Protein ID | OphauB2|3449 |
Gene name | |
Location | Contig_22:83936..85852 |
Strand | + |
Gene length (bp) | 1916 |
Transcript length (bp) | 1392 |
Coding sequence length (bp) | 1392 |
Protein length (aa) | 464 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05730 | CFEM | CFEM domain | 1.5E-07 | 32 | 91 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 5 | 24 | 19 |
2 | 101 | 123 | 22 |
3 | 138 | 157 | 19 |
4 | 178 | 200 | 22 |
5 | 215 | 237 | 22 |
6 | 299 | 321 | 22 |
7 | 336 | 358 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 253 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|3449 MALAAGFGGIPLAAPVLAPIVSTVQMRSAIDLENLPSCAVECIQSRCSSMTDMDCVCVGKYKETEHRARCMIRAC GFQESLVARNITATACDRPVRNREPNILAMSITLLLITAFVIFVRLVFKQFFSHARRLSNDDWLIVAAGAVGLPC IFVLLFGLRPNGLGRDVWTQEPNTVLEFAKYFYVMEILYITVIMFVRISLSVFYLDIFPGKMIRRLLIGTIVYHA LCGFTFVIKVIFQCTPISYNWTRYSDAGPDHGRCISLNASSWANAALGVAADLWLLAIPLSQLSKLQLHWKKKIG AGLMFVTGAFGTLVSILRLHSIKHFANSTNPTWEQYGIVFWSAIEVMVGMICTSLPALRLILVRIWPRAFGSSAS QSRSKSSGLHAISDRRTPGNSHLDTDANDSVASSSTKVFKGHDERALTREKGFEQYQGASWGGEVMVQRQVDIEL ADKDDYPESKGSL* |
Coding | >OphauB2|3449 ATGGCGCTGGCAGCGGGTTTTGGAGGGATTCCCCTCGCGGCACCCGTCTTGGCGCCCATTGTGTCGACGGTGCAA ATGCGAAGCGCCATCGATTTGGAAAACCTGCCGAGTTGCGCAGTTGAGTGTATCCAGTCGCGATGCTCTTCCATG ACGGACATGGACTGCGTTTGCGTCGGCAAGTACAAGGAAACAGAACACCGAGCCAGATGCATGATTCGCGCCTGC GGGTTCCAAGAATCTCTTGTCGCTCGCAACATTACAGCCACGGCATGCGACCGCCCCGTGCGCAACCGCGAGCCC AACATCCTCGCCATGAGCATCACCCTCCTCCTCATCACCGCCTTTGTCATCTTTGTCCGCCTCGTCTTCAAGCAA TTCTTCAGCCACGCCCGTCGCCTTAGCAACGACGACTGGCTCATTGTCGCCGCCGGCGCCGTCGGCCTGCCCTGC ATCTTTGTCCTCCTCTTTGGTCTTCGCCCCAACGGCCTCGGCCGCGACGTCTGGACGCAGGAGCCCAATACGGTG CTCGAGTTTGCAAAGTATTTCTACGTCATGGAGATTCTCTACATTACCGTCATCATGTTTGTGCGCATCTCGCTG TCCGTCTTTTACCTCGACATTTTCCCGGGCAAGATGATTCGCAGACTGCTCATTGGCACAATTGTCTACCATGCG CTTTGCGGCTTTACTTTTGTCATCAAGGTCATTTTTCAGTGTACGCCCATTTCGTATAACTGGACGCGCTATAGC GACGCGGGGCCCGACCATGGACGCTGCATTTCGCTCAATGCGTCGAGCTGGGCCAATGCGGCGCTGGGCGTGGCG GCGGATTTGTGGCTGCTGGCCATTCCGCTGAGCCAGCTGTCCAAACTGCAGCTGCACTGGAAAAAGAAGATTGGA GCGGGCCTCATGTTTGTCACGGGCGCCTTCGGCACCCTCGTCTCCATCCTCCGCCTCCACTCCATCAAACATTTC GCCAACTCCACCAACCCAACCTGGGAACAGTACGGCATCGTCTTCTGGTCCGCCATTGAAGTCATGGTCGGCATG ATTTGCACCAGCCTCCCTGCCCTCCGCCTCATCCTCGTCCGCATCTGGCCCCGTGCCTTTGGCTCCTCGGCCTCG CAGTCCCGCAGCAAGTCGTCTGGCCTGCACGCCATTTCCGACCGCCGCACGCCTGGAAACTCTCATCTCGATACT GACGCAAACGACAGCGTGGCAAGCAGCTCGACAAAGGTGTTTAAAGGCCATGACGAACGCGCCCTCACGCGCGAA AAGGGCTTTGAGCAGTATCAGGGTGCGTCGTGGGGTGGCGAGGTCATGGTTCAGCGCCAGGTGGATATCGAGCTT GCGGATAAGGACGACTATCCCGAATCCAAGGGCTCCCTATAA |
Transcript | >OphauB2|3449 ATGGCGCTGGCAGCGGGTTTTGGAGGGATTCCCCTCGCGGCACCCGTCTTGGCGCCCATTGTGTCGACGGTGCAA ATGCGAAGCGCCATCGATTTGGAAAACCTGCCGAGTTGCGCAGTTGAGTGTATCCAGTCGCGATGCTCTTCCATG ACGGACATGGACTGCGTTTGCGTCGGCAAGTACAAGGAAACAGAACACCGAGCCAGATGCATGATTCGCGCCTGC GGGTTCCAAGAATCTCTTGTCGCTCGCAACATTACAGCCACGGCATGCGACCGCCCCGTGCGCAACCGCGAGCCC AACATCCTCGCCATGAGCATCACCCTCCTCCTCATCACCGCCTTTGTCATCTTTGTCCGCCTCGTCTTCAAGCAA TTCTTCAGCCACGCCCGTCGCCTTAGCAACGACGACTGGCTCATTGTCGCCGCCGGCGCCGTCGGCCTGCCCTGC ATCTTTGTCCTCCTCTTTGGTCTTCGCCCCAACGGCCTCGGCCGCGACGTCTGGACGCAGGAGCCCAATACGGTG CTCGAGTTTGCAAAGTATTTCTACGTCATGGAGATTCTCTACATTACCGTCATCATGTTTGTGCGCATCTCGCTG TCCGTCTTTTACCTCGACATTTTCCCGGGCAAGATGATTCGCAGACTGCTCATTGGCACAATTGTCTACCATGCG CTTTGCGGCTTTACTTTTGTCATCAAGGTCATTTTTCAGTGTACGCCCATTTCGTATAACTGGACGCGCTATAGC GACGCGGGGCCCGACCATGGACGCTGCATTTCGCTCAATGCGTCGAGCTGGGCCAATGCGGCGCTGGGCGTGGCG GCGGATTTGTGGCTGCTGGCCATTCCGCTGAGCCAGCTGTCCAAACTGCAGCTGCACTGGAAAAAGAAGATTGGA GCGGGCCTCATGTTTGTCACGGGCGCCTTCGGCACCCTCGTCTCCATCCTCCGCCTCCACTCCATCAAACATTTC GCCAACTCCACCAACCCAACCTGGGAACAGTACGGCATCGTCTTCTGGTCCGCCATTGAAGTCATGGTCGGCATG ATTTGCACCAGCCTCCCTGCCCTCCGCCTCATCCTCGTCCGCATCTGGCCCCGTGCCTTTGGCTCCTCGGCCTCG CAGTCCCGCAGCAAGTCGTCTGGCCTGCACGCCATTTCCGACCGCCGCACGCCTGGAAACTCTCATCTCGATACT GACGCAAACGACAGCGTGGCAAGCAGCTCGACAAAGGTGTTTAAAGGCCATGACGAACGCGCCCTCACGCGCGAA AAGGGCTTTGAGCAGTATCAGGGTGCGTCGTGGGGTGGCGAGGTCATGGTTCAGCGCCAGGTGGATATCGAGCTT GCGGATAAGGACGACTATCCCGAATCCAAGGGCTCCCTATAA |
Gene | >OphauB2|3449 ATGGCGCTGGCAGCGGGTTTTGGAGGGATTCCCCTCGCGGCACCCGTCTTGGCGCCCATTGTGTCGACGGTGCAA ATGCGAAGCGCCATCGATTTGGAAAACCTGCCGAGTTGCGCAGTAAGTCTTTATTTGGCTTTTTTTTTTGGCGGA AACAAGGCGACTAATAGTGGTTTAGGTTGAGTGTATCCAGTCGCGATGCTCTTCCATGACGGACATGGACTGCGT TTGCGTCGGCAAGTACAAGGAAACAGAACACCGAGCCAGATGCATGATTCGCGCCTGCGGGTTCCAAGAATCTCT TGGTATGTTTTTCCTCTCTCTCTTCTTTTTCCTCCCTGTCTTCTTTTCCTCCCTCTTCTTTTCCTCTCTCTTCTT TTTCCTTCCTCTCTTCTTTTCCTCCCTCTCTTCTTTTTCCTCCCTCTCTCCTTTTCCTCCCTCTCAGTCTTCTTC AGCTTCACCAACACACTCTCTCTCTAGTCGCTCGCAACATTACAGCCACGGCATGCGACCGCCCCGTGCGCAACC GCGAGCCCAACATCCTCGCCATGAGCATCACCCTCCTCCTCATCACCGCCTTTGTCATCTTTGTCCGCCTCGTCT TCAAGCAATTCTTCAGCCACGCCCGTCGCCTTAGCAACGACGACTGGCTCATTGTCGCCGCCGGCGCCGTCGGCC TGCCCTGCATCTTTGTCCTCCTCTTTGGTCTTCGCCCCAACGGCCTCGGCCGCGACGTCTGGACGCAGGAGCCCA ATACGGTGCTCGAGTTTGCAAAGTATTTCTACGTCATGGAGATTCTCTACATTACCGTCATCATGTTTGTGCGCA TCTCGCTGTCCGTCTTTTACCTCGACATTTTCCCGGGCAAGATGATTCGCAGACTGCTCATTGGCACAATTGTCT ACCATGCGCTTTGCGGCTTTACTTTTGTCATCAAGGTCATTTTTCAGTGTACGCCCATTTCGTATAACTGGACGC GCTATAGCGACGCGGGGCCCGACCATGGACGCTGCATTTCGCTCAATGCGTCGAGCTGGGCCAATGCGGCGCTGG GCGTGGCGGCGGATTTGTGGCTGCTGGCCATTCCGCTGAGCCAGCTGTCCAAACTGCAGCTGCACTGGAAAAAGA AGATTGGAGCGGGCCTCATGTTTGTCACGGGCGCCTTGTAAGTCTCTACACACTCTCAGACTCTATATCCCCAAA GACTCTATATCCCCAAAGATTCTATCCCCCAAGACTCTATCCCCAAAGACTATCCTCAAGACTCTATCCCCAAAG ACTCTATTCCCAAAGACTCTATCCCCAAAGACTCTATTCCCAAAGACTCTATCCCCAAAGACTCTATCCCCCCCT GTCCACTCTACTTGACTCCACTCTATCCCTCTACTTTTCCTTCGCTCCAACTCACTCCCAACTCGATACTCTCCC TTCAAATAGCTAACCTTCTCCTCCTCAGCGGCACCCTCGTCTCCATCCTCCGCCTCCACTCCATCAAACATTTCG CCAACTCCACCAACCCAACCTGGGAACAGTACGGCATCGTCTTCTGGTCCGCCATTGAAGTCATGGTCGGCATGA TTTGCACCAGCCTCCCTGCCCTCCGCCTCATCCTCGTCCGCATCTGGCCCCGTGCCTTTGGCTCCTCGGCCTCGC AGTCCCGCAGCAAGTCGTCTGGCCTGCACGCCATTTCCGACCGCCGCACGCCTGGAAACTCTCATCTCGATACTG ACGCAAACGACAGCGTGGCAAGCAGCTCGACAAAGGTGTTTAAAGGCCATGACGAACGCGCCCTCACGCGCGAAA AGGGCTTTGAGCAGTATCAGGGTGCGTCGTGGGGTGGCGAGGTCATGGTTCAGCGCCAGGTGGATATCGAGCTTG CGGATAAGGACGACTATCCCGAATCCAAGGGCTCCCTATAA |