© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|3340 |
| Gene name | |
| Location | Contig_211:20925..22770 |
| Strand | + |
| Gene length (bp) | 1845 |
| Transcript length (bp) | 1791 |
| Coding sequence length (bp) | 1791 |
| Protein length (aa) | 597 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.3E-11 | 99 | 481 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94343|YHMA_SCHPO | Uncharacterized MFS-type transporter C1271.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1271.10c PE=1 SV=1 | 35 | 279 | 3.0E-19 |
| sp|P53389|HOL1_YEAST | Protein HOL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HOL1 PE=1 SV=1 | 56 | 277 | 2.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 93 | 115 | 22 |
| 2 | 130 | 152 | 22 |
| 3 | 159 | 178 | 19 |
| 4 | 188 | 207 | 19 |
| 5 | 220 | 242 | 22 |
| 6 | 247 | 269 | 22 |
| 7 | 347 | 369 | 22 |
| 8 | 384 | 406 | 22 |
| 9 | 419 | 441 | 22 |
| 10 | 461 | 483 | 22 |
| 11 | 516 | 534 | 18 |
| 12 | 544 | 566 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|3340 MSWTAEQVAKPPSVHSAKEKTASRYLYQHEIASTFRKPVPPPLLTASTRSFSLGSHSKAIKYGSGKHANVELVPQ PSDDASDPLNWPRWRRDLNLVSLLMTAGLVGAMKTAFVSTSGSMAMHFATSYSAIAALSALPLFLSALTGLASCL AAKIWGKRPVYLVSALVLLIGCAWNATTRDSYGACMGARVLQGLGWGAFDTLVIASIQDTYFEHERSLPLSLYTL FVLATTWGSPLLGGVASHHDGSFTTQFAIISSLFALALPLLVLGAPETAFDRPAPGSSPMRTPGLDFNMPRRRYP WRLGHWFHGRLVLAYLKQMKPVSYHGHVSMSTFLQAPRAFVAPTTGLLALLSLIPYSTLWGLALSLALLVSPAPL NLSPPRIGVLMAGPWLLASAVVGAFCFYRGFHSHFTRPISYTLVAAGSFLLLIGLLSFGLGLYNFMLSQPLRGPM MLFQPFSSQAASQLSPALLSFQLGVLAAAVCVIDTATRPVLARSASFTSPRIAVAHRSMADMNAGLVVMRSLAAS AFVAAMPSLVSSPSGLKDLAIGLAVTQAVISLAVVLLWHFFEKTIWRADGRIMGLVDLRMLKYTGSFFDYN* |
| Coding | >OphauB2|3340 ATGAGTTGGACGGCTGAACAAGTTGCCAAGCCGCCGTCGGTTCACTCGGCCAAGGAAAAGACGGCCTCGCGCTAC TTGTACCAGCACGAGATTGCCAGCACCTTTAGGAAGCCGGTGCCGCCGCCGCTGCTGACGGCTTCGACACGATCC TTTTCCCTTGGCTCCCATTCCAAGGCCATCAAGTATGGCTCAGGCAAGCATGCCAATGTTGAGCTGGTGCCGCAG CCTAGTGACGACGCTTCAGACCCTTTGAACTGGCCGCGCTGGAGACGCGACTTGAATCTAGTCTCACTGCTCATG ACGGCTGGGCTGGTGGGCGCCATGAAGACGGCTTTTGTGTCGACTAGCGGCAGCATGGCCATGCACTTTGCCACG TCCTACTCGGCCATTGCTGCCCTTAGCGCTCTTCCCCTTTTTCTCTCGGCCCTGACTGGGCTTGCCAGCTGCCTG GCGGCCAAGATTTGGGGCAAGCGGCCCGTCTATCTCGTCTCTGCCCTCGTGCTGCTCATTGGCTGTGCCTGGAAC GCCACCACTCGAGACAGCTATGGCGCCTGTATGGGCGCCCGCGTCTTGCAGGGCCTCGGCTGGGGCGCCTTTGAC ACGCTGGTCATTGCAAGCATCCAGGACACCTACTTTGAGCACGAGCGCAGCCTGCCCCTCTCTCTCTATACCCTC