© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|3406 |
| Gene name | |
| Location | Contig_218:2643..4226 |
| Strand | - |
| Gene length (bp) | 1583 |
| Transcript length (bp) | 1386 |
| Coding sequence length (bp) | 1386 |
| Protein length (aa) | 462 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03345 | DDOST_48kD | Oligosaccharyltransferase 48 kDa subunit beta | 4.0E-146 | 28 | 452 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O59866|OSTB_SCHPO | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit wbp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=wbp1 PE=2 SV=2 | 4 | 456 | 1.0E-62 |
| sp|P33767|OSTB_YEAST | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=WBP1 PE=1 SV=1 | 4 | 445 | 2.0E-53 |
| sp|Q6NYS8|OST48_DANRE | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Danio rerio GN=ddost PE=2 SV=2 | 11 | 451 | 8.0E-53 |
| sp|P48440|OST48_CHICK | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Gallus gallus GN=DDOST PE=1 SV=1 | 26 | 451 | 4.0E-52 |
| sp|Q5R501|OST48_PONAB | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Pongo abelii GN=DDOST PE=2 SV=2 | 14 | 451 | 6.0E-52 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O59866|OSTB_SCHPO | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit wbp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=wbp1 PE=2 SV=2 | 4 | 456 | 1.0E-62 |
| sp|P33767|OSTB_YEAST | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=WBP1 PE=1 SV=1 | 4 | 445 | 2.0E-53 |
| sp|Q6NYS8|OST48_DANRE | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Danio rerio GN=ddost PE=2 SV=2 | 11 | 451 | 8.0E-53 |
| sp|P48440|OST48_CHICK | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Gallus gallus GN=DDOST PE=1 SV=1 | 26 | 451 | 4.0E-52 |
| sp|Q5R501|OST48_PONAB | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Pongo abelii GN=DDOST PE=2 SV=2 | 14 | 451 | 6.0E-52 |
| sp|B1H3C9|OST48_XENTR | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Xenopus tropicalis GN=ddost PE=2 SV=1 | 7 | 451 | 8.0E-52 |
| sp|Q6GNR9|OST48_XENLA | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Xenopus laevis GN=ddost PE=2 SV=1 | 26 | 451 | 1.0E-51 |
| sp|P45971|OST48_CAEEL | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Caenorhabditis elegans GN=ostb-1 PE=3 SV=1 | 27 | 459 | 2.0E-51 |
| sp|P39656|OST48_HUMAN | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Homo sapiens GN=DDOST PE=1 SV=4 | 20 | 451 | 1.0E-50 |
| sp|Q05052|OST48_CANLF | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Canis lupus familiaris GN=DDOST PE=1 SV=1 | 22 | 451 | 4.0E-50 |
| sp|Q29381|OST48_PIG | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Sus scrofa GN=DDOST PE=1 SV=2 | 22 | 451 | 2.0E-49 |
| sp|A6QPY0|OST48_BOVIN | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Bos taurus GN=DDOST PE=2 SV=2 | 25 | 451 | 4.0E-49 |
| sp|O54734|OST48_MOUSE | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Mus musculus GN=Ddost PE=1 SV=2 | 10 | 451 | 4.0E-49 |
| sp|Q641Y0|OST48_RAT | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus GN=Ddost PE=2 SV=1 | 22 | 451 | 2.0E-48 |
| sp|Q6ZLK0|OST48_ORYSJ | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Oryza sativa subsp. japonica GN=OST48 PE=2 SV=1 | 26 | 451 | 4.0E-47 |
| sp|Q24319|OST48_DROME | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Drosophila melanogaster GN=Ost48 PE=2 SV=2 | 10 | 451 | 5.0E-46 |
| sp|Q944K2|OST48_ARATH | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Arabidopsis thaliana GN=OST48 PE=2 SV=1 | 5 | 451 | 5.0E-42 |
| sp|Q54E62|OST48_DICDI | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Dictyostelium discoideum GN=ddost PE=3 SV=1 | 10 | 452 | 6.0E-38 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0018279 | protein N-linked glycosylation via asparagine | Yes |
| GO:0005789 | endoplasmic reticulum membrane | Yes |
| GO:0018196 | peptidyl-asparagine modification | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0005575 | cellular_component | No |
| GO:0008150 | biological_process | No |
| GO:0016020 | membrane | No |
| GO:0018193 | peptidyl-amino acid modification | No |
| GO:0006487 | protein N-linked glycosylation | No |
| GO:0036211 | protein modification process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0043412 | macromolecule modification | No |
| GO:0006486 | protein glycosylation | No |
| GO:0044238 | primary metabolic process | No |
| GO:0070085 | glycosylation | No |
| GO:0043413 | macromolecule glycosylation | No |
| GO:0031090 | organelle membrane | No |
| GO:0019538 | protein metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 22 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 26 | 19 |
| 2 | 429 | 451 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|3406 MTTMRSLVSLAVLLLSTLAAALSTTGNRLLVILDDVADSEAYSLYMGDLADRGFDISYETPRSEGLKLFDLGERK YDHILFLPTKVKGLGPNLTPNLLVDFVNARGNILVALTSSSAAPSSLVAFLAEVQISLPPERTSLVVDHFCYDAV SAADMHDVLVLPMPLRLRPDVKPLFEMDDAVIALPRTSGHVLGQSSLLTPIVRAPATAYCYNPKEQLSGVDPDDL FAAGKQLALVSGMQALNSARVAVLGSAEMLKNEWLADERLVHSIASTKEARPANREFAKRLSGWTFQEIGVLRVT AMEHRLLGSNETNPESYRVKNQVSFSISMSEHEWDHWVPYTPPSGDSVQLEFSMLSPFHRLDLAAQASSDGSMAV LGRNFTLPDQHGIFNFRVTYKRPLLTYIDEKQTVSVRHMAHDEWPRSWAISGAWPWLAGIWATVVGFVGFCAVWM YSAPPRGQKRA* |
| Coding | >OphauB2|3406 ATGACAACCATGCGGTCGCTTGTGAGCTTGGCAGTACTGCTGCTTTCGACATTGGCGGCGGCACTTAGCACTACG GGCAATCGATTGCTCGTCATTTTGGATGATGTGGCTGACAGCGAGGCGTACTCGCTCTACATGGGCGATTTGGCA GACCGCGGATTCGACATTTCGTACGAGACTCCCCGAAGCGAGGGGTTGAAACTTTTTGACTTGGGCGAGCGCAAA TATGACCACATCTTGTTTCTGCCGACAAAGGTCAAAGGCCTGGGCCCAAACCTCACCCCGAATCTCCTTGTAGAC TTTGTCAATGCTCGGGGCAATATCCTTGTTGCATTGACTTCTTCATCCGCCGCGCCATCTTCCCTCGTTGCCTTT CTCGCCGAAGTGCAAATATCGCTCCCGCCCGAGCGCACAAGCCTTGTTGTCGACCACTTTTGCTACGATGCCGTT TCTGCCGCCGACATGCACGACGTGCTCGTCCTACCCATGCCTTTGCGCCTACGCCCCGACGTCAAGCCCTTGTTT GAAATGGACGACGCAGTCATTGCGCTACCGCGTACCTCTGGCCATGTCTTGGGCCAAAGCTCGCTCCTCACGCCC ATTGTGCGTGCGCCGGCAACGGCGTATTGCTATAACCCAAAGGAGCAGCTGAGCGGAGTGGACCCAGACGACTTG TTTGCCGCGGGGAAGCAGCTGGCGCTCGTGTCGGGCATGCAGGCGCTCAATTCGGCGCGTGTGGCTGTCTTGGGA TCGGCAGAGATGCTCAAGAATGAGTGGCTTGCAGATGAGCGTCTTGTCCATAGTATTGCGTCGACAAAGGAGGCG CGGCCTGCGAACCGCGAGTTTGCCAAGAGGCTTTCTGGATGGACCTTTCAAGAGATTGGTGTTTTGCGCGTCACG GCCATGGAGCACCGACTGCTTGGATCAAACGAGACTAATCCAGAATCATATCGCGTCAAGAACCAAGTTTCGTTT TCCATTTCCATGTCGGAGCACGAATGGGACCACTGGGTTCCGTACACGCCGCCCAGCGGAGACAGCGTCCAGCTA GAGTTTTCCATGCTCTCCCCCTTTCACCGTCTCGACTTGGCTGCCCAAGCCAGCAGCGACGGGTCAATGGCCGTC TTGGGCCGCAACTTTACACTGCCCGACCAGCACGGCATTTTCAACTTTAGAGTCACGTACAAGAGGCCCTTGTTG ACGTATATTGATGAGAAGCAGACGGTTAGTGTGCGGCACATGGCGCATGACGAGTGGCCGCGCAGTTGGGCTATA TCTGGGGCGTGGCCGTGGCTGGCGGGCATTTGGGCCACAGTGGTGGGCTTTGTGGGCTTTTGTGCAGTGTGGATG TATAGTGCGCCGCCAAGGGGGCAGAAGCGGGCGTAA |
| Transcript | >OphauB2|3406 ATGACAACCATGCGGTCGCTTGTGAGCTTGGCAGTACTGCTGCTTTCGACATTGGCGGCGGCACTTAGCACTACG GGCAATCGATTGCTCGTCATTTTGGATGATGTGGCTGACAGCGAGGCGTACTCGCTCTACATGGGCGATTTGGCA GACCGCGGATTCGACATTTCGTACGAGACTCCCCGAAGCGAGGGGTTGAAACTTTTTGACTTGGGCGAGCGCAAA TATGACCACATCTTGTTTCTGCCGACAAAGGTCAAAGGCCTGGGCCCAAACCTCACCCCGAATCTCCTTGTAGAC TTTGTCAATGCTCGGGGCAATATCCTTGTTGCATTGACTTCTTCATCCGCCGCGCCATCTTCCCTCGTTGCCTTT CTCGCCGAAGTGCAAATATCGCTCCCGCCCGAGCGCACAAGCCTTGTTGTCGACCACTTTTGCTACGATGCCGTT TCTGCCGCCGACATGCACGACGTGCTCGTCCTACCCATGCCTTTGCGCCTACGCCCCGACGTCAAGCCCTTGTTT GAAATGGACGACGCAGTCATTGCGCTACCGCGTACCTCTGGCCATGTCTTGGGCCAAAGCTCGCTCCTCACGCCC ATTGTGCGTGCGCCGGCAACGGCGTATTGCTATAACCCAAAGGAGCAGCTGAGCGGAGTGGACCCAGACGACTTG TTTGCCGCGGGGAAGCAGCTGGCGCTCGTGTCGGGCATGCAGGCGCTCAATTCGGCGCGTGTGGCTGTCTTGGGA TCGGCAGAGATGCTCAAGAATGAGTGGCTTGCAGATGAGCGTCTTGTCCATAGTATTGCGTCGACAAAGGAGGCG CGGCCTGCGAACCGCGAGTTTGCCAAGAGGCTTTCTGGATGGACCTTTCAAGAGATTGGTGTTTTGCGCGTCACG GCCATGGAGCACCGACTGCTTGGATCAAACGAGACTAATCCAGAATCATATCGCGTCAAGAACCAAGTTTCGTTT TCCATTTCCATGTCGGAGCACGAATGGGACCACTGGGTTCCGTACACGCCGCCCAGCGGAGACAGCGTCCAGCTA GAGTTTTCCATGCTCTCCCCCTTTCACCGTCTCGACTTGGCTGCCCAAGCCAGCAGCGACGGGTCAATGGCCGTC TTGGGCCGCAACTTTACACTGCCCGACCAGCACGGCATTTTCAACTTTAGAGTCACGTACAAGAGGCCCTTGTTG ACGTATATTGATGAGAAGCAGACGGTTAGTGTGCGGCACATGGCGCATGACGAGTGGCCGCGCAGTTGGGCTATA TCTGGGGCGTGGCCGTGGCTGGCGGGCATTTGGGCCACAGTGGTGGGCTTTGTGGGCTTTTGTGCAGTGTGGATG TATAGTGCGCCGCCAAGGGGGCAGAAGCGGGCGTAA |
| Gene | >OphauB2|3406 ATGACAACCATGCGGTCGCTTGTGAGCTTGGCAGTACTGCTGCTTTCGACATTGGCGGCGGCACTTAGCACTACG GGCAATCGATTGCTCGTCATTTTGGATGATGTGGCTGACAGCGAGGCGTACTCGCTCTACATGGGCGATTTGGCA GGTGAGGCAAAAAGCCTTCAAGACTTGATGGCGCCAGAGGGGCTCATGACGTTTGTATACTAGACCGCGGATTCG ACATTTCGTACGAGACTCCCCGAAGCGAGGGGTTGAAACTTTTTGACTTGGGCGAGCGCAAATATGACCACATCT TGTTTCTGCCGACAAAGGTCAAAGGTAATGCTGCAATGACTTTTTTTTGTAAGACGCATCCCATCAAACATGGAG CTGACTCTACTCATCTCACAGGCCTGGGCCCAAACCTCACCCCGAATCTCCTTGTAGACTTTGTCAATGCTCGGG GCAATATCCTTGTTGCATTGACTTCTTCATCCGCCGCGCCATCTTCCCTCGTTGCCTTTCTCGCCGAAGTGCAAA TATCGCTCCCGCCCGAGCGCACAAGCCTTGTTGTCGACCACTTTTGCTACGATGCCGTTTCTGCCGCCGACATGC ACGACGTGCTCGTCCTACCCATGCCTTTGCGCCTACGCCCCGACGTCAAGCCCTTGTTTGAAATGGACGACGCAG TCATTGCGCTACCGCGTACCTCTGGCCATGTCTTGGGCCAAAGCTCGCTCCTCACGCCCATTGTGCGTGCGCCGG CAACGGCGTATTGCTATAACCCAAAGGAGCAGCTGAGCGGAGTGGACCCAGACGACTTGTTTGCCGCGGGGAAGC AGCTGGCGCTCGTGTCGGGCATGCAGGCGCTCAATTCGGCGCGTGTGGCTGTCTTGGGATCGGCAGAGATGCTCA AGAATGAGTGGCTTGCAGATGAGCGTCTTGTCCATAGTATTGCGTCGACAAAGGAGGCGCGGCCTGCGAACCGCG AGTTTGCCAAGAGGCTTTCTGGATGGACCTTTCAAGAGATTGGTGTTTTGCGCGTCACGGCCATGGAGCACCGAC TGCTTGGATCAAACGAGACTAATCCAGAATCATATCGCGTCAAGAACCAAGTTGTGAGCTTTTTTTTTTGGCCTT GTGCCTGCTTTGCATGCTGCACCATGACTAATGCCTGGCAGTCGTTTTCCATTTCCATGTCGGAGCACGAATGGG ACCACTGGGTTCCGTACACGCCGCCCAGCGGAGACAGCGTCCAGCTAGAGTTTTCCATGCTCTCCCCCTTTCACC GTCTCGACTTGGCTGCCCAAGCCAGCAGCGACGGGTCAATGGCCGTCTTGGGCCGCAACTTTACACTGCCCGACC AGCACGGCATTTTCAACTTTAGAGTCACGTACAAGAGGCCCTTGTTGACGTATATTGATGAGAAGCAGACGGTTA GTGTGCGGCACATGGCGCATGACGAGTGGCCGCGCAGTTGGGCTATATCTGGGGCGTGGCCGTGGCTGGCGGGCA TTTGGGCCACAGTGGTGGGCTTTGTGGGCTTTTGTGCAGTGTGGATGTATAGTGCGCCGCCAAGGGGGCAGAAGC GGGCGTAA |