Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|3490
Gene name
Location	Contig_22:194129..195136
Strand	-
Gene length (bp)	1007
Transcript length (bp)	849
Coding sequence length (bp)	849
Protein length (aa)	283

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00704	Glyco_hydro_18	Glycosyl hydrolases family 18	2.6E-11	7	207

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q5AKZ3\|CHI5_CANAL	Probable chitinase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CaO19.12451 PE=3 SV=1	30	206	2.0E-08

GO

GO Term	Description	Terminal node
GO:0005975	carbohydrate metabolic process	Yes
GO:0044238	primary metabolic process	No
GO:0008152	metabolic process	No
GO:0008150	biological_process	No
GO:0071704	organic substance metabolic process	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 15	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|3490 MQPHHAEDHLSFLDELRNRFDTQDTRWTLSVTLTASKIWLDQFPLKGMKHHVNWFNLKTGDSDESKDGQQPLLRG HMDMSEIKQSIHLLQDNDVDLNNVALGMLLYGHAFILDNHSCIHPDGTCKYSATRKSSCSAQPGMLSYAELLSRN ESQEAQVYHSSSKLFKYTVFEDDTWAAFDDATTWAAKKALMHSLGMGGLGLWWLNHDNGRFEAMSELLGDFSSLQ LKGGSATPQERKSLAEPMAAFTGQDCFATAQCTDGSLGQRGAEQTHLLSSERHAQEL*
Coding	>OphauB2\|3490 ATGCAGCCCCATCATGCCGAAGACCACTTGAGCTTTCTGGATGAGCTACGGAATCGATTCGACACTCAAGATACT CGCTGGACGCTATCCGTTACCCTGACGGCTAGTAAAATCTGGCTGGACCAGTTTCCGCTCAAGGGCATGAAGCAC CACGTCAACTGGTTCAATCTTAAGACTGGTGACTCGGACGAGAGCAAAGACGGCCAACAGCCTCTCTTACGGGGC CACATGGACATGTCTGAAATCAAGCAGAGCATCCACCTCTTGCAAGACAATGACGTCGACTTGAACAATGTCGCC CTCGGGATGCTGCTCTACGGCCATGCCTTTATCCTCGACAACCACAGCTGCATCCACCCAGACGGCACGTGCAAG TACTCTGCGACGAGAAAGAGCTCCTGCTCCGCGCAACCGGGCATGCTAAGCTACGCGGAGCTCCTCTCGCGCAAC GAGAGCCAAGAGGCCCAAGTCTACCACTCGTCGTCCAAGCTCTTCAAATACACCGTCTTTGAGGACGACACGTGG GCCGCCTTTGACGACGCGACAACATGGGCGGCGAAAAAGGCGCTCATGCACAGCCTGGGCATGGGCGGCCTGGGG CTCTGGTGGCTCAACCACGACAACGGGCGCTTCGAGGCCATGAGCGAGCTGCTCGGCGACTTTTCCAGCCTGCAA CTCAAGGGCGGCAGCGCGACGCCACAGGAGCGCAAAAGCCTGGCGGAGCCAATGGCCGCCTTTACGGGCCAAGAC TGCTTCGCCACGGCGCAGTGTACAGACGGGTCGCTGGGGCAACGGGGCGCGGAGCAGACACATTTGCTGTCCTCG GAGCGCCATGCCCAAGAACTGTGA
Transcript	>OphauB2\|3490 ATGCAGCCCCATCATGCCGAAGACCACTTGAGCTTTCTGGATGAGCTACGGAATCGATTCGACACTCAAGATACT CGCTGGACGCTATCCGTTACCCTGACGGCTAGTAAAATCTGGCTGGACCAGTTTCCGCTCAAGGGCATGAAGCAC CACGTCAACTGGTTCAATCTTAAGACTGGTGACTCGGACGAGAGCAAAGACGGCCAACAGCCTCTCTTACGGGGC CACATGGACATGTCTGAAATCAAGCAGAGCATCCACCTCTTGCAAGACAATGACGTCGACTTGAACAATGTCGCC CTCGGGATGCTGCTCTACGGCCATGCCTTTATCCTCGACAACCACAGCTGCATCCACCCAGACGGCACGTGCAAG TACTCTGCGACGAGAAAGAGCTCCTGCTCCGCGCAACCGGGCATGCTAAGCTACGCGGAGCTCCTCTCGCGCAAC GAGAGCCAAGAGGCCCAAGTCTACCACTCGTCGTCCAAGCTCTTCAAATACACCGTCTTTGAGGACGACACGTGG GCCGCCTTTGACGACGCGACAACATGGGCGGCGAAAAAGGCGCTCATGCACAGCCTGGGCATGGGCGGCCTGGGG CTCTGGTGGCTCAACCACGACAACGGGCGCTTCGAGGCCATGAGCGAGCTGCTCGGCGACTTTTCCAGCCTGCAA CTCAAGGGCGGCAGCGCGACGCCACAGGAGCGCAAAAGCCTGGCGGAGCCAATGGCCGCCTTTACGGGCCAAGAC TGCTTCGCCACGGCGCAGTGTACAGACGGGTCGCTGGGGCAACGGGGCGCGGAGCAGACACATTTGCTGTCCTCG GAGCGCCATGCCCAAGAACTGTGA
Gene	>OphauB2\|3490 ATGCAGCCCCATCATGCCGAAGACCACTTGAGCTTTCTGGATGAGCTACGGAATCGATTCGACACTCAAGATACT CGCTGGACGCTATCCGTTACCCTGACGGCTAGTAAAATCTGGCTGGACCAGTTTCCGCTCAAGGGCATGAAGCAC CACGTCAACTGGTTCAATCTTAAGACTGGTGACTCGGTAAGCCCCTTGGCTCACCTCAAGACAAAATCAAGTGGA AAATTGACGGTGAGAGCAAAGGACGAGAGCAAAGACGGCCAACAGCCTCTCTTACGGGGCCACATGGACATGTCT GAAATCAAGCAGAGCATCCACCTCTTGCAAGACAATGACGTCGACTTGAACAATGTCGCCCTCGGGATGCTGCTC TACGGCCATGCCTTTATCCTCGACAACCACAGCTGCATCCACCCAGACGGCACGTGCAAGTACTCTGCGACGAGA AAGAGCTCCTGCTCCGCGCAACCGGGCATGCTAAGCTACGCGGAGCTCCTCTCGCGCAACGAGAGCCAAGAGGCC CAAGTCTACCACTCGTCGTCCAAGCTCTTCAAATACACCGTCTTTGAGGACGACACGTGGGCCGCCTTTGACGAC GCGACAACATGGGCGGCGAAAAAGGCGCTCATGCACAGCCTGGGCATGGGCGGCCTGGGGCTCTGGTGGCTCAAC CACGACAACGGGCGCTTCGAGGCCATGAGCGAGCTGCTCGGCGACTTTTCCAGCCTGCAACTCAAGGGCGGCAGC GCGACGCCACAGGAGCGCAAAAGCCTGGCGGAGCCAATGGCCGCCTTTACGGGCCAAGACTGCTTCGCCACGGCG CAGTGTACAGACGGGTCGCTGGGGCAACGGGGCGCGGAGCAGGTCTGTCCGAGCGGCTTCCTGTCCGTTGCCACG GCGCACATGCCGCTGCAGGCGCCGAGTCGCAAGCTGGCGGACAAGTGTGCGCAAAACTGGTACAGACACATTTGC TGTCCTCGGAGCGCCATGCCCAAGAACTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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