACGACACATGTTATTGAGCAGAATATTGGCCGACGGTTGTTTGAGCGCTCTCTCAAATGGCAC GAAGGGGAGCCCATGCCGGATGAAAAGGACCTCATTTCGGCGCAGGACCGAGTCTTGATGCGACGGCGCCTCTTT GCCATGAAGCGACACGGTTTACCGCCAATTGTGACGCATAACATGGTCAACGATCACGACGACCCCATTCTCAAC CAGATTCGACGTGTTCAGCTCTTTAACCACCCGTCGGACCGGGTCAAGGTGGTATTCCACCCCGAGTTTCTCAAT TCGGCGAATCCAGTGCTGCCGCTCGACTATGACGACTTTGTCCGCGGTTGCCACTTGGGTGTCTTTGCATCGTAC TATGAGCCCTGGGGCTACACGCCGGCCGAATGCACCGTCATGGGCGTGCCGAGTATTACGACTAATCTATCCGGT TTCGGCTGCTACATGGAGGAGCTTATTGAAAACTCGAGCGACTACGGCATCTACATTGTGGATCGGCGATCCAAG GGAGTTGACGACTCGGTCAATCAGTTGACGACTTTTATGTTTGACTTTTGCGGCAAGAGCCAGCGGCAGCGCATC AACCAGCGGAATCGGACAGAGCGTCTCAGCGATTTGCTGGACTGGAAGCGGATGGGCCTCGAGTATGTCAAGGCT CGGCAATTGGCGCTTCGACGGGCGTATGCATCTTCATTCAGTGAGAAGGAGGACGAAGAGGAGGATTACATCCCG GGGGTTGAAGAAAAGATTTCACGTCCCTTTTCTGTGCCAGGCTCGCCGCGGGTTAGTGGCATGATGACGCCAGGC GACTTTGCCAGCCTACAAGAGGGCCGAGAGGGCCTAAGCACCGAGGACTACATTTCGTGGAAGCTGCCTGAAGAA GACGATACAGACGAATATTTCCCGCTGACGCTTCGACATAAACAGCCCCAGGCTGACAAGGAAGAGGTTGAGGCT GCTCTAAACGGTAGCTAA |
| Transcript | >OphauB2|3588 ATGGCCTTTGAAGACGAGCAGCCTGTGGTTCGCGATGTCAAGAACCATTTGCTGTTTGAGGTTGCCACCGAGGTA GCTCACCGAGTGGGCGGTATCTACTCAGTCATCAAGTCCAAGGCACCCGTCACCACGGCCGAGTATGGCGACCGC TACACCCTCATCGGTCCTTTGAACCACCAGTCGGCTGCCGTCGAGGTGGAGGTTATGGAACCCACCGTTCCAGCC ATCGCCAAAACAATGCAATCCATGAAGGATCGGGGCATCAACATTGTCTATGGACGCTGGTTGATTGAGGGCGCC CCGAGAGTCATTCTCATAGATACCAAGACCGCCTATGGCTTCCTCGACGAGTGGAAAACAGACTTGTGGAACATT GCCAGCATCCCTTCGCCCCCCAGCGACGACGAGACTAACGAGACCATTGTCTTTGGCTACCTAGTTGCCTGGTTT TTGGGAGAGTTTGTCAGCCACGAAACCAAAAAGGCCGTCATTGCCCATTTCCACGAGTGGCTTGCCGGTGTTGCT CTTCCCTTGGCCAAATGCAGACGCATTGATGTTACAACCATCTTTACGACACACGCCACTCTTCTCGGCCGCTAC CTCTGTGCCGGCTCCGTCGACTTTTACAACAATCTGCAAAACTTTGATGTCGACGCCGAGGCCGGCAAGCGTGGG ATATACCATCGCTACTGCATCGAGCGCGCCGCCGCGCACTCTTGCGACGTGTTTACGACCGTCTCCCACATTACT GCTTTTGAAGCAGAGCATTTGCTCAAGCGCAAGCCTGATGGTGTTCTTCCAAACGGTCTCAACGTGACCAAGTTC TCGGCTGTTCACGAGTTTCAGAACCTGCACCAACAGGCCAAGGAAAAGATCCATGACTTTGTGCGCGGGCACTTT TACGGCCACTATGACTTTGAGCCAGAAAATACGCTCTATGTTTTTACTGCGGGCCGGTACGAGTTTCGCAACAAG GGCGTCGACATGTTTATCGAGTCACTTGCCCGCCTGAATCATCGCCTCAAGAGCGCAGGAAGCAAAATGACAATT GTGGCCTTTATCATCATGCCCGCGCAGACAACGTCGTTGACGGTTGAATCGCTCAAAGGCCAAGCCGTAATCAAG TCTCTTCGCGACACGACACATGTTATTGAGCAGAATATTGGCCGACGGTTGTTTGAGCGCTCTCTCAAATGGCAC GAAGGGGAGCCCATGCCGGATGAAAAGGACCTCATTTCGGCGCAGGACCGAGTCTTGATGCGACGGCGCCTCTTT GCCATGAAGCGACACGGTTTACCGCCAATTGTGACGCATAACATGGTCAACGATCACGACGACCCCATTCTCAAC CAGATTCGACGTGTTCAGCTCTTTAACCACCCGTCGGACCGGGTCAAGGTGGTATTCCACCCCGAGTTTCTCAAT TCGGCGAATCCAGTGCTGCCGCTCGACTATGACGACTTTGTCCGCGGTTGCCACTTGGGTGTCTTTGCATCGTAC TATGAGCCCTGGGGCTACACGCCGGCCGAATGCACCGTCATGGGCGTGCCGAGTATTACGACTAATCTATCCGGT TTCGGCTGCTACATGGAGGAGCTTATTGAAAACTCGAGCGACTACGGCATCTACATTGTGGATCGGCGATCCAAG GGAGTTGACGACTCGGTCAATCAGTTGACGACTTTTATGTTTGACTTTTGCGGCAAGAGCCAGCGGCAGCGCATC AACCAGCGGAATCGGACAGAGCGTCTCAGCGATTTGCTGGACTGGAAGCGGATGGGCCTCGAGTATGTCAAGGCT CGGCAATTGGCGCTTCGACGGGCGTATGCATCTTCATTCAGTGAGAAGGAGGACGAAGAGGAGGATTACATCCCG GGGGTTGAAGAAAAGATTTCACGTCCCTTTTCTGTGCCAGGCTCGCCGCGGGTTAGTGGCATGATGACGCCAGGC GACTTTGCCAGCCTACAAGAGGGCCGAGAGGGCCTAAGCACCGAGGACTACATTTCGTGGAAGCTGCCTGAAGAA GACGATACAGACGAATATTTCCCGCTGACGCTTCGACATAAACAGCCCCAGGCTGACAAGGAAGAGGTTGAGGCT GCTCTAAACGGTAGCTAA |
| Gene | >OphauB2|3588 ATGGCCTTTGAAGACGAGCAGCCTGTGGTTCGCGATGTCAAGAACCATTTGCTGTTTGAGGTTGCCACCGAGGTA GCTCACCGAGGTCAGCCTCATGACGTCTTTTCTCTTTGACGCTCTGTTTACTCACTGTAACTAGTGGGCGGTATC TACTCAGTCATCAAGTCCAAGGCACCCGTCACCACGGCCGAGTATGGCGACCGCTACACCCTCATCGGTCCTTTG AACCACCAGTCGGTGCGTCGTGTTTGGCTTATTCGTCTCTCAAGTCCTCGCTGACGACACCAGGCTGCCGTCGAG GTGGAGGTTATGGAACCCACCGTTCCAGCCATCGCCAAAACAATGCAATCCATGAAGGATCGGGGCATCAACATT GTCTATGGACGCTGGTTGATTGAGGGCGCCCCGAGAGTCATTCTCATAGATACCAAGACCGCCTATGGCTTCCTC GACGAGTGGAAAACAGACTTGTGGAACATTGCCAGCATCCCTTCGCCCCCCAGCGACGACGAGACTAACGAGACC ATTGTCTTTGGCTACCTAGTTGCCTGGTTTTTGGGAGAGGTGAGGCTTTGGCTCGGCCGGCTATAATTTGGGCAG AGCTAGCAGCTAACCTTTTGATAGTTTGTCAGCCACGAAACCAAAAAGGCCGTCATTGCCCATTTCCACGAGTGG CTTGCCGGTGTTGCTCTTCCCTTGGCCAAATGCAGACGCATTGATGTTACAACCATCTTTACGACACACGCCACT CTTCTCGGCCGCTACCTCTGTGCCGGCTCCGTCGACTTTTACAACAATCTGCAAAACTTTGATGTCGACGCCGAG GCCGGCAAGCGTGGGATATACCATCGCTACTGCATCGAGCGCGCCGCCGCGCACTCTTGCGACGTGTTTACGACC GTCTCCCACATTACTGCTTTTGAAGCAGAGCATTTGCTCAAGCGCAAGCCTGATGGTGTTCTTCCAAACGGTCTC AACGTGACCAAGTTCTCGGCTGTTCACGAGTTTCAGAACCTGCACCAACAGGCCAAGGAAAAGATCCATGACTTT GTGCGCGGGCACTTTTACGGCCACTATGACTTTGAGCCAGAAAATACGCTCTATGTTTTTACTGCGGGCCGGTAC GAGTTTCGCAACAAGGGCGTCGACATGTTTATCGAGTCACTTGCCCGCCTGAATCATCGCCTCAAGAGCGCAGGA AGCAAAATGACAATTGTGGCCTTTATCATCATGCCCGCGCAGACAACGTCGTTGACGGTTGAATCGCTCAAAGGC CAAGCCGTAATCAAGTCTCTTCGCGACACGACACATGTTATTGAGCAGAATATTGGCCGACGGTTGTTTGAGCGC TCTCTCAAATGGCACGAAGGGGAGCCCATGCCGGATGAAAAGGACCTCATTTCGGCGCAGGACCGAGTCTTGATG CGACGGCGCCTCTTTGCCATGAAGCGACACGGTTTACCGCCAATTGTGACGCATAACATGGTCAACGATCACGAC GACCCCATTCTCAACCAGATTCGACGTGTTCAGCTCTTTAACCACCCGTCGGACCGGGTCAAGGTGGTATTCCAC CCCGAGTTTCTCAATTCGGCGAATCCAGTGCTGCCGCTCGACTATGACGACTTTGTCCGCGGTTGCCACTTGGGT GTCTTTGCATCGTACTATGAGCCCTGGGGCTACACGCCGGCCGAATGCACCGTCATGGGCGTGCCGAGTATTACG ACTAATCTATCCGGTTTCGGCTGCTACATGGAGGAGCTTATTGAAAACTCGAGCGACTACGGCATCTACATTGTG GATCGGCGATCCAAGGGAGTTGACGACTCGGTCAATCAGTTGACGACTTTTATGTTTGACTTTTGCGGCAAGAGC CAGCGGCAGCGCATCAACCAGCGGAATCGGACAGAGCGTCTCAGCGATTTGCTGGACTGGAAGCGGATGGGCCTC GAGTATGTCAAGGCTCGGCAATTGGCGCTTCGACGGGCGTATGCATCTTCATTCAGTGAGAAGGAGGACGAAGAG GAGGATTACATCCCGGGGGTTGAAGAAAAGATTTCACGTCCCTTTTCTGTGCCAGGCTCGCCGCGGGTTAGTGGC ATGATGACGCCAGGCGACTTTGCCAGCCTACAAGAGGGCCGAGAGGGCCTAAGCACCGAGGACTACATTTCGTGG AAGCTGCCGTAAGTAGCGAAGAGGGTTGAAAATGGTGGCGAGATGCTGACGGGGTTGAACAGTGAAGAAGACGAT ACAGACGAATATTTCCCGCTGACGCTTCGACATAAACAGCCCCAGGCTGACAAGGAAGAGGTTGAGGCTGCTCTA AACGGTAGCTAA |