Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|3566
Gene name
LocationContig_228:14988..16222
Strand+
Gene length (bp)1234
Transcript length (bp)1170
Coding sequence length (bp)1170
Protein length (aa) 390

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q12516|SRF1_YEAST Regulator of phospholipase D SRF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SRF1 PE=1 SV=1 214 366 1.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

Domain # Start End Length
1 226 248 22
2 263 282 19
3 301 323 22
4 338 360 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|3566
MWWLSRHQQAAQSSGSPKTPDSVQTSSSSYISSTIKSKPTNNQSRLPVRTVPPWIVSYEESLGPAPADQLDLLRH
PSCAHHAHHAHHAHHDLRRRVSNDSLGDGADSELAPGALVKNKFLHCLGARSRRGRKWDHLRSAETPIVPCYSVR
KPAPWGDFIRASKYPNPLGVESEITSAQQLKQLMPGFDNEPRLKPTDPTRKKAFHSDLPLYQRISNLVLRHWLSP
FLFRMIVMTTSILALGIAARIYVMEDRSERDSAERTQSLVAVVVDCVAIPFIAWMIWDEYTGKPIGLRSGVSKIR
LILLDVFFIIFKSASTGLAFESLVYHNFKAGELLRFSIVLGVFELVGLICWTMNFMINVVRTVERMGGRYDPMAD
KDREAHETDASVMV*
Coding >OphauB2|3566
ATGTGGTGGCTGTCGCGCCACCAACAAGCTGCCCAGTCGAGCGGCTCGCCAAAGACGCCAGACTCTGTGCAAACA
AGCAGCAGTAGCTACATCTCTAGCACCATCAAGTCCAAGCCCACCAACAACCAGTCGCGCTTGCCCGTCAGGACC
GTTCCTCCCTGGATTGTCTCGTACGAGGAATCGCTCGGTCCGGCCCCCGCAGATCAGCTCGACTTGCTCAGGCAT
CCATCCTGTGCTCATCATGCCCACCATGCCCACCATGCCCACCATGACCTCCGCCGTCGCGTCTCCAATGATAGT
CTGGGCGATGGTGCTGATTCGGAGCTGGCTCCAGGCGCGCTTGTCAAGAACAAGTTTCTTCACTGCCTGGGCGCT
CGGTCCAGACGTGGCAGAAAATGGGACCACTTGCGCTCTGCAGAGACTCCCATTGTTCCCTGCTACTCGGTGCGC
AAGCCCGCGCCCTGGGGCGACTTTATCCGTGCCTCCAAATACCCCAACCCGCTCGGAGTCGAGTCGGAAATCACG
AGTGCGCAGCAGCTCAAGCAACTGATGCCTGGCTTCGACAATGAGCCCAGACTAAAGCCAACTGATCCAACGCGT
AAAAAGGCTTTTCACAGCGACTTGCCTCTTTACCAGCGCATCTCAAACCTTGTTTTGCGGCATTGGCTGTCGCCT
TTTCTCTTTCGAATGATTGTCATGACTACATCCATTCTAGCGCTGGGCATAGCAGCGCGCATCTACGTGATGGAA
GATCGCTCCGAGCGAGACAGCGCCGAGCGAACACAGTCGCTAGTCGCCGTGGTGGTTGACTGTGTTGCCATTCCC
TTCATAGCGTGGATGATATGGGACGAATACACGGGCAAGCCCATTGGCCTTCGCTCCGGAGTTTCTAAGATACGG
CTCATCCTGCTAGACGTCTTTTTTATAATCTTCAAGTCGGCCAGCACAGGACTGGCCTTTGAGAGCCTCGTGTAT
CATAATTTCAAGGCGGGCGAGTTGCTGCGCTTTTCCATTGTGCTGGGCGTTTTCGAGCTGGTTGGTCTCATTTGT
TGGACCATGAATTTCATGATCAATGTTGTTCGGACTGTGGAGCGCATGGGCGGCAGATATGACCCCATGGCCGAC
AAGGACCGCGAGGCTCATGAGACGGACGCTTCAGTAATGGTTTGA
Transcript >OphauB2|3566
ATGTGGTGGCTGTCGCGCCACCAACAAGCTGCCCAGTCGAGCGGCTCGCCAAAGACGCCAGACTCTGTGCAAACA
AGCAGCAGTAGCTACATCTCTAGCACCATCAAGTCCAAGCCCACCAACAACCAGTCGCGCTTGCCCGTCAGGACC
GTTCCTCCCTGGATTGTCTCGTACGAGGAATCGCTCGGTCCGGCCCCCGCAGATCAGCTCGACTTGCTCAGGCAT
CCATCCTGTGCTCATCATGCCCACCATGCCCACCATGCCCACCATGACCTCCGCCGTCGCGTCTCCAATGATAGT
CTGGGCGATGGTGCTGATTCGGAGCTGGCTCCAGGCGCGCTTGTCAAGAACAAGTTTCTTCACTGCCTGGGCGCT
CGGTCCAGACGTGGCAGAAAATGGGACCACTTGCGCTCTGCAGAGACTCCCATTGTTCCCTGCTACTCGGTGCGC
AAGCCCGCGCCCTGGGGCGACTTTATCCGTGCCTCCAAATACCCCAACCCGCTCGGAGTCGAGTCGGAAATCACG
AGTGCGCAGCAGCTCAAGCAACTGATGCCTGGCTTCGACAATGAGCCCAGACTAAAGCCAACTGATCCAACGCGT
AAAAAGGCTTTTCACAGCGACTTGCCTCTTTACCAGCGCATCTCAAACCTTGTTTTGCGGCATTGGCTGTCGCCT
TTTCTCTTTCGAATGATTGTCATGACTACATCCATTCTAGCGCTGGGCATAGCAGCGCGCATCTACGTGATGGAA
GATCGCTCCGAGCGAGACAGCGCCGAGCGAACACAGTCGCTAGTCGCCGTGGTGGTTGACTGTGTTGCCATTCCC
TTCATAGCGTGGATGATATGGGACGAATACACGGGCAAGCCCATTGGCCTTCGCTCCGGAGTTTCTAAGATACGG
CTCATCCTGCTAGACGTCTTTTTTATAATCTTCAAGTCGGCCAGCACAGGACTGGCCTTTGAGAGCCTCGTGTAT
CATAATTTCAAGGCGGGCGAGTTGCTGCGCTTTTCCATTGTGCTGGGCGTTTTCGAGCTGGTTGGTCTCATTTGT
TGGACCATGAATTTCATGATCAATGTTGTTCGGACTGTGGAGCGCATGGGCGGCAGATATGACCCCATGGCCGAC
AAGGACCGCGAGGCTCATGAGACGGACGCTTCAGTAATGGTTTGA
Gene >OphauB2|3566
ATGTGGTGGCTGTCGCGCCACCAACAAGCTGCCCAGTCGAGCGGCTCGCCAAAGACGCCAGACTCTGTGCAAACA
AGCAGCAGTAGCTACATCTCTAGCACCATCAAGTCCAAGCCCACCAACAACCAGTCGCGCTTGCCCGTCAGGACC
GTTCCTCGTGCGTCGTTGCACCTGCACCTCGTGTGTCACGCTGTCATGGCCCTGAGCTAACGCTGTGGCAGCCTG
GATTGTCTCGTACGAGGAATCGCTCGGTCCGGCCCCCGCAGATCAGCTCGACTTGCTCAGGCATCCATCCTGTGC
TCATCATGCCCACCATGCCCACCATGCCCACCATGACCTCCGCCGTCGCGTCTCCAATGATAGTCTGGGCGATGG
TGCTGATTCGGAGCTGGCTCCAGGCGCGCTTGTCAAGAACAAGTTTCTTCACTGCCTGGGCGCTCGGTCCAGACG
TGGCAGAAAATGGGACCACTTGCGCTCTGCAGAGACTCCCATTGTTCCCTGCTACTCGGTGCGCAAGCCCGCGCC
CTGGGGCGACTTTATCCGTGCCTCCAAATACCCCAACCCGCTCGGAGTCGAGTCGGAAATCACGAGTGCGCAGCA
GCTCAAGCAACTGATGCCTGGCTTCGACAATGAGCCCAGACTAAAGCCAACTGATCCAACGCGTAAAAAGGCTTT
TCACAGCGACTTGCCTCTTTACCAGCGCATCTCAAACCTTGTTTTGCGGCATTGGCTGTCGCCTTTTCTCTTTCG
AATGATTGTCATGACTACATCCATTCTAGCGCTGGGCATAGCAGCGCGCATCTACGTGATGGAAGATCGCTCCGA
GCGAGACAGCGCCGAGCGAACACAGTCGCTAGTCGCCGTGGTGGTTGACTGTGTTGCCATTCCCTTCATAGCGTG
GATGATATGGGACGAATACACGGGCAAGCCCATTGGCCTTCGCTCCGGAGTTTCTAAGATACGGCTCATCCTGCT
AGACGTCTTTTTTATAATCTTCAAGTCGGCCAGCACAGGACTGGCCTTTGAGAGCCTCGTGTATCATAATTTCAA
GGCGGGCGAGTTGCTGCGCTTTTCCATTGTGCTGGGCGTTTTCGAGCTGGTTGGTCTCATTTGTTGGACCATGAA
TTTCATGATCAATGTTGTTCGGACTGTGGAGCGCATGGGCGGCAGATATGACCCCATGGCCGACAAGGACCGCGA
GGCTCATGAGACGGACGCTTCAGTAATGGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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