Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|3563
Gene name
LocationContig_228:8357..10193
Strand-
Gene length (bp)1836
Transcript length (bp)1836
Coding sequence length (bp)1836
Protein length (aa) 612

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9NWF9|RN216_HUMAN E3 ubiquitin-protein ligase RNF216 OS=Homo sapiens GN=RNF216 PE=1 SV=3 427 547 6.0E-24
sp|P58283|RN216_MOUSE E3 ubiquitin-protein ligase RNF216 OS=Mus musculus GN=Rnf216 PE=1 SV=3 427 547 8.0E-24
sp|P58283|RN216_MOUSE E3 ubiquitin-protein ligase RNF216 OS=Mus musculus GN=Rnf216 PE=1 SV=3 208 290 1.0E-06
sp|Q9NWF9|RN216_HUMAN E3 ubiquitin-protein ligase RNF216 OS=Homo sapiens GN=RNF216 PE=1 SV=3 208 290 1.0E-05

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 372 394 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|3563
MADDTYICDEAQLGRVCEARPDLRELNANLEALAAVFPDVQIEVFRELLSKFDGESRLALVADAMLKSRVEWVKG
RWRTAGDEGDEGVPAGQRFRSDEYRRAVRRLAWSEFRGLSRSTINAVLAENNFGYLEARPTLVALSAKSWRFALH
SVFWRRAKPAAAQAGQHHPLLVWRSSGKGGMVPAVRATGSAELDGDLFDALVRPVQTQLVRQRSEADAQLAAQVN
AREAEAADALLECACCFCAAPFERVASCVRCGQLLCFACVQRAVREALFGQGWSSIDVQRGSLRCMALEACSGFV
PAEQMRRALDSSDDDQDLAARLDGRLAEQCLAACTLPLIHCPFCPYAEIDDIWTPAHQTLPALRPEKAYRLVLLA
LGLVCLLAALPLALMLALAALVLSTRHALARLLSSHYHAALGRHARRRRGPRFTCLNPSCRRSSCLACHKSWSDP
HTCHESSLVALRTQVEQAMSLAIKRVCPRCNTSFVKTAGCNKLTCPCGYKMCYVCRADLSVIGYRHFCDHFRPDA
DAAPCTDCERCNLWQTEDVDSVLRQARDDAERRWREALREHDEELGASLGRPVAPLGVRALAARVLSGSVPALED
VVDVLVDGLYT*
Coding >OphauB2|3563
ATGGCAGACGATACGTACATATGCGACGAGGCGCAGCTGGGCCGGGTTTGCGAGGCACGGCCAGACCTACGCGAG
CTGAATGCCAATCTGGAAGCGCTGGCGGCGGTGTTTCCCGATGTGCAGATTGAAGTGTTTCGCGAGCTGCTGAGC
AAGTTTGACGGCGAGTCGCGGCTGGCGCTGGTGGCGGATGCCATGCTCAAGAGCCGAGTGGAATGGGTCAAGGGG
CGATGGCGGACAGCGGGCGACGAGGGCGACGAGGGCGTGCCGGCAGGCCAGCGCTTCCGCAGCGACGAGTACCGA
