Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|3358
Gene name
LocationContig_213:12853..14684
Strand-
Gene length (bp)1831
Transcript length (bp)1533
Coding sequence length (bp)1533
Protein length (aa) 511

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00515 TPR_1 Tetratricopeptide repeat 1.8E-08 37 67
PF07719 TPR_2 Tetratricopeptide repeat 2.2E-06 37 66
PF13424 TPR_12 Tetratricopeptide repeat 2.3E-07 35 97
PF13181 TPR_8 Tetratricopeptide repeat 7.2E-06 37 67
PF13174 TPR_6 Tetratricopeptide repeat 9.5E-02 39 64
PF00564 PB1 PB1 domain 9.6E-08 421 497
PF13176 TPR_7 Tetratricopeptide repeat 4.3E-06 39 68

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O77775|NCF2_BOVIN Neutrophil cytosol factor 2 OS=Bos taurus GN=NCF2 PE=2 SV=1 1 215 1.0E-37
sp|P19878|NCF2_HUMAN Neutrophil cytosol factor 2 OS=Homo sapiens GN=NCF2 PE=1 SV=2 1 215 7.0E-36
sp|O70145|NCF2_MOUSE Neutrophil cytosol factor 2 OS=Mus musculus GN=Ncf2 PE=1 SV=1 1 222 9.0E-34
sp|Q86UR1|NOXA1_HUMAN NADPH oxidase activator 1 OS=Homo sapiens GN=NOXA1 PE=1 SV=1 2 226 2.0E-26
sp|A7E3N7|NOXA1_RAT NADPH oxidase activator 1 OS=Rattus norvegicus GN=Noxa1 PE=2 SV=1 2 223 8.0E-26
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Swissprot ID Swissprot Description Start End E-value
sp|O77775|NCF2_BOVIN Neutrophil cytosol factor 2 OS=Bos taurus GN=NCF2 PE=2 SV=1 1 215 1.0E-37
sp|P19878|NCF2_HUMAN Neutrophil cytosol factor 2 OS=Homo sapiens GN=NCF2 PE=1 SV=2 1 215 7.0E-36
sp|O70145|NCF2_MOUSE Neutrophil cytosol factor 2 OS=Mus musculus GN=Ncf2 PE=1 SV=1 1 222 9.0E-34
sp|Q86UR1|NOXA1_HUMAN NADPH oxidase activator 1 OS=Homo sapiens GN=NOXA1 PE=1 SV=1 2 226 2.0E-26
sp|A7E3N7|NOXA1_RAT NADPH oxidase activator 1 OS=Rattus norvegicus GN=Noxa1 PE=2 SV=1 2 223 8.0E-26
sp|Q8CJ00|NOXA1_MOUSE NADPH oxidase activator 1 OS=Mus musculus GN=Noxa1 PE=1 SV=1 2 204 6.0E-24
sp|Q867T7|NCFA_DICDI NADPH oxidase activator OS=Dictyostelium discoideum GN=ncfA PE=2 SV=1 3 128 2.0E-19
sp|A7E3N2|NCF2_RAT Neutrophil cytosol factor 2 OS=Rattus norvegicus GN=Ncf2 PE=2 SV=1 1 222 4.0E-12
sp|B0JVY3|YCF3_MICAN Photosystem I assembly protein Ycf3 OS=Microcystis aeruginosa (strain NIES-843) GN=ycf3 PE=3 SV=1 22 77 7.0E-06
sp|B7KKZ8|YCF3_CYAP7 Photosystem I assembly protein Ycf3 OS=Cyanothece sp. (strain PCC 7424) GN=ycf3 PE=3 SV=1 24 77 9.0E-06
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 51 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|3358
MSLKQEIESWVAALARYDNNEFDEALGEFDKISDTSKILFNMGVIHATLGEHEKAVECYQRAIRLDQYLAVAYFQ
QGVSNFLLGDFEEALANFNDTLLYLRGNTMIDYAQLGLLFKLYSCEVLFNRGLCYIYLEQKDAGMQDLSYAVKEK
VVEDHNVIDEAIREEAEGYTVFSIPVGVVYRPNEAKVRNLKTKDYLGKARLVAASDRTNAFTGFAGSEIKNAGKN
EVKDDRPADNISFAATNLVKPGLQSRKPQVDSPANRNVFPPTPPPENDRPSRGASVRNGPKPMPAKLNIPSQEAR
KYERAFSPQDGRQWPARSASAAPGKNYAQREASRRPSRQRERDEEDDYPGELYDMYGAGGSRGSRGSRRARQPRY
IEEEENSDYDDGSLDGAEFEMVSNNRRGPSSRSGSRAASRRPDIRKIRVKVHADDVRYIMIGTAIEFSDLVGVVR
DKFGLRRRFKIKFKDEDAPDGDMITMGDQEDLDMALQGAKSAAKRQRLETAKLEIWIYEA*
Coding >OphauB2|3358
ATGTCATTGAAACAGGAAATCGAGAGCTGGGTTGCCGCCTTGGCACGATATGACAATAATGAATTCGACGAAGCT
CTTGGCGAATTTGACAAGATTTCCGATACCAGCAAGATTCTCTTCAACATGGGAGTTATCCATGCCACTCTTGGA
GAACATGAAAAGGCTGTTGAATGCTACCAGCGAGCAATCCGACTCGACCAGTATCTTGCCGTTGCATATTTTCAA
CAGGGGGTATCAAATTTCCTCCTTGGCGATTTTGAAGAGGCTCTTGCCAATTTCAATGACACGCTCCTCTATCTC
CGCGGCAATACAATGATCGACTATGCCCAACTTGGGCTCTTGTTCAAACTCTATTCGTGCGAGGTGCTCTTTAAC
AGGGGTCTATGTTACATTTACTTGGAACAAAAAGACGCTGGCATGCAGGACTTGTCCTATGCTGTCAAGGAAAAA
GTGGTTGAGGATCACAACGTCATTGACGAAGCTATTCGCGAAGAAGCCGAGGGTTATACCGTCTTCTCTATCCCC
GTTGGAGTGGTGTACCGACCAAACGAGGCCAAAGTGCGGAATCTCAAGACCAAGGACTATCTGGGCAAGGCAAGA
CTGGTTGCGGCATCGGATCGCACCAACGCATTTACTGGGTTTGCCGGCTCTGAAATCAAGAATGCTGGCAAGAAT
GAAGTCAAAGACGATCGTCCGGCGGACAACATATCATTTGCCGCTACAAACCTCGTGAAGCCTGGCCTTCAATCA
CGGAAACCACAAGTCGATTCACCCGCAAATCGCAATGTTTTCCCCCCGACGCCACCCCCGGAGAATGATCGTCCA
AGTCGCGGTGCATCAGTCCGAAATGGCCCCAAGCCAATGCCTGCCAAGCTGAACATACCTTCGCAAGAGGCTAGA
AAATATGAGAGAGCATTCTCACCGCAAGACGGCCGACAGTGGCCCGCAAGATCGGCGTCTGCTGCACCCGGCAAG
AATTATGCCCAGCGAGAAGCATCGCGTCGACCTTCAAGACAAAGGGAGAGAGATGAAGAGGATGATTATCCTGGA
GAGCTATATGATATGTATGGGGCCGGCGGCTCGAGGGGCTCGAGAGGAAGTCGAAGAGCCCGTCAACCGAGATAT
ATCGAAGAAGAAGAGAACTCAGACTACGACGACGGCTCGCTTGACGGAGCAGAGTTCGAAATGGTATCTAACAAT
CGTCGTGGTCCCAGTTCGAGATCGGGATCGCGCGCTGCTTCGCGCCGGCCTGATATTCGCAAGATTAGAGTCAAA
GTCCACGCAGATGATGTGCGCTATATTATGATTGGAACCGCCATTGAATTCTCGGATCTGGTGGGCGTTGTCAGA
GACAAATTTGGTCTTCGACGTCGTTTCAAGATCAAGTTCAAGGACGAGGATGCTCCGGATGGAGATATGATCACC
ATGGGAGACCAGGAAGATCTAGACATGGCTCTGCAAGGCGCAAAGAGCGCAGCCAAGAGACAGAGGCTTGAGACT
GCCAAGTTGGAGATATGGATTTACGAGGCGTAG
Transcript >OphauB2|3358
ATGTCATTGAAACAGGAAATCGAGAGCTGGGTTGCCGCCTTGGCACGATATGACAATAATGAATTCGACGAAGCT
CTTGGCGAATTTGACAAGATTTCCGATACCAGCAAGATTCTCTTCAACATGGGAGTTATCCATGCCACTCTTGGA
GAACATGAAAAGGCTGTTGAATGCTACCAGCGAGCAATCCGACTCGACCAGTATCTTGCCGTTGCATATTTTCAA
CAGGGGGTATCAAATTTCCTCCTTGGCGATTTTGAAGAGGCTCTTGCCAATTTCAATGACACGCTCCTCTATCTC
CGCGGCAATACAATGATCGACTATGCCCAACTTGGGCTCTTGTTCAAACTCTATTCGTGCGAGGTGCTCTTTAAC
AGGGGTCTATGTTACATTTACTTGGAACAAAAAGACGCTGGCATGCAGGACTTGTCCTATGCTGTCAAGGAAAAA
GTGGTTGAGGATCACAACGTCATTGACGAAGCTATTCGCGAAGAAGCCGAGGGTTATACCGTCTTCTCTATCCCC
GTTGGAGTGGTGTACCGACCAAACGAGGCCAAAGTGCGGAATCTCAAGACCAAGGACTATCTGGGCAAGGCAAGA
CTGGTTGCGGCATCGGATCGCACCAACGCATTTACTGGGTTTGCCGGCTCTGAAATCAAGAATGCTGGCAAGAAT
GAAGTCAAAGACGATCGTCCGGCGGACAACATATCATTTGCCGCTACAAACCTCGTGAAGCCTGGCCTTCAATCA
CGGAAACCACAAGTCGATTCACCCGCAAATCGCAATGTTTTCCCCCCGACGCCACCCCCGGAGAATGATCGTCCA
AGTCGCGGTGCATCAGTCCGAAATGGCCCCAAGCCAATGCCTGCCAAGCTGAACATACCTTCGCAAGAGGCTAGA
AAATATGAGAGAGCATTCTCACCGCAAGACGGCCGACAGTGGCCCGCAAGATCGGCGTCTGCTGCACCCGGCAAG
AATTATGCCCAGCGAGAAGCATCGCGTCGACCTTCAAGACAAAGGGAGAGAGATGAAGAGGATGATTATCCTGGA
GAGCTATATGATATGTATGGGGCCGGCGGCTCGAGGGGCTCGAGAGGAAGTCGAAGAGCCCGTCAACCGAGATAT
ATCGAAGAAGAAGAGAACTCAGACTACGACGACGGCTCGCTTGACGGAGCAGAGTTCGAAATGGTATCTAACAAT
CGTCGTGGTCCCAGTTCGAGATCGGGATCGCGCGCTGCTTCGCGCCGGCCTGATATTCGCAAGATTAGAGTCAAA
GTCCACGCAGATGATGTGCGCTATATTATGATTGGAACCGCCATTGAATTCTCGGATCTGGTGGGCGTTGTCAGA
GACAAATTTGGTCTTCGACGTCGTTTCAAGATCAAGTTCAAGGACGAGGATGCTCCGGATGGAGATATGATCACC
ATGGGAGACCAGGAAGATCTAGACATGGCTCTGCAAGGCGCAAAGAGCGCAGCCAAGAGACAGAGGCTTGAGACT
GCCAAGTTGGAGATATGGATTTACGAGGCGTAG
Gene >OphauB2|3358
ATGTCATTGAAACAGGTGAGCATACATTCAAATACTGCTGACTGGCAAGTCGCATTCTAAATCAGAGTCAAGGAA
ATCGAGAGCTGGGTTGCCGCCTTGGCACGATATGACAATAATGAATTCGACGAAGCTCTTGGCGAATTTGACAAG
ATTTCCGATACCAGCAAGATTCTCTTCAACATGGGAGTTATCCATGCCACTCTTGGAGAACATGAAAAGGCTGTG
GGTACCTGCGTGCCTCCTGCTACTGTCCCTGTCTGAGTACTGACCACGCTGCTTTTTTTCAGGTTGAATGCTACC
AGCGAGCAATCCGACTCGACCAGTATCTTGCCGTTGCATATTTTCAACAGGGGGTATCAAATTTCCTCCTTGGCG
ATTTTGAAGAGGCTCTTGCCAATTTCAATGACACGCTCCTCTATCTCCGCGGCAATACAATGATCGACTATGCCC
AACTTGGGCTCTTGTTCAAACTCTATTCGTGCGAGGTGCTCTTTAACAGGGGTCTATGTTACATTTACTTGGAAC
AAAAAGACGCTGGCATGCAGGACTTGTCCTATGCTGTCAAGGAAAAAGTGGTTGAGGATCACAACGTCATTGACG
AAGCTATTCGCGAAGAAGCCGAGGTAAGGCAACATTTCAGTGGAAATGATTACTGGCCATGTTTTAATACGGTTA
CAGGGTTATACCGTCTTCTCTATCCCCGTTGGAGTGGTGTACCGACCAAACGAGGCCAAAGTGCGGAATCTCAAG
ACCAAGGACTATCTGGGCAAGGCAAGACTGGTTGCGGCATCGGATCGCACCAACGCATTTACTGGGTTTGCCGGC
TCTGAAATCAAGAATGTGAGTTGTTTGCGCTTACTCAATGCCTCGGCTACAAGTATTTACTGGGCATTTTGCAGG
CTGGCAAGAATGAAGTCAAAGACGATCGTCCGGCGGACAACATATCATTTGCCGCTACAAACCTCGTGAAGCCTG
GCCTTCAATCACGGAAACCACAAGTCGATTCACCCGCAAATCGCAATGTTTTCCCCCCGACGCCACCCCCGGAGA
ATGATCGTCCAAGTCGCGGTGCATCAGTCCGAAATGGCCCCAAGCCAATGCCTGCCAAGCTGAACATACCTTCGC
AAGAGGCTAGAAAATATGAGAGAGCATTCTCACCGCAAGACGGCCGACAGTGGCCCGCAAGATCGGCGTCTGCTG
CACCCGGCAAGAATTATGCCCAGCGAGAAGCATCGCGTCGACCTTCAAGACAAAGGGAGAGAGATGAAGAGGATG
ATTATCCTGGAGAGCTATATGATATGTATGGGGCCGGCGGCTCGAGGGGCTCGAGAGGAAGTCGAAGAGCCCGTC
AACCGAGATATATCGAAGAAGAAGAGAACTCAGACTACGACGACGGCTCGCTTGACGGAGCAGAGTTCGAAATGG
TATCTAACAATCGTCGTGGTCCCAGTTCGAGATCGGGATCGCGCGCTGCTTCGCGCCGGCCTGATATTCGCAAGA
TTAGAGTCAAAGTCCACGCAGATGATGTGCGCTATATTATGATTGGAACCGCCATTGAATTCTCGGATCTGGTGG
GCGTTGTCAGAGACAAATTTGGTCTTCGACGTCGTTTCAAGATCAAGTTCAAGGACGAGGATGCTCCGGATGGAG
ATATGATCACCATGGGAGACCAGGAAGATCTAGACATGGCTCTGCAAGGCGCAAAGAGCGCAGCCAAGAGACAGA
GGCTTGAGACTGCCAAGTTGGAGGTGAGTTTAATCTCGTGTTAGGAGCAATGCCATTTGCTGAAGTTTATTAACG
CATATTTTAGATATGGATTTACGAGGCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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