© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|3402 |
| Gene name | |
| Location | Contig_217:17775..19539 |
| Strand | + |
| Gene length (bp) | 1764 |
| Transcript length (bp) | 1431 |
| Coding sequence length (bp) | 1431 |
| Protein length (aa) | 477 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01565 | FAD_binding_4 | FAD binding domain | 1.8E-20 | 47 | 181 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4B1P2|A2372_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 | 24 | 472 | 8.0E-36 |
| sp|D7UQ40|SOL5_ALTSO | Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 | 8 | 239 | 2.0E-18 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 44 | 248 | 3.0E-17 |
| sp|P43485|MCRA_STRLA | Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 | 23 | 279 | 1.0E-16 |
| sp|Q6Z955|CKX11_ORYSJ | Cytokinin dehydrogenase 11 OS=Oryza sativa subsp. japonica GN=CKX11 PE=2 SV=1 | 41 | 296 | 2.0E-13 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4B1P2|A2372_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 | 24 | 472 | 8.0E-36 |
| sp|D7UQ40|SOL5_ALTSO | Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 | 8 | 239 | 2.0E-18 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 44 | 248 | 3.0E-17 |
| sp|P43485|MCRA_STRLA | Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 | 23 | 279 | 1.0E-16 |
| sp|Q6Z955|CKX11_ORYSJ | Cytokinin dehydrogenase 11 OS=Oryza sativa subsp. japonica GN=CKX11 PE=2 SV=1 | 41 | 296 | 2.0E-13 |
| sp|Q54H55|Y8969_DICDI | FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 | 17 | 218 | 3.0E-11 |
| sp|O22213|CKX1_ARATH | Cytokinin dehydrogenase 1 OS=Arabidopsis thaliana GN=CKX1 PE=1 SV=1 | 6 | 214 | 4.0E-10 |
| sp|Q9FUJ3|CKX2_ARATH | Cytokinin dehydrogenase 2 OS=Arabidopsis thaliana GN=CKX2 PE=1 SV=2 | 45 | 214 | 4.0E-09 |
| sp|P58710|GGLO_MOUSE | L-gulonolactone oxidase OS=Mus musculus GN=Gulo PE=1 SV=3 | 29 | 203 | 5.0E-09 |
| sp|Q9LY71|CKX6_ARATH | Cytokinin dehydrogenase 6 OS=Arabidopsis thaliana GN=CKX6 PE=2 SV=2 | 7 | 248 | 2.0E-08 |
| sp|Q796Y5|YGAK_BACSU | Uncharacterized FAD-linked oxidoreductase YgaK OS=Bacillus subtilis (strain 168) GN=ygaK PE=3 SV=4 | 24 | 251 | 5.0E-08 |
| sp|Q3ZC33|GGLO_BOVIN | L-gulonolactone oxidase OS=Bos taurus GN=GULO PE=2 SV=3 | 29 | 224 | 7.0E-08 |
| sp|A3AVP1|CKX8_ORYSJ | Cytokinin dehydrogenase 8 OS=Oryza sativa subsp. japonica GN=CKX8 PE=3 SV=1 | 45 | 215 | 2.0E-07 |
| sp|A2XVN3|CKX8_ORYSI | Cytokinin dehydrogenase 8 OS=Oryza sativa subsp. indica GN=CKX8 PE=3 SV=1 | 45 | 215 | 2.0E-07 |
| sp|Q75K78|CKX9_ORYSJ | Cytokinin dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CKX9 PE=2 SV=1 | 45 | 214 | 1.0E-06 |
| sp|Q9FUJ1|CKX7_ARATH | Cytokinin dehydrogenase 7 OS=Arabidopsis thaliana GN=CKX7 PE=1 SV=1 | 44 | 205 | 2.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0043168 | anion binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0000166 | nucleotide binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|3402 MSLAAEAAIASLEAAGLASITLKPGHDDYETRANSSWSRTVRCRPWAIVQPRSTNDVCAAVKAIVATPNCNFAIR SGGHSPWPGAASINQGILIDLGQMVGTTYHAHTQIASILPGGTWTQVYTELEKHGRLVAGGREGHIGVGGLVLGG GLGFQTCRVGFTCDQVVNFVLVDSTGTALDVNASSHPDLFRALKGGGNNFGIVTRFDMATFAAPPAFLHGSVTFA LHAAPHLAKAYVNYVSCLNHRPDSHVLVAWETRPNQDCLIRLMVFGLDGIKDHPDLLPLINCPGAHTDLQLSTVA TNVGQFLMPSDKENIWFSATFRANPQVILHAARIYPPLLALIKSHVPSGDFFSLLTFQPLPASFAQRSHQNVIGI DAADGDCILLALVLQVASPSLCNDIVIPAAKALVANLEDFARSLDAFVPWRYANYCSPHQDPAASFGARNLSFVR HVAARYDPQAIFQNRVPGGFKIPPPQ* |
| Coding | >OphauB2|3402 ATGTCATTGGCTGCAGAAGCCGCCATTGCCAGCCTCGAGGCGGCCGGCCTGGCTTCCATAACCCTCAAGCCCGGC CACGACGACTACGAGACGCGAGCCAACTCGTCGTGGTCTCGTACCGTGCGCTGTCGCCCCTGGGCCATTGTCCAA CCTCGCAGCACCAATGACGTCTGTGCTGCTGTCAAGGCCATTGTCGCTACCCCCAATTGTAACTTTGCTATACGC AGTGGCGGCCATAGCCCCTGGCCCGGCGCCGCCAGTATCAACCAGGGCATCCTCATCGACCTTGGCCAAATGGTG GGCACCACTTACCATGCCCACACTCAGATTGCCTCGATTCTTCCTGGAGGCACCTGGACCCAAGTCTATACAGAA CTCGAGAAGCATGGACGCCTGGTAGCTGGAGGCCGCGAGGGCCATATTGGCGTCGGCGGCCTCGTGCTCGGCGGC GGCCTGGGCTTCCAGACTTGCCGCGTCGGTTTCACATGCGACCAAGTCGTCAACTTTGTCCTCGTCGACAGTACT GGCACTGCCCTTGATGTCAACGCTTCCTCGCACCCTGACCTCTTCCGCGCTCTCAAGGGCGGCGGCAACAACTTT GGCATCGTCACCCGCTTCGACATGGCCACCTTTGCTGCCCCTCCTGCCTTTTTGCATGGCTCCGTCACTTTTGCT CTCCATGCCGCTCCACACCTCGCCAAAGCCTATGTGAATTATGTCTCTTGCCTCAACCACCGGCCCGACAGCCAC GTCCTTGTCGCCTGGGAAACCCGCCCCAACCAAGACTGCCTCATTCGTCTCATGGTCTTTGGCCTCGACGGTATT AAAGACCATCCTGACCTGCTGCCCCTCATCAACTGCCCCGGCGCTCATACCGACCTGCAACTCTCCACTGTTGCC ACCAACGTTGGCCAGTTTCTCATGCCCTCTGACAAAGAAAACATTTGGTTCTCCGCCACCTTTAGGGCAAACCCC CAAGTCATCCTCCACGCTGCCAGGATTTACCCTCCTCTGCTCGCTCTCATCAAATCCCACGTTCCCTCGGGTGAC TTCTTTTCTCTCTTGACCTTTCAGCCTCTGCCAGCCTCGTTTGCTCAACGCTCCCATCAAAATGTCATTGGCATC GATGCCGCCGACGGAGACTGCATCCTTTTGGCCCTGGTACTCCAAGTCGCGTCGCCGTCACTCTGTAATGACATT GTTATCCCCGCTGCCAAGGCCCTCGTTGCCAACTTGGAAGACTTTGCTCGCTCTCTAGATGCCTTTGTTCCTTGG CGCTATGCCAACTACTGCTCGCCCCATCAGGACCCAGCCGCTTCCTTTGGCGCTCGCAATCTTTCCTTTGTCCGC CATGTCGCTGCTCGCTACGATCCTCAGGCAATCTTCCAAAACAGAGTCCCAGGTGGCTTCAAAATTCCTCCACCC CAATAA |
| Transcript | >OphauB2|3402 ATGTCATTGGCTGCAGAAGCCGCCATTGCCAGCCTCGAGGCGGCCGGCCTGGCTTCCATAACCCTCAAGCCCGGC CACGACGACTACGAGACGCGAGCCAACTCGTCGTGGTCTCGTACCGTGCGCTGTCGCCCCTGGGCCATTGTCCAA CCTCGCAGCACCAATGACGTCTGTGCTGCTGTCAAGGCCATTGTCGCTACCCCCAATTGTAACTTTGCTATACGC AGTGGCGGCCATAGCCCCTGGCCCGGCGCCGCCAGTATCAACCAGGGCATCCTCATCGACCTTGGCCAAATGGTG GGCACCACTTACCATGCCCACACTCAGATTGCCTCGATTCTTCCTGGAGGCACCTGGACCCAAGTCTATACAGAA CTCGAGAAGCATGGACGCCTGGTAGCTGGAGGCCGCGAGGGCCATATTGGCGTCGGCGGCCTCGTGCTCGGCGGC GGCCTGGGCTTCCAGACTTGCCGCGTCGGTTTCACATGCGACCAAGTCGTCAACTTTGTCCTCGTCGACAGTACT GGCACTGCCCTTGATGTCAACGCTTCCTCGCACCCTGACCTCTTCCGCGCTCTCAAGGGCGGCGGCAACAACTTT GGCATCGTCACCCGCTTCGACATGGCCACCTTTGCTGCCCCTCCTGCCTTTTTGCATGGCTCCGTCACTTTTGCT CTCCATGCCGCTCCACACCTCGCCAAAGCCTATGTGAATTATGTCTCTTGCCTCAACCACCGGCCCGACAGCCAC GTCCTTGTCGCCTGGGAAACCCGCCCCAACCAAGACTGCCTCATTCGTCTCATGGTCTTTGGCCTCGACGGTATT AAAGACCATCCTGACCTGCTGCCCCTCATCAACTGCCCCGGCGCTCATACCGACCTGCAACTCTCCACTGTTGCC ACCAACGTTGGCCAGTTTCTCATGCCCTCTGACAAAGAAAACATTTGGTTCTCCGCCACCTTTAGGGCAAACCCC CAAGTCATCCTCCACGCTGCCAGGATTTACCCTCCTCTGCTCGCTCTCATCAAATCCCACGTTCCCTCGGGTGAC TTCTTTTCTCTCTTGACCTTTCAGCCTCTGCCAGCCTCGTTTGCTCAACGCTCCCATCAAAATGTCATTGGCATC GATGCCGCCGACGGAGACTGCATCCTTTTGGCCCTGGTACTCCAAGTCGCGTCGCCGTCACTCTGTAATGACATT GTTATCCCCGCTGCCAAGGCCCTCGTTGCCAACTTGGAAGACTTTGCTCGCTCTCTAGATGCCTTTGTTCCTTGG CGCTATGCCAACTACTGCTCGCCCCATCAGGACCCAGCCGCTTCCTTTGGCGCTCGCAATCTTTCCTTTGTCCGC CATGTCGCTGCTCGCTACGATCCTCAGGCAATCTTCCAAAACAGAGTCCCAGGTGGCTTCAAAATTCCTCCACCC CAATAA |
| Gene | >OphauB2|3402 ATGTCATTGGCTGCAGAAGCCGCCATTGCCAGCCTCGAGGCGGCCGGCCTGGCTTCCATAACCCTCAAGCCCGGC CACGACGACTACGAGACGCGAGCCAACTCGTCGTGGTCTCGTACCGTGCGCTGTCGCCCCTGGGCCATTGTCCAA CCTCGCAGCACCAATGACGTCTGTGCTGCTGTCAAGGCCATTGTCGCTACCCCCAATTGTAACTTTGCTATACGC AGGTAAAGCCGCCCTCTTTGATTCTTGTTGGTCTCACCTACCACTCATGCCAGTCTAGTGGCGGCCATAGCCCCT GGCCCGGCGCCGCCAGTATCAACCAGGGCATCCTCATCGACCTTGGCCAAATGGTGGGCACCACTTACCATGCCC ACACTCAGATTGCCTCGATTCTTCCTGGAGGCACCTGGACCCAAGTCTATACAGAACTCGAGAAGCGTACCTCTT CCTCTTGACTCCCTCTTGACTCCCCCTTGACTCCCCCTTGACTCCCTCGACTCCACTTGCCGCTGACAGAAACAA CCCAGATGGACGCCTGGTAGCTGGAGGCCGCGAGGGCCATATTGGCGTCGGCGGCCTCGTGCTCGGCGGCGGCCT GGGCTTCCAGACTTGCCGCGTCGGTTTCACATGCGGTGCGTCCACTCTTTGTGTCTCTCGTCCTGTCTCGCGCCA TGCGCTAAACCTCCAAGCTAGACCAAGTCGTCAACTTTGTCCTCGTCGACAGTACTGGCACTGCCCTTGATGTCA ACGCTTCCTCGCACCCTGACCTCTTCCGCGCTCTCAAGGGCGGCGGCAACAACTTTGGCATCGTCACCCGCTTCG ACATGGCCACCTTTGCTGCCCCTCCTGCCTTTTTGCATGGCTCCGTCACTTTTGCTCTCCATGCCGCTCCACACC TCGCCAAAGCCTATGTGAATTATGTCTCTTGCCTCAACCACCGGCCCGACAGCCACGTCCTTGTCGCCTGGGAAA CCCGCCCCAACCAAGACTGCCTCATTCGTCTCATGGTCTTTGGCCTCGACGGTATTAAAGACCATCCTGACCTGC TGCCCCTCATCAACTGCCCCGGCGCTCATACCGACCTGCAACTCTCCACTGTTGCCACCAACGTTGGCCAGTTTC TCATGCCCTCTGACAAAGAGTAAGCAGTCTGCTCACCGTCGTCTCCCTATGCCTCTTGCTTTCCCTCTTCCTCTC CTTGTCCCTCTCCTTGTCCCTCTCCTTGGCCACTTGTTCCCAGGCTGATATTGGCTGCGCCTTTGAAAAAGAAAC ATTTGGTTCTCCGCCACCTTTAGGGCAAACCCCCAAGTCATCCTCCACGCTGCCAGGATTTACCCTCCTCTGCTC GCTCTCATCAAATCCCACGTTCCCTCGGGTGACTTCTTTTCTCTCTTGACCTTTCAGCCTCTGCCAGCCTCGTTT GCTCAACGCTCCCATCAAAATGTCATTGGCATCGATGCCGCCGACGGAGACTGCATCCTTTTGGCCCTGGTACTC CAAGTCGCGTCGCCGTCACTCTGTAATGACATTGTTATCCCCGCTGCCAAGGCCCTCGTTGCCAACTTGGAAGAC TTTGCTCGCTCTCTAGATGCCTTTGTTCCTTGGCGCTATGCCAACTACTGCTCGCCCCATCAGGACCCAGCCGCT TCCTTTGGCGCTCGCAATCTTTCCTTTGTCCGCCATGTCGCTGCTCGCTACGATCCTCAGGCAATCTTCCAAAAC AGAGTCCCAGGTGGCTTCAAAATTCCTCCACCCCAATAA |