CGGGCAGTGCGGCGGCTAGCATGGAGCGAGTTTCGCGGCCTGTCACGGTCCACCATCAACGCCGTCTTGGCGGAG
AACAACTTTGGCTACCTGGAAGCGCGTCCCACGCTCGTGGCCCTATCCGCCAAGTCGTGGCGCTTTGCCCTTCAC
TCCGTCTTTTGGCGACGGGCCAAACCAGCCGCCGCTCAGGCTGGCCAGCACCACCCGCTCCTGGTGTGGCGCTCG
TCGGGCAAGGGCGGCATGGTGCCAGCAGTACGGGCCACGGGCAGCGCCGAACTAGACGGCGACTTGTTTGACGCG
CTGGTGCGCCCCGTGCAGACGCAGCTGGTGCGGCAGCGCTCCGAGGCGGACGCGCAGCTGGCGGCGCAGGTGAAT
GCGCGCGAGGCCGAGGCGGCAGACGCGCTGCTCGAGTGTGCGTGCTGCTTTTGCGCGGCGCCGTTTGAGCGCGTG
GCGAGCTGTGTGCGCTGTGGACAGCTGCTGTGCTTTGCCTGTGTGCAGCGGGCGGTGCGCGAGGCGCTCTTTGGC
CAGGGCTGGAGCAGCATTGATGTGCAGCGCGGCTCCTTGCGCTGCATGGCGCTCGAGGCGTGTAGCGGCTTTGTG
CCGGCGGAGCAGATGCGGCGCGCCCTCGACAGCAGCGACGACGACCAAGACTTGGCGGCGCGCCTTGATGGGCGG
CTGGCGGAGCAGTGTCTGGCGGCCTGCACGCTGCCCCTTATCCACTGCCCCTTTTGCCCCTATGCCGAGATTGAC
GACATTTGGACGCCCGCGCACCAGACGCTGCCTGCGCTGCGACCTGAAAAGGCCTACCGTCTGGTGCTGCTGGCT
CTTGGGCTGGTCTGTCTGCTTGCCGCGCTCCCCCTCGCCCTCATGCTCGCCCTGGCCGCTCTCGTCTTGTCCACG
CGCCACGCCCTCGCCCGCCTCTTGTCCAGCCACTACCACGCCGCCCTTGGCCGCCACGCCCGTCGCCGCCGCGGC
CCTCGCTTCACCTGCCTCAACCCCTCTTGCCGCCGCTCCTCATGCCTCGCCTGCCACAAATCCTGGTCCGACCCC
CACACCTGCCACGAATCCTCCCTCGTTGCCCTGCGCACCCAAGTCGAGCAGGCCATGAGCCTCGCCATCAAGCGC
GTCTGCCCCCGCTGCAACACGTCGTTTGTCAAGACGGCTGGCTGCAACAAGCTCACCTGTCCCTGCGGCTACAAA
ATGTGCTACGTCTGCCGCGCAGACTTGAGCGTCATTGGCTACCGCCACTTTTGCGACCACTTTCGCCCCGACGCC
GACGCCGCCCCTTGCACAGACTGCGAGCGCTGCAATCTCTGGCAAACAGAAGATGTTGACTCGGTCCTGCGCCAG
GCTCGTGACGATGCCGAGCGCCGCTGGAGAGAGGCCCTGCGCGAGCACGATGAGGAGCTGGGCGCTAGCCTGGGT
AGGCCAGTGGCGCCGCTGGGGGTGAGGGCGTTGGCTGCGCGCGTGTTGAGTGGGTCGGTGCCGGCGCTGGAGGAT
GTGGTGGATGTGCTGGTGGATGGGCTGTATACATGA
Transcript >OphauB2|3563
ATGGCAGACGATACGTACATATGCGACGAGGCGCAGCTGGGCCGGGTTTGCGAGGCACGGCCAGACCTACGCGAG
CTGAATGCCAATCTGGAAGCGCTGGCGGCGGTGTTTCCCGATGTGCAGATTGAAGTGTTTCGCGAGCTGCTGAGC
AAGTTTGACGGCGAGTCGCGGCTGGCGCTGGTGGCGGATGCCATGCTCAAGAGCCGAGTGGAATGGGTCAAGGGG
CGATGGCGGACAGCGGGCGACGAGGGCGACGAGGGCGTGCCGGCAGGCCAGCGCTTCCGCAGCGACGAGTACCGA
CGGGCAGTGCGGCGGCTAGCATGGAGCGAGTTTCGCGGCCTGTCACGGTCCACCATCAACGCCGTCTTGGCGGAG
AACAACTTTGGCTACCTGGAAGCGCGTCCCACGCTCGTGGCCCTATCCGCCAAGTCGTGGCGCTTTGCCCTTCAC
TCCGTCTTTTGGCGACGGGCCAAACCAGCCGCCGCTCAGGCTGGCCAGCACCACCCGCTCCTGGTGTGGCGCTCG
TCGGGCAAGGGCGGCATGGTGCCAGCAGTACGGGCCACGGGCAGCGCCGAACTAGACGGCGACTTGTTTGACGCG
CTGGTGCGCCCCGTGCAGACGCAGCTGGTGCGGCAGCGCTCCGAGGCGGACGCGCAGCTGGCGGCGCAGGTGAAT
GCGCGCGAGGCCGAGGCGGCAGACGCGCTGCTCGAGTGTGCGTGCTGCTTTTGCGCGGCGCCGTTTGAGCGCGTG
GCGAGCTGTGTGCGCTGTGGACAGCTGCTGTGCTTTGCCTGTGTGCAGCGGGCGGTGCGCGAGGCGCTCTTTGGC
CAGGGCTGGAGCAGCATTGATGTGCAGCGCGGCTCCTTGCGCTGCATGGCGCTCGAGGCGTGTAGCGGCTTTGTG
CCGGCGGAGCAGATGCGGCGCGCCCTCGACAGCAGCGACGACGACCAAGACTTGGCGGCGCGCCTTGATGGGCGG
CTGGCGGAGCAGTGTCTGGCGGCCTGCACGCTGCCCCTTATCCACTGCCCCTTTTGCCCCTATGCCGAGATTGAC
GACATTTGGACGCCCGCGCACCAGACGCTGCCTGCGCTGCGACCTGAAAAGGCCTACCGTCTGGTGCTGCTGGCT
CTTGGGCTGGTCTGTCTGCTTGCCGCGCTCCCCCTCGCCCTCATGCTCGCCCTGGCCGCTCTCGTCTTGTCCACG
CGCCACGCCCTCGCCCGCCTCTTGTCCAGCCACTACCACGCCGCCCTTGGCCGCCACGCCCGTCGCCGCCGCGGC
CCTCGCTTCACCTGCCTCAACCCCTCTTGCCGCCGCTCCTCATGCCTCGCCTGCCACAAATCCTGGTCCGACCCC
CACACCTGCCACGAATCCTCCCTCGTTGCCCTGCGCACCCAAGTCGAGCAGGCCATGAGCCTCGCCATCAAGCGC
GTCTGCCCCCGCTGCAACACGTCGTTTGTCAAGACGGCTGGCTGCAACAAGCTCACCTGTCCCTGCGGCTACAAA
ATGTGCTACGTCTGCCGCGCAGACTTGAGCGTCATTGGCTACCGCCACTTTTGCGACCACTTTCGCCCCGACGCC
GACGCCGCCCCTTGCACAGACTGCGAGCGCTGCAATCTCTGGCAAACAGAAGATGTTGACTCGGTCCTGCGCCAG
GCTCGTGACGATGCCGAGCGCCGCTGGAGAGAGGCCCTGCGCGAGCACGATGAGGAGCTGGGCGCTAGCCTGGGT
AGGCCAGTGGCGCCGCTGGGGGTGAGGGCGTTGGCTGCGCGCGTGTTGAGTGGGTCGGTGCCGGCGCTGGAGGAT
GTGGTGGATGTGCTGGTGGATGGGCTGTATACATGA
Gene >OphauB2|3563
ATGGCAGACGATACGTACATATGCGACGAGGCGCAGCTGGGCCGGGTTTGCGAGGCACGGCCAGACCTACGCGAG
CTGAATGCCAATCTGGAAGCGCTGGCGGCGGTGTTTCCCGATGTGCAGATTGAAGTGTTTCGCGAGCTGCTGAGC
AAGTTTGACGGCGAGTCGCGGCTGGCGCTGGTGGCGGATGCCATGCTCAAGAGCCGAGTGGAATGGGTCAAGGGG
CGATGGCGGACAGCGGGCGACGAGGGCGACGAGGGCGTGCCGGCAGGCCAGCGCTTCCGCAGCGACGAGTACCGA
CGGGCAGTGCGGCGGCTAGCATGGAGCGAGTTTCGCGGCCTGTCACGGTCCACCATCAACGCCGTCTTGGCGGAG
AACAACTTTGGCTACCTGGAAGCGCGTCCCACGCTCGTGGCCCTATCCGCCAAGTCGTGGCGCTTTGCCCTTCAC
TCCGTCTTTTGGCGACGGGCCAAACCAGCCGCCGCTCAGGCTGGCCAGCACCACCCGCTCCTGGTGTGGCGCTCG
TCGGGCAAGGGCGGCATGGTGCCAGCAGTACGGGCCACGGGCAGCGCCGAACTAGACGGCGACTTGTTTGACGCG
CTGGTGCGCCCCGTGCAGACGCAGCTGGTGCGGCAGCGCTCCGAGGCGGACGCGCAGCTGGCGGCGCAGGTGAAT
GCGCGCGAGGCCGAGGCGGCAGACGCGCTGCTCGAGTGTGCGTGCTGCTTTTGCGCGGCGCCGTTTGAGCGCGTG
GCGAGCTGTGTGCGCTGTGGACAGCTGCTGTGCTTTGCCTGTGTGCAGCGGGCGGTGCGCGAGGCGCTCTTTGGC
CAGGGCTGGAGCAGCATTGATGTGCAGCGCGGCTCCTTGCGCTGCATGGCGCTCGAGGCGTGTAGCGGCTTTGTG
CCGGCGGAGCAGATGCGGCGCGCCCTCGACAGCAGCGACGACGACCAAGACTTGGCGGCGCGCCTTGATGGGCGG
CTGGCGGAGCAGTGTCTGGCGGCCTGCACGCTGCCCCTTATCCACTGCCCCTTTTGCCCCTATGCCGAGATTGAC
GACATTTGGACGCCCGCGCACCAGACGCTGCCTGCGCTGCGACCTGAAAAGGCCTACCGTCTGGTGCTGCTGGCT
CTTGGGCTGGTCTGTCTGCTTGCCGCGCTCCCCCTCGCCCTCATGCTCGCCCTGGCCGCTCTCGTCTTGTCCACG
CGCCACGCCCTCGCCCGCCTCTTGTCCAGCCACTACCACGCCGCCCTTGGCCGCCACGCCCGTCGCCGCCGCGGC
CCTCGCTTCACCTGCCTCAACCCCTCTTGCCGCCGCTCCTCATGCCTCGCCTGCCACAAATCCTGGTCCGACCCC
CACACCTGCCACGAATCCTCCCTCGTTGCCCTGCGCACCCAAGTCGAGCAGGCCATGAGCCTCGCCATCAAGCGC
GTCTGCCCCCGCTGCAACACGTCGTTTGTCAAGACGGCTGGCTGCAACAAGCTCACCTGTCCCTGCGGCTACAAA
ATGTGCTACGTCTGCCGCGCAGACTTGAGCGTCATTGGCTACCGCCACTTTTGCGACCACTTTCGCCCCGACGCC
GACGCCGCCCCTTGCACAGACTGCGAGCGCTGCAATCTCTGGCAAACAGAAGATGTTGACTCGGTCCTGCGCCAG
GCTCGTGACGATGCCGAGCGCCGCTGGAGAGAGGCCCTGCGCGAGCACGATGAGGAGCTGGGCGCTAGCCTGGGT
AGGCCAGTGGCGCCGCTGGGGGTGAGGGCGTTGGCTGCGCGCGTGTTGAGTGGGTCGGTGCCGGCGCTGGAGGAT
GTGGTGGATGTGCTGGTGGATGGGCTGTATACATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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