Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|3490
Gene name
LocationContig_22:194129..195136
Strand-
Gene length (bp)1007
Transcript length (bp)849
Coding sequence length (bp)849
Protein length (aa) 283

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00704 Glyco_hydro_18 Glycosyl hydrolases family 18 2.6E-11 7 207

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q5AKZ3|CHI5_CANAL Probable chitinase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CaO19.12451 PE=3 SV=1 30 206 2.0E-08

GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0071704 organic substance metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 15 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|3490
MQPHHAEDHLSFLDELRNRFDTQDTRWTLSVTLTASKIWLDQFPLKGMKHHVNWFNLKTGDSDESKDGQQPLLRG
HMDMSEIKQSIHLLQDNDVDLNNVALGMLLYGHAFILDNHSCIHPDGTCKYSATRKSSCSAQPGMLSYAELLSRN
ESQEAQVYHSSSKLFKYTVFEDDTWAAFDDATTWAAKKALMHSLGMGGLGLWWLNHDNGRFEAMSELLGDFSSLQ
LKGGSATPQERKSLAEPMAAFTGQDCFATAQCTDGSLGQRGAEQTHLLSSERHAQEL*
Coding >OphauB2|3490
ATGCAGCCCCATCATGCCGAAGACCACTTGAGCTTTCTGGATGAGCTACGGAATCGATTCGACACTCAAGATACT
CGCTGGACGCTATCCGTTACCCTGACGGCTAGTAAAATCTGGCTGGACCAGTTTCCGCTCAAGGGCATGAAGCAC
CACGTCAACTGGTTCAATCTTAAGACTGGTGACTCGGACGAGAGCAAAGACGGCCAACAGCCTCTCTTACGGGGC
CACATGGACATGTCTGAAATCAAGCAGAGCATCCACCTCTTGCAAGACAATGACGTCGACTTGAACAATGTCGCC
CTCGGGATGCTGCTCTACGGCCATGCCTTTATCCTCGACAACCACAGCTGCATCCACCCAGACGGCACGTGCAAG
TACTCTGCGACGAGAAAGAGCTCCTGCTCCGCGCAACCGGGCATGCTAAGCTACGCGGAGCTCCTCTCGCGCAAC
GAGAGCCAAGAGGCCCAAGTCTACCACTCGTCGTCCAAGCTCTTCAAATACACCGTCTTTGAGGACGACACGTGG
GCCGCCTTTGACGACGCGACAACATGGGCGGCGAAAAAGGCGCTCATGCACAGCCTGGGCATGGGCGGCCTGGGG
CTCTGGTGGCTCAACCACGACAACGGGCGCTTCGAGGCCATGAGCGAGCTGCTCGGCGACTTTTCCAGCCTGCAA
CTCAAGGGCGGCAGCGCGACGCCACAGGAGCGCAAAAGCCTGGCGGAGCCAATGGCCGCCTTTACGGGCCAAGAC
TGCTTCGCCACGGCGCAGTGTACAGACGGGTCGCTGGGGCAACGGGGCGCGGAGCAGACACATTTGCTGTCCTCG
GAGCGCCATGCCCAAGAACTGTGA
Transcript >OphauB2|3490
ATGCAGCCCCATCATGCCGAAGACCACTTGAGCTTTCTGGATGAGCTACGGAATCGATTCGACACTCAAGATACT
CGCTGGACGCTATCCGTTACCCTGACGGCTAGTAAAATCTGGCTGGACCAGTTTCCGCTCAAGGGCATGAAGCAC
CACGTCAACTGGTTCAATCTTAAGACTGGTGACTCGGACGAGAGCAAAGACGGCCAACAGCCTCTCTTACGGGGC
CACATGGACATGTCTGAAATCAAGCAGAGCATCCACCTCTTGCAAGACAATGACGTCGACTTGAACAATGTCGCC
CTCGGGATGCTGCTCTACGGCCATGCCTTTATCCTCGACAACCACAGCTGCATCCACCCAGACGGCACGTGCAAG
TACTCTGCGACGAGAAAGAGCTCCTGCTCCGCGCAACCGGGCATGCTAAGCTACGCGGAGCTCCTCTCGCGCAAC
GAGAGCCAAGAGGCCCAAGTCTACCACTCGTCGTCCAAGCTCTTCAAATACACCGTCTTTGAGGACGACACGTGG
GCCGCCTTTGACGACGCGACAACATGGGCGGCGAAAAAGGCGCTCATGCACAGCCTGGGCATGGGCGGCCTGGGG
CTCTGGTGGCTCAACCACGACAACGGGCGCTTCGAGGCCATGAGCGAGCTGCTCGGCGACTTTTCCAGCCTGCAA
CTCAAGGGCGGCAGCGCGACGCCACAGGAGCGCAAAAGCCTGGCGGAGCCAATGGCCGCCTTTACGGGCCAAGAC
TGCTTCGCCACGGCGCAGTGTACAGACGGGTCGCTGGGGCAACGGGGCGCGGAGCAGACACATTTGCTGTCCTCG
GAGCGCCATGCCCAAGAACTGTGA
Gene >OphauB2|3490
ATGCAGCCCCATCATGCCGAAGACCACTTGAGCTTTCTGGATGAGCTACGGAATCGATTCGACACTCAAGATACT
CGCTGGACGCTATCCGTTACCCTGACGGCTAGTAAAATCTGGCTGGACCAGTTTCCGCTCAAGGGCATGAAGCAC
CACGTCAACTGGTTCAATCTTAAGACTGGTGACTCGGTAAGCCCCTTGGCTCACCTCAAGACAAAATCAAGTGGA
AAATTGACGGTGAGAGCAAAGGACGAGAGCAAAGACGGCCAACAGCCTCTCTTACGGGGCCACATGGACATGTCT
GAAATCAAGCAGAGCATCCACCTCTTGCAAGACAATGACGTCGACTTGAACAATGTCGCCCTCGGGATGCTGCTC
TACGGCCATGCCTTTATCCTCGACAACCACAGCTGCATCCACCCAGACGGCACGTGCAAGTACTCTGCGACGAGA
AAGAGCTCCTGCTCCGCGCAACCGGGCATGCTAAGCTACGCGGAGCTCCTCTCGCGCAACGAGAGCCAAGAGGCC
CAAGTCTACCACTCGTCGTCCAAGCTCTTCAAATACACCGTCTTTGAGGACGACACGTGGGCCGCCTTTGACGAC
GCGACAACATGGGCGGCGAAAAAGGCGCTCATGCACAGCCTGGGCATGGGCGGCCTGGGGCTCTGGTGGCTCAAC
CACGACAACGGGCGCTTCGAGGCCATGAGCGAGCTGCTCGGCGACTTTTCCAGCCTGCAACTCAAGGGCGGCAGC
GCGACGCCACAGGAGCGCAAAAGCCTGGCGGAGCCAATGGCCGCCTTTACGGGCCAAGACTGCTTCGCCACGGCG
CAGTGTACAGACGGGTCGCTGGGGCAACGGGGCGCGGAGCAGGTCTGTCCGAGCGGCTTCCTGTCCGTTGCCACG
GCGCACATGCCGCTGCAGGCGCCGAGTCGCAAGCTGGCGGACAAGTGTGCGCAAAACTGGTACAGACACATTTGC
TGTCCTCGGAGCGCCATGCCCAAGAACTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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