Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|338
Gene name
LocationContig_102:45217..47506
Strand+
Gene length (bp)2289
Transcript length (bp)2289
Coding sequence length (bp)2289
Protein length (aa) 763

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07522 DRMBL DNA repair metallo-beta-lactamase 2.0E-37 578 711
PF12706 Lactamase_B_2 Beta-lactamase superfamily domain 4.0E-07 323 441

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q10264|PSO2_SCHPO DNA cross-link repair protein pso2/snm1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pso2 PE=3 SV=3 173 738 5.0E-116
sp|Q38961|SNM1_ARATH DNA cross-link repair protein SNM1 OS=Arabidopsis thaliana GN=SNM1 PE=2 SV=1 297 727 5.0E-73
sp|Q9JIC3|DCR1A_MOUSE DNA cross-link repair 1A protein OS=Mus musculus GN=Dclre1a PE=1 SV=2 289 729 6.0E-73
sp|Q5QJC4|DCR1A_CHICK DNA cross-link repair 1A protein OS=Gallus gallus GN=DCLRE1A PE=1 SV=1 286 729 2.0E-72
sp|Q6PJP8|DCR1A_HUMAN DNA cross-link repair 1A protein OS=Homo sapiens GN=DCLRE1A PE=1 SV=3 296 729 4.0E-71
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Swissprot ID Swissprot Description Start End E-value
sp|Q10264|PSO2_SCHPO DNA cross-link repair protein pso2/snm1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pso2 PE=3 SV=3 173 738 5.0E-116
sp|Q38961|SNM1_ARATH DNA cross-link repair protein SNM1 OS=Arabidopsis thaliana GN=SNM1 PE=2 SV=1 297 727 5.0E-73
sp|Q9JIC3|DCR1A_MOUSE DNA cross-link repair 1A protein OS=Mus musculus GN=Dclre1a PE=1 SV=2 289 729 6.0E-73
sp|Q5QJC4|DCR1A_CHICK DNA cross-link repair 1A protein OS=Gallus gallus GN=DCLRE1A PE=1 SV=1 286 729 2.0E-72
sp|Q6PJP8|DCR1A_HUMAN DNA cross-link repair 1A protein OS=Homo sapiens GN=DCLRE1A PE=1 SV=3 296 729 4.0E-71
sp|P30620|PSO2_YEAST DNA cross-link repair protein PSO2/SNM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PSO2 PE=1 SV=1 300 731 5.0E-56
sp|Q86KS1|DCR1_DICDI DNA cross-link repair 1 protein OS=Dictyostelium discoideum GN=dclre1 PE=3 SV=1 300 712 8.0E-47
sp|Q5QJC3|DCR1B_CHICK 5' exonuclease Apollo OS=Gallus gallus GN=DCLRE1B PE=2 SV=1 304 709 7.0E-31
sp|B0V2S2|DCR1B_DANRE 5' exonuclease Apollo OS=Danio rerio GN=dclre1b PE=2 SV=1 303 605 4.0E-27
sp|D2H8V8|DCR1B_AILME 5' exonuclease Apollo OS=Ailuropoda melanoleuca GN=DCLRE1B PE=3 SV=1 304 512 2.0E-24
sp|Q9H816|DCR1B_HUMAN 5' exonuclease Apollo OS=Homo sapiens GN=DCLRE1B PE=1 SV=1 304 512 6.0E-23
sp|Q4KLY6|DCR1B_RAT 5' exonuclease Apollo OS=Rattus norvegicus GN=Dclre1b PE=1 SV=2 304 512 2.0E-22
sp|Q8C7W7|DCR1B_MOUSE 5' exonuclease Apollo OS=Mus musculus GN=Dclre1b PE=1 SV=2 304 512 2.0E-22
sp|Q5QJC2|DCR1C_CHICK Protein artemis OS=Gallus gallus GN=DCLRE1C PE=2 SV=1 310 485 3.0E-13
sp|Q96SD1|DCR1C_HUMAN Protein artemis OS=Homo sapiens GN=DCLRE1C PE=1 SV=2 309 485 1.0E-11
sp|Q5R6Z9|DCR1C_PONAB Protein artemis OS=Pongo abelii GN=DCLRE1C PE=2 SV=1 309 485 1.0E-11
sp|Q5XIX3|DCR1C_RAT Protein artemis OS=Rattus norvegicus GN=Dclre1c PE=1 SV=1 309 485 2.0E-11
sp|Q8K4J0|DCR1C_MOUSE Protein artemis OS=Mus musculus GN=Dclre1c PE=1 SV=2 309 485 5.0E-11
sp|Q5RGE5|DCR1C_DANRE Protein artemis OS=Danio rerio GN=dclre1c PE=2 SV=1 325 467 1.0E-10
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|338
MLFMVATLKQVRRRPAAGIKPNTSILSFFRPAEKQEESLFVGSRPVPLCLDGGENRFNESNAPSKKQRLSVLSEA
GLTVAPTDSGQDETSNRNSDDDKNNPASSRPTGLPFVFDSDSDDEPDESSDSKRLRIDAIDNAVPDDSRASLDEI
YEAEQDDQGEETRLMRLFAAEEGDASLLDDGQETMIDTCPICDYSLSGCSSDDATRHVNMCLDSNGGESVPSPPP
QVHHVDSSLLSKRFARAAIPKPAQANPLPIDDCNPDAKTAFSTLMSGNAEDSAWATAAAAEHASHGRPAYQRTCP
FYKIIPGFNICVDAFRYGAVQGCEAYFLSHFHSDHYMGLTANWTHGPIYCSGVTGRLVKQQLRTAAKWVVELEFD
KSYDIPGTDASVTMIAANHCPGSSLFLFQKFVKTAASQRVQRILHCGDFRACPAHIAHPLLKPDIVEAVTGKMNR
QSINVCYLDTTYLNPRYSFPPQEHVIKACADLCASMSPDPDCKDDVWDRSSRAAGDQAVSKFFHETKTERLDGSE
KKPARSRQRLLVVCGTYSIGKERICVAIAKALGSKIFVTSAKAKIFRQLQDAELTSLLTSDPLEAQVHMQSLMEI
RAETLQDYLSSYKPHFSRIVGFRPSGWTFRPSNGKTVGANTPPGTVATQEILHGKGWRTSFGYKDLMHQRGSTKE
AMCFGVPYSEHSSFRELAMFIMALRIEKVIPTVNVGSEQSRKRMKGWIDRWMAERRRGGLIKVLVEGSDEDEELW
QGDPARGRGVWW*
Coding >OphauB2|338
ATGTTATTCATGGTTGCAACACTCAAACAAGTCAGACGCCGCCCTGCTGCGGGCATCAAACCTAACACTAGCATT
CTCAGCTTCTTTCGCCCTGCCGAAAAACAAGAAGAATCTCTCTTTGTTGGCTCAAGGCCCGTGCCCCTTTGCCTC
GACGGTGGCGAAAACCGCTTCAATGAGTCGAATGCGCCCTCGAAGAAACAACGGCTCAGTGTCCTCAGTGAAGCG
GGCCTGACCGTCGCTCCTACAGACTCTGGTCAAGATGAGACTTCCAACAGAAACTCGGACGACGACAAGAATAAT
CCTGCTTCATCACGGCCGACTGGCCTCCCTTTTGTCTTTGACTCGGATTCGGACGATGAGCCAGACGAGTCTAGC
GACAGTAAACGTCTCAGAATAGATGCCATCGATAATGCTGTACCGGACGATTCACGCGCGTCGCTTGACGAGATT
TATGAGGCGGAACAAGATGACCAAGGCGAGGAAACACGCCTCATGCGACTCTTTGCAGCCGAAGAGGGAGACGCG
TCCTTGCTTGATGATGGCCAAGAGACGATGATCGATACATGTCCCATTTGTGATTATAGTTTGTCAGGATGTTCG
TCTGACGATGCAACTCGCCATGTCAACATGTGTCTGGATAGCAATGGAGGAGAATCTGTGCCCAGTCCACCACCT
CAAGTCCACCATGTGGATTCCAGTCTTTTGAGCAAGAGATTTGCCCGAGCCGCCATCCCGAAGCCCGCCCAGGCC
AATCCTTTGCCAATCGACGACTGCAACCCAGATGCCAAAACTGCCTTTTCCACCCTCATGTCTGGCAATGCCGAG
GACTCGGCCTGGGCCACGGCAGCCGCGGCAGAGCATGCATCTCACGGCCGGCCCGCGTACCAAAGGACTTGTCCA
TTCTACAAGATTATACCTGGCTTCAACATATGCGTCGATGCCTTTCGCTATGGCGCCGTGCAAGGCTGTGAAGCC
TACTTTCTGAGCCACTTTCACAGCGACCACTACATGGGCCTCACTGCCAACTGGACCCATGGACCAATATATTGC
AGCGGAGTCACAGGTCGTCTTGTCAAGCAGCAGCTCAGGACTGCTGCTAAATGGGTCGTTGAACTCGAGTTCGAC
AAGTCCTATGACATTCCAGGAACCGACGCCTCTGTCACCATGATTGCGGCAAATCACTGTCCTGGAAGTAGCCTC
TTTCTCTTTCAAAAATTTGTCAAAACAGCCGCCAGCCAGCGAGTGCAGCGCATTCTGCACTGCGGTGATTTCCGC
GCCTGTCCAGCCCACATTGCTCACCCCTTGCTCAAGCCAGATATTGTCGAAGCTGTGACTGGAAAGATGAATAGG
CAAAGCATCAATGTGTGCTACCTTGACACGACATATCTCAATCCACGCTATTCTTTTCCTCCACAGGAGCACGTC
ATCAAAGCTTGCGCCGACTTGTGCGCCTCCATGTCTCCAGACCCTGACTGCAAAGACGATGTTTGGGACCGCTCT
TCCAGAGCTGCCGGCGACCAAGCAGTGAGCAAATTTTTTCACGAGACCAAGACAGAGCGTCTAGACGGGTCTGAG
AAGAAGCCAGCTAGGTCTCGACAACGCTTGCTCGTTGTTTGCGGTACCTACTCCATTGGGAAAGAGCGCATATGC
GTAGCCATTGCCAAGGCTCTGGGATCAAAGATATTCGTCACCTCGGCCAAGGCCAAGATATTCCGACAGCTTCAA
GATGCCGAGCTTACATCATTGCTCACGTCGGATCCCCTCGAGGCCCAGGTGCACATGCAATCCCTCATGGAGATT
CGCGCAGAGACGCTTCAGGATTATCTGAGCAGCTATAAGCCTCATTTCAGCCGCATAGTTGGCTTTCGTCCCAGC
GGCTGGACCTTTCGCCCTAGCAACGGCAAGACTGTCGGCGCCAACACACCGCCCGGCACCGTCGCTACCCAGGAA
ATCTTGCACGGCAAGGGCTGGAGGACGAGCTTTGGCTACAAGGACTTGATGCACCAAAGAGGCAGCACCAAGGAA
GCCATGTGTTTTGGAGTGCCCTATTCGGAGCACAGCAGTTTTCGAGAATTAGCAATGTTTATAATGGCGCTGCGC
ATCGAAAAGGTGATTCCCACGGTAAATGTGGGCAGCGAGCAGTCGAGGAAGAGAATGAAGGGCTGGATTGACCGC
TGGATGGCGGAACGGCGGCGCGGCGGGCTCATCAAGGTGTTGGTGGAGGGGAGTGATGAAGATGAAGAGCTGTGG
CAAGGGGATCCAGCACGAGGGCGAGGTGTCTGGTGGTGA
Transcript >OphauB2|338
ATGTTATTCATGGTTGCAACACTCAAACAAGTCAGACGCCGCCCTGCTGCGGGCATCAAACCTAACACTAGCATT
CTCAGCTTCTTTCGCCCTGCCGAAAAACAAGAAGAATCTCTCTTTGTTGGCTCAAGGCCCGTGCCCCTTTGCCTC
GACGGTGGCGAAAACCGCTTCAATGAGTCGAATGCGCCCTCGAAGAAACAACGGCTCAGTGTCCTCAGTGAAGCG
GGCCTGACCGTCGCTCCTACAGACTCTGGTCAAGATGAGACTTCCAACAGAAACTCGGACGACGACAAGAATAAT
CCTGCTTCATCACGGCCGACTGGCCTCCCTTTTGTCTTTGACTCGGATTCGGACGATGAGCCAGACGAGTCTAGC
GACAGTAAACGTCTCAGAATAGATGCCATCGATAATGCTGTACCGGACGATTCACGCGCGTCGCTTGACGAGATT
TATGAGGCGGAACAAGATGACCAAGGCGAGGAAACACGCCTCATGCGACTCTTTGCAGCCGAAGAGGGAGACGCG
TCCTTGCTTGATGATGGCCAAGAGACGATGATCGATACATGTCCCATTTGTGATTATAGTTTGTCAGGATGTTCG
TCTGACGATGCAACTCGCCATGTCAACATGTGTCTGGATAGCAATGGAGGAGAATCTGTGCCCAGTCCACCACCT
CAAGTCCACCATGTGGATTCCAGTCTTTTGAGCAAGAGATTTGCCCGAGCCGCCATCCCGAAGCCCGCCCAGGCC
AATCCTTTGCCAATCGACGACTGCAACCCAGATGCCAAAACTGCCTTTTCCACCCTCATGTCTGGCAATGCCGAG
GACTCGGCCTGGGCCACGGCAGCCGCGGCAGAGCATGCATCTCACGGCCGGCCCGCGTACCAAAGGACTTGTCCA
TTCTACAAGATTATACCTGGCTTCAACATATGCGTCGATGCCTTTCGCTATGGCGCCGTGCAAGGCTGTGAAGCC
TACTTTCTGAGCCACTTTCACAGCGACCACTACATGGGCCTCACTGCCAACTGGACCCATGGACCAATATATTGC
AGCGGAGTCACAGGTCGTCTTGTCAAGCAGCAGCTCAGGACTGCTGCTAAATGGGTCGTTGAACTCGAGTTCGAC
AAGTCCTATGACATTCCAGGAACCGACGCCTCTGTCACCATGATTGCGGCAAATCACTGTCCTGGAAGTAGCCTC
TTTCTCTTTCAAAAATTTGTCAAAACAGCCGCCAGCCAGCGAGTGCAGCGCATTCTGCACTGCGGTGATTTCCGC
GCCTGTCCAGCCCACATTGCTCACCCCTTGCTCAAGCCAGATATTGTCGAAGCTGTGACTGGAAAGATGAATAGG
CAAAGCATCAATGTGTGCTACCTTGACACGACATATCTCAATCCACGCTATTCTTTTCCTCCACAGGAGCACGTC
ATCAAAGCTTGCGCCGACTTGTGCGCCTCCATGTCTCCAGACCCTGACTGCAAAGACGATGTTTGGGACCGCTCT
TCCAGAGCTGCCGGCGACCAAGCAGTGAGCAAATTTTTTCACGAGACCAAGACAGAGCGTCTAGACGGGTCTGAG
AAGAAGCCAGCTAGGTCTCGACAACGCTTGCTCGTTGTTTGCGGTACCTACTCCATTGGGAAAGAGCGCATATGC
GTAGCCATTGCCAAGGCTCTGGGATCAAAGATATTCGTCACCTCGGCCAAGGCCAAGATATTCCGACAGCTTCAA
GATGCCGAGCTTACATCATTGCTCACGTCGGATCCCCTCGAGGCCCAGGTGCACATGCAATCCCTCATGGAGATT
CGCGCAGAGACGCTTCAGGATTATCTGAGCAGCTATAAGCCTCATTTCAGCCGCATAGTTGGCTTTCGTCCCAGC
GGCTGGACCTTTCGCCCTAGCAACGGCAAGACTGTCGGCGCCAACACACCGCCCGGCACCGTCGCTACCCAGGAA
ATCTTGCACGGCAAGGGCTGGAGGACGAGCTTTGGCTACAAGGACTTGATGCACCAAAGAGGCAGCACCAAGGAA
GCCATGTGTTTTGGAGTGCCCTATTCGGAGCACAGCAGTTTTCGAGAATTAGCAATGTTTATAATGGCGCTGCGC
ATCGAAAAGGTGATTCCCACGGTAAATGTGGGCAGCGAGCAGTCGAGGAAGAGAATGAAGGGCTGGATTGACCGC
TGGATGGCGGAACGGCGGCGCGGCGGGCTCATCAAGGTGTTGGTGGAGGGGAGTGATGAAGATGAAGAGCTGTGG
CAAGGGGATCCAGCACGAGGGCGAGGTGTCTGGTGGTGA
Gene >OphauB2|338
ATGTTATTCATGGTTGCAACACTCAAACAAGTCAGACGCCGCCCTGCTGCGGGCATCAAACCTAACACTAGCATT
CTCAGCTTCTTTCGCCCTGCCGAAAAACAAGAAGAATCTCTCTTTGTTGGCTCAAGGCCCGTGCCCCTTTGCCTC
GACGGTGGCGAAAACCGCTTCAATGAGTCGAATGCGCCCTCGAAGAAACAACGGCTCAGTGTCCTCAGTGAAGCG
GGCCTGACCGTCGCTCCTACAGACTCTGGTCAAGATGAGACTTCCAACAGAAACTCGGACGACGACAAGAATAAT
CCTGCTTCATCACGGCCGACTGGCCTCCCTTTTGTCTTTGACTCGGATTCGGACGATGAGCCAGACGAGTCTAGC
GACAGTAAACGTCTCAGAATAGATGCCATCGATAATGCTGTACCGGACGATTCACGCGCGTCGCTTGACGAGATT
TATGAGGCGGAACAAGATGACCAAGGCGAGGAAACACGCCTCATGCGACTCTTTGCAGCCGAAGAGGGAGACGCG
TCCTTGCTTGATGATGGCCAAGAGACGATGATCGATACATGTCCCATTTGTGATTATAGTTTGTCAGGATGTTCG
TCTGACGATGCAACTCGCCATGTCAACATGTGTCTGGATAGCAATGGAGGAGAATCTGTGCCCAGTCCACCACCT
CAAGTCCACCATGTGGATTCCAGTCTTTTGAGCAAGAGATTTGCCCGAGCCGCCATCCCGAAGCCCGCCCAGGCC
AATCCTTTGCCAATCGACGACTGCAACCCAGATGCCAAAACTGCCTTTTCCACCCTCATGTCTGGCAATGCCGAG
GACTCGGCCTGGGCCACGGCAGCCGCGGCAGAGCATGCATCTCACGGCCGGCCCGCGTACCAAAGGACTTGTCCA
TTCTACAAGATTATACCTGGCTTCAACATATGCGTCGATGCCTTTCGCTATGGCGCCGTGCAAGGCTGTGAAGCC
TACTTTCTGAGCCACTTTCACAGCGACCACTACATGGGCCTCACTGCCAACTGGACCCATGGACCAATATATTGC
AGCGGAGTCACAGGTCGTCTTGTCAAGCAGCAGCTCAGGACTGCTGCTAAATGGGTCGTTGAACTCGAGTTCGAC
AAGTCCTATGACATTCCAGGAACCGACGCCTCTGTCACCATGATTGCGGCAAATCACTGTCCTGGAAGTAGCCTC
TTTCTCTTTCAAAAATTTGTCAAAACAGCCGCCAGCCAGCGAGTGCAGCGCATTCTGCACTGCGGTGATTTCCGC
GCCTGTCCAGCCCACATTGCTCACCCCTTGCTCAAGCCAGATATTGTCGAAGCTGTGACTGGAAAGATGAATAGG
CAAAGCATCAATGTGTGCTACCTTGACACGACATATCTCAATCCACGCTATTCTTTTCCTCCACAGGAGCACGTC
ATCAAAGCTTGCGCCGACTTGTGCGCCTCCATGTCTCCAGACCCTGACTGCAAAGACGATGTTTGGGACCGCTCT
TCCAGAGCTGCCGGCGACCAAGCAGTGAGCAAATTTTTTCACGAGACCAAGACAGAGCGTCTAGACGGGTCTGAG
AAGAAGCCAGCTAGGTCTCGACAACGCTTGCTCGTTGTTTGCGGTACCTACTCCATTGGGAAAGAGCGCATATGC
GTAGCCATTGCCAAGGCTCTGGGATCAAAGATATTCGTCACCTCGGCCAAGGCCAAGATATTCCGACAGCTTCAA
GATGCCGAGCTTACATCATTGCTCACGTCGGATCCCCTCGAGGCCCAGGTGCACATGCAATCCCTCATGGAGATT
CGCGCAGAGACGCTTCAGGATTATCTGAGCAGCTATAAGCCTCATTTCAGCCGCATAGTTGGCTTTCGTCCCAGC
GGCTGGACCTTTCGCCCTAGCAACGGCAAGACTGTCGGCGCCAACACACCGCCCGGCACCGTCGCTACCCAGGAA
ATCTTGCACGGCAAGGGCTGGAGGACGAGCTTTGGCTACAAGGACTTGATGCACCAAAGAGGCAGCACCAAGGAA
GCCATGTGTTTTGGAGTGCCCTATTCGGAGCACAGCAGTTTTCGAGAATTAGCAATGTTTATAATGGCGCTGCGC
ATCGAAAAGGTGATTCCCACGGTAAATGTGGGCAGCGAGCAGTCGAGGAAGAGAATGAAGGGCTGGATTGACCGC
TGGATGGCGGAACGGCGGCGCGGCGGGCTCATCAAGGTGTTGGTGGAGGGGAGTGATGAAGATGAAGAGCTGTGG
CAAGGGGATCCAGCACGAGGGCGAGGTGTCTGGTGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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