TTTGTCCTGGCCACCACTTGGGGCTCGCCTCTGCTTGGCGGCGTGGCTTCGCACCACGACGGCTCCTTTACCACG CAGTTTGCCATCATCAGCAGCCTCTTTGCCCTTGCTCTCCCTCTGCTGGTCCTGGGCGCCCCCGAGACGGCTTTT GACCGGCCCGCACCCGGCTCTAGTCCCATGCGAACTCCTGGCCTCGACTTCAACATGCCTCGTCGCCGCTATCCA TGGCGCCTCGGCCACTGGTTCCATGGCCGCCTGGTGCTCGCCTACCTCAAGCAGATGAAGCCCGTCTCCTATCAC GGCCATGTGTCAATGTCGACCTTTCTTCAGGCTCCCCGCGCCTTTGTCGCCCCCACCACTGGCCTCTTGGCTCTG CTCTCCCTCATTCCATACAGCACCCTTTGGGGACTTGCCCTGTCGCTGGCGCTGCTTGTCTCGCCCGCCCCTCTC AACTTGAGTCCGCCACGCATCGGCGTCCTCATGGCTGGCCCCTGGCTTCTGGCCAGCGCCGTTGTTGGCGCCTTT TGCTTCTACCGCGGCTTCCACAGCCACTTCACGCGCCCCATTAGCTACACCCTAGTCGCTGCCGGCTCCTTTCTC CTCCTCATTGGCCTGCTTTCCTTTGGCCTGGGCCTCTACAACTTTATGCTGTCGCAGCCTCTGCGAGGGCCCATG ATGCTCTTTCAGCCATTTAGCTCCCAGGCCGCCAGCCAGCTGAGTCCTGCTCTGCTCTCCTTTCAACTCGGCGTC CTTGCCGCTGCTGTCTGTGTCATTGACACGGCCACGCGCCCCGTTCTGGCCCGCTCTGCCTCCTTTACCTCTCCA CGCATTGCCGTTGCCCACCGCTCCATGGCCGATATGAATGCCGGCCTTGTCGTGATGCGCAGCCTTGCCGCCTCG GCTTTCGTCGCTGCCATGCCCAGCCTTGTTTCCTCGCCCTCTGGGCTCAAGGATCTGGCTATTGGCCTTGCCGTG ACACAAGCCGTCATTTCTCTTGCCGTCGTGTTGCTATGGCACTTTTTTGAAAAGACGATTTGGCGCGCCGACGGC CGCATCATGGGGCTTGTCGACTTGCGCATGCTCAAGTACACGGGCAGCTTCTTCGACTACAACTAG |
| Transcript | >OphauB2|3340 ATGAGTTGGACGGCTGAACAAGTTGCCAAGCCGCCGTCGGTTCACTCGGCCAAGGAAAAGACGGCCTCGCGCTAC TTGTACCAGCACGAGATTGCCAGCACCTTTAGGAAGCCGGTGCCGCCGCCGCTGCTGACGGCTTCGACACGATCC TTTTCCCTTGGCTCCCATTCCAAGGCCATCAAGTATGGCTCAGGCAAGCATGCCAATGTTGAGCTGGTGCCGCAG CCTAGTGACGACGCTTCAGACCCTTTGAACTGGCCGCGCTGGAGACGCGACTTGAATCTAGTCTCACTGCTCATG ACGGCTGGGCTGGTGGGCGCCATGAAGACGGCTTTTGTGTCGACTAGCGGCAGCATGGCCATGCACTTTGCCACG TCCTACTCGGCCATTGCTGCCCTTAGCGCTCTTCCCCTTTTTCTCTCGGCCCTGACTGGGCTTGCCAGCTGCCTG GCGGCCAAGATTTGGGGCAAGCGGCCCGTCTATCTCGTCTCTGCCCTCGTGCTGCTCATTGGCTGTGCCTGGAAC GCCACCACTCGAGACAGCTATGGCGCCTGTATGGGCGCCCGCGTCTTGCAGGGCCTCGGCTGGGGCGCCTTTGAC ACGCTGGTCATTGCAAGCATCCAGGACACCTACTTTGAGCACGAGCGCAGCCTGCCCCTCTCTCTCTATACCCTC TTTGTCCTGGCCACCACTTGGGGCTCGCCTCTGCTTGGCGGCGTGGCTTCGCACCACGACGGCTCCTTTACCACG CAGTTTGCCATCATCAGCAGCCTCTTTGCCCTTGCTCTCCCTCTGCTGGTCCTGGGCGCCCCCGAGACGGCTTTT GACCGGCCCGCACCCGGCTCTAGTCCCATGCGAACTCCTGGCCTCGACTTCAACATGCCTCGTCGCCGCTATCCA TGGCGCCTCGGCCACTGGTTCCATGGCCGCCTGGTGCTCGCCTACCTCAAGCAGATGAAGCCCGTCTCCTATCAC GGCCATGTGTCAATGTCGACCTTTCTTCAGGCTCCCCGCGCCTTTGTCGCCCCCACCACTGGCCTCTTGGCTCTG CTCTCCCTCATTCCATACAGCACCCTTTGGGGACTTGCCCTGTCGCTGGCGCTGCTTGTCTCGCCCGCCCCTCTC AACTTGAGTCCGCCACGCATCGGCGTCCTCATGGCTGGCCCCTGGCTTCTGGCCAGCGCCGTTGTTGGCGCCTTT TGCTTCTACCGCGGCTTCCACAGCCACTTCACGCGCCCCATTAGCTACACCCTAGTCGCTGCCGGCTCCTTTCTC CTCCTCATTGGCCTGCTTTCCTTTGGCCTGGGCCTCTACAACTTTATGCTGTCGCAGCCTCTGCGAGGGCCCATG ATGCTCTTTCAGCCATTTAGCTCCCAGGCCGCCAGCCAGCTGAGTCCTGCTCTGCTCTCCTTTCAACTCGGCGTC CTTGCCGCTGCTGTCTGTGTCATTGACACGGCCACGCGCCCCGTTCTGGCCCGCTCTGCCTCCTTTACCTCTCCA CGCATTGCCGTTGCCCACCGCTCCATGGCCGATATGAATGCCGGCCTTGTCGTGATGCGCAGCCTTGCCGCCTCG GCTTTCGTCGCTGCCATGCCCAGCCTTGTTTCCTCGCCCTCTGGGCTCAAGGATCTGGCTATTGGCCTTGCCGTG ACACAAGCCGTCATTTCTCTTGCCGTCGTGTTGCTATGGCACTTTTTTGAAAAGACGATTTGGCGCGCCGACGGC CGCATCATGGGGCTTGTCGACTTGCGCATGCTCAAGTACACGGGCAGCTTCTTCGACTACAACTAG |
| Gene | >OphauB2|3340 ATGAGTTGGACGGCTGAACAAGTTGCCAAGCCGCCGTCGGTTCACTCGGCCAAGGAAAAGACGGCCTCGCGCTAC TTGTACCAGCACGAGATTGCCAGCACCTTTAGGAAGCCGGTGCCGCCGCCGCTGCTGACGGCTTCGACACGATCC TTTTCCCTTGGCTCCCATTCCAAGGCCATCAAGTATGGCTCAGGCAAGCATGCCAATGTTGAGCTGGTGCCGCAG CCTAGTGACGACGCTTCAGACCCTTTGGTTTGTCTCGCCCCTTGCTTGGCCACATGTCGACTGGCACTGACTAGT TGAAAGAACTGGCCGCGCTGGAGACGCGACTTGAATCTAGTCTCACTGCTCATGACGGCTGGGCTGGTGGGCGCC ATGAAGACGGCTTTTGTGTCGACTAGCGGCAGCATGGCCATGCACTTTGCCACGTCCTACTCGGCCATTGCTGCC CTTAGCGCTCTTCCCCTTTTTCTCTCGGCCCTGACTGGGCTTGCCAGCTGCCTGGCGGCCAAGATTTGGGGCAAG CGGCCCGTCTATCTCGTCTCTGCCCTCGTGCTGCTCATTGGCTGTGCCTGGAACGCCACCACTCGAGACAGCTAT GGCGCCTGTATGGGCGCCCGCGTCTTGCAGGGCCTCGGCTGGGGCGCCTTTGACACGCTGGTCATTGCAAGCATC CAGGACACCTACTTTGAGCACGAGCGCAGCCTGCCCCTCTCTCTCTATACCCTCTTTGTCCTGGCCACCACTTGG GGCTCGCCTCTGCTTGGCGGCGTGGCTTCGCACCACGACGGCTCCTTTACCACGCAGTTTGCCATCATCAGCAGC CTCTTTGCCCTTGCTCTCCCTCTGCTGGTCCTGGGCGCCCCCGAGACGGCTTTTGACCGGCCCGCACCCGGCTCT AGTCCCATGCGAACTCCTGGCCTCGACTTCAACATGCCTCGTCGCCGCTATCCATGGCGCCTCGGCCACTGGTTC CATGGCCGCCTGGTGCTCGCCTACCTCAAGCAGATGAAGCCCGTCTCCTATCACGGCCATGTGTCAATGTCGACC TTTCTTCAGGCTCCCCGCGCCTTTGTCGCCCCCACCACTGGCCTCTTGGCTCTGCTCTCCCTCATTCCATACAGC ACCCTTTGGGGACTTGCCCTGTCGCTGGCGCTGCTTGTCTCGCCCGCCCCTCTCAACTTGAGTCCGCCACGCATC GGCGTCCTCATGGCTGGCCCCTGGCTTCTGGCCAGCGCCGTTGTTGGCGCCTTTTGCTTCTACCGCGGCTTCCAC AGCCACTTCACGCGCCCCATTAGCTACACCCTAGTCGCTGCCGGCTCCTTTCTCCTCCTCATTGGCCTGCTTTCC TTTGGCCTGGGCCTCTACAACTTTATGCTGTCGCAGCCTCTGCGAGGGCCCATGATGCTCTTTCAGCCATTTAGC TCCCAGGCCGCCAGCCAGCTGAGTCCTGCTCTGCTCTCCTTTCAACTCGGCGTCCTTGCCGCTGCTGTCTGTGTC ATTGACACGGCCACGCGCCCCGTTCTGGCCCGCTCTGCCTCCTTTACCTCTCCACGCATTGCCGTTGCCCACCGC TCCATGGCCGATATGAATGCCGGCCTTGTCGTGATGCGCAGCCTTGCCGCCTCGGCTTTCGTCGCTGCCATGCCC AGCCTTGTTTCCTCGCCCTCTGGGCTCAAGGATCTGGCTATTGGCCTTGCCGTGACACAAGCCGTCATTTCTCTT GCCGTCGTