© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|3527 |
| Gene name | |
| Location | Contig_223:4977..5453 |
| Strand | - |
| Gene length (bp) | 476 |
| Transcript length (bp) | 342 |
| Coding sequence length (bp) | 342 |
| Protein length (aa) | 114 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF11779 | SPT_ssu-like | Small subunit of serine palmitoyltransferase-like | 1.1E-22 | 9 | 61 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 33 | 55 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|3527 MALLAGLRRWLHRKQYLFEVTFGVYMYTPWEKFAVYSILFLLCGLAFIAAILYLPHHIFTLAGRAWYYIKGDDID VAASARHVVKEITASVLSESRPTAARVSEALGALDKEL* |
| Coding | >OphauB2|3527 ATGGCGCTGCTGGCGGGCTTGAGGAGATGGCTGCACCGCAAGCAGTACCTGTTTGAGGTTACATTTGGCGTCTAC ATGTACACGCCGTGGGAAAAGTTTGCCGTCTATTCCATCCTCTTCCTCCTCTGCGGCCTGGCCTTTATCGCTGCG ATTCTCTACCTGCCGCACCACATCTTTACGCTTGCCGGCCGTGCGTGGTACTACATCAAGGGCGACGACATTGAC GTGGCTGCATCGGCACGGCACGTTGTCAAGGAAATCACAGCAAGCGTGCTCAGCGAGTCGCGGCCCACGGCGGCG CGTGTCAGCGAGGCTCTCGGCGCGCTGGACAAGGAACTCTGA |
| Transcript | >OphauB2|3527 ATGGCGCTGCTGGCGGGCTTGAGGAGATGGCTGCACCGCAAGCAGTACCTGTTTGAGGTTACATTTGGCGTCTAC ATGTACACGCCGTGGGAAAAGTTTGCCGTCTATTCCATCCTCTTCCTCCTCTGCGGCCTGGCCTTTATCGCTGCG ATTCTCTACCTGCCGCACCACATCTTTACGCTTGCCGGCCGTGCGTGGTACTACATCAAGGGCGACGACATTGAC GTGGCTGCATCGGCACGGCACGTTGTCAAGGAAATCACAGCAAGCGTGCTCAGCGAGTCGCGGCCCACGGCGGCG CGTGTCAGCGAGGCTCTCGGCGCGCTGGACAAGGAACTCTGA |
| Gene | >OphauB2|3527 ATGGCGCTGCTGGCGGGCTTGAGGAGATGGCTGCACCGCAAGCAGTACCTGTTTGAGGTTACATTTGGCGTCTAC ATGTACACGCCGTGGGAAAAGTTTGCCGTCTGTGAGTCTTTGCGAGAGAAATATTTGTCGAGGCTTGGGCCAAGT GCAAAAACCTGGTTGGAGGGGGGGGGCGGAAGCCGAGAAAAAAAAAGGGGGCAGGCATGTAATACTTACTCGAGC GCGCTTCTCTACCAGATTCCATCCTCTTCCTCCTCTGCGGCCTGGCCTTTATCGCTGCGATTCTCTACCTGCCGC ACCACATCTTTACGCTTGCCGGCCGTGCGTGGTACTACATCAAGGGCGACGACATTGACGTGGCTGCATCGGCAC GGCACGTTGTCAAGGAAATCACAGCAAGCGTGCTCAGCGAGTCGCGGCCCACGGCGGCGCGTGTCAGCGAGGCTC TCGGCGCGCTGGACAAGGAACTCTGA |