Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|3492
Gene name
LocationContig_22:199257..199899
Strand-
Gene length (bp)642
Transcript length (bp)522
Coding sequence length (bp)522
Protein length (aa) 174

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01476 LysM LysM domain 4.3E-06 96 134

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|3492
MMPARLMVHGAFLLLFANRVLSSARANSSTLLQSTPTALPDSTHIVPSTYSQIVASIQPAVDTSRHVPSAADETL
QNMPRAASKPTKRSECLGIRYTVQAGDSCNSISHSSKVATDRIVELNHLDYDCATLTPGIDLCLEGPCELHVVGQ
NDTCASIVGGRGFSRIQLVSWNP*
Coding >OphauB2|3492
ATGATGCCGGCACGCCTCATGGTTCACGGCGCGTTTCTCCTGCTCTTTGCGAATAGAGTCCTCTCTTCAGCAAGG
GCGAATTCCAGCACCCTGCTCCAATCCACACCAACCGCCCTGCCCGACTCTACACACATTGTTCCTAGCACTTAT
AGTCAGATAGTCGCTTCCATACAGCCTGCTGTGGATACAAGCCGCCATGTCCCCAGCGCGGCAGATGAGACGTTG
CAAAACATGCCACGCGCAGCCTCGAAGCCCACAAAACGAAGCGAATGCCTCGGCATCCGGTACACGGTCCAGGCG
GGAGACTCATGCAACTCCATTTCGCACAGCTCCAAGGTTGCGACGGACCGCATTGTTGAGCTTAACCACCTCGAC
TACGACTGCGCGACGCTGACGCCCGGCATCGACTTGTGTCTCGAGGGGCCCTGCGAGCTGCACGTTGTTGGGCAA
AACGATACTTGCGCGAGCATCGTTGGCGGCAGGGGGTTTAGCAGAATTCAGCTCGTGTCGTGGAACCCGTAA
Transcript >OphauB2|3492
ATGATGCCGGCACGCCTCATGGTTCACGGCGCGTTTCTCCTGCTCTTTGCGAATAGAGTCCTCTCTTCAGCAAGG
GCGAATTCCAGCACCCTGCTCCAATCCACACCAACCGCCCTGCCCGACTCTACACACATTGTTCCTAGCACTTAT
AGTCAGATAGTCGCTTCCATACAGCCTGCTGTGGATACAAGCCGCCATGTCCCCAGCGCGGCAGATGAGACGTTG
CAAAACATGCCACGCGCAGCCTCGAAGCCCACAAAACGAAGCGAATGCCTCGGCATCCGGTACACGGTCCAGGCG
GGAGACTCATGCAACTCCATTTCGCACAGCTCCAAGGTTGCGACGGACCGCATTGTTGAGCTTAACCACCTCGAC
TACGACTGCGCGACGCTGACGCCCGGCATCGACTTGTGTCTCGAGGGGCCCTGCGAGCTGCACGTTGTTGGGCAA
AACGATACTTGCGCGAGCATCGTTGGCGGCAGGGGGTTTAGCAGAATTCAGCTCGTGTCGTGGAACCCGTAA
Gene >OphauB2|3492
ATGATGCCGGCACGCCTCATGGTTCACGGCGCGTTTCTCCTGCTCTTTGCGAATAGAGTCCTCTCTTCAGCAAGG
GCGAATTCCAGCACCCTGCTCCAATCCACACCAACCGCCCTGCCCGACTCTACACACATTGTTCCTAGCACTTAT
AGTCAGATAGTCGCTTCCATACAGCCTGCTGTGGATACAAGCCGCCATGTCCCCAGCGCGGCAGATGAGACGTTG
CAAAACATGCCACGGTGAGTTTTTTCTTCTCCATCCTGAAACAAATCTTTTTTTTTCTTTTTTTCTTCTCTCTCT
CCCCTCCCTCACAAGCAAAGCAACTGCTAGCACGCGCTTAACACCTGCCCGCCTATTAGCGCAGCCTCGAAGCCC
ACAAAACGAAGCGAATGCCTCGGCATCCGGTACACGGTCCAGGCGGGAGACTCATGCAACTCCATTTCGCACAGC
TCCAAGGTTGCGACGGACCGCATTGTTGAGCTTAACCACCTCGACTACGACTGCGCGACGCTGACGCCCGGCATC
GACTTGTGTCTCGAGGGGCCCTGCGAGCTGCACGTTGTTGGGCAAAACGATACTTGCGCGAGCATCGTTGGCGGC
AGGGGGTTTAGCAGAATTCAGCTCGTGTCGTGGAACCCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail