Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|3351
Gene name
Location	Contig_212:26365..27226
Strand	-
Gene length (bp)	861
Transcript length (bp)	738
Coding sequence length (bp)	738
Protein length (aa)	246

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12351	Fig1	Ca2+ regulator and membrane fusion protein Fig1	2.5E-58	53	235
PF06687	SUR7	SUR7/PalI family	4.0E-08	2	227

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005886	plasma membrane	Yes
GO:0016020	membrane	Yes
GO:0110165	cellular anatomical entity	No
GO:0005575	cellular_component	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 21	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	2	24	22
2	114	136	22
3	165	187	22
4	212	234	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|3351 MILIAVAIILLSLLLAGCSSSSPLIPDIFLLSLYYKNYEAIPDTSQVDYNIHTAIENIAGDASLQARVGYFGICV NPDGGSWLCSNNATALAKEVSVDQDPLNLIWLAAQFKDMIVFPYLIIIAIIFAFLCFLLLATFPGWHEEEDSEGS EREVKPFPSRPVSQVALAIIFIASIFVLVSVLWQHTASVAASIIAQDFGNGAVKSGVGTSAMVIGWFSFALLIIV TIGLLAMILSIRVLGQLMRD*
Coding	>OphauB2\|3351 ATGATCCTCATCGCCGTTGCTATAATTCTCTTGTCATTACTGCTCGCTGGCTGCTCGTCTTCATCACCTCTCATC CCAGACATATTCCTCCTCTCGCTCTACTACAAAAACTACGAGGCCATACCCGACACATCTCAAGTCGATTACAAC ATCCACACGGCTATTGAAAACATTGCCGGAGATGCCAGCCTGCAGGCTCGGGTGGGATACTTTGGCATTTGCGTC AACCCCGATGGCGGCTCATGGCTGTGCAGCAACAACGCCACGGCTCTCGCCAAGGAGGTTTCAGTGGACCAAGAT CCTCTCAATCTCATTTGGCTGGCGGCCCAGTTCAAGGACATGATTGTCTTCCCCTACCTCATCATCATTGCCATC ATATTTGCCTTTCTCTGCTTTCTTCTCCTCGCCACATTCCCCGGCTGGCACGAAGAAGAGGACTCGGAAGGCTCC GAACGCGAAGTCAAGCCGTTTCCCTCGCGGCCCGTGTCTCAAGTTGCCCTCGCCATCATCTTCATCGCCTCCATC TTTGTCTTGGTTTCGGTTCTTTGGCAGCACACAGCCTCGGTCGCTGCATCGATAATTGCCCAGGACTTTGGTAAC GGAGCTGTTAAGAGTGGTGTCGGCACCAGCGCCATGGTTATAGGCTGGTTTTCTTTTGCCCTCCTCATCATTGTC ACCATAGGCCTGCTTGCCATGATTCTCAGCATACGTGTCTTGGGCCAGCTAATGCGCGACTAG
Transcript	>OphauB2\|3351 ATGATCCTCATCGCCGTTGCTATAATTCTCTTGTCATTACTGCTCGCTGGCTGCTCGTCTTCATCACCTCTCATC CCAGACATATTCCTCCTCTCGCTCTACTACAAAAACTACGAGGCCATACCCGACACATCTCAAGTCGATTACAAC ATCCACACGGCTATTGAAAACATTGCCGGAGATGCCAGCCTGCAGGCTCGGGTGGGATACTTTGGCATTTGCGTC AACCCCGATGGCGGCTCATGGCTGTGCAGCAACAACGCCACGGCTCTCGCCAAGGAGGTTTCAGTGGACCAAGAT CCTCTCAATCTCATTTGGCTGGCGGCCCAGTTCAAGGACATGATTGTCTTCCCCTACCTCATCATCATTGCCATC ATATTTGCCTTTCTCTGCTTTCTTCTCCTCGCCACATTCCCCGGCTGGCACGAAGAAGAGGACTCGGAAGGCTCC GAACGCGAAGTCAAGCCGTTTCCCTCGCGGCCCGTGTCTCAAGTTGCCCTCGCCATCATCTTCATCGCCTCCATC TTTGTCTTGGTTTCGGTTCTTTGGCAGCACACAGCCTCGGTCGCTGCATCGATAATTGCCCAGGACTTTGGTAAC GGAGCTGTTAAGAGTGGTGTCGGCACCAGCGCCATGGTTATAGGCTGGTTTTCTTTTGCCCTCCTCATCATTGTC ACCATAGGCCTGCTTGCCATGATTCTCAGCATACGTGTCTTGGGCCAGCTAATGCGCGACTAG
Gene	>OphauB2\|3351 ATGATCCTCATCGCCGTTGCTATAATTCTCTTGTGTACGTTTGAGCGCAAGGGAAAGAAAAACAAAGGCTGTTGC TGGCTCGGAGCTGACAAGGTCTTTTATGCAGCATTACTGCTCGCTGGCTGCTCGTCTTCATCACCTCTCATCCCA GACATATTCCTCCTCTCGCTCTACTACAAAAACTACGAGGCCATACCCGACACATCTCAAGTCGATTACAACATC CACACGGCTATTGAAAACATTGCCGGAGATGCCAGCCTGCAGGCTCGGGTGGGATACTTTGGCATTTGCGTCAAC CCCGATGGCGGCTCATGGCTGTGCAGCAACAACGCCACGGCTCTCGCCAAGGAGGTTTCAGTGGACCAAGATCCT CTCAATCTCATTTGGCTGGCGGCCCAGTTCAAGGACATGATTGTCTTCCCCTACCTCATGTCAGTGTCTTGAAAG CGCGACGCGGTGCTCCCGCTAACTGTTCCCACCAGCATCATTGCCATCATATTTGCCTTTCTCTGCTTTCTTCTC CTCGCCACATTCCCCGGCTGGCACGAAGAAGAGGACTCGGAAGGCTCCGAACGCGAAGTCAAGCCGTTTCCCTCG CGGCCCGTGTCTCAAGTTGCCCTCGCCATCATCTTCATCGCCTCCATCTTTGTCTTGGTTTCGGTTCTTTGGCAG CACACAGCCTCGGTCGCTGCATCGATAATTGCCCAGGACTTTGGTAACGGAGCTGTTAAGAGTGGTGTCGGCACC AGCGCCATGGTTATAGGCTGGTTTTCTTTTGCCCTCCTCATCATTGTCACCATAGGCCTGCTTGCCATGATTCTC AGCATACGTGTCTTGGGCCAGCTAATGCGCGACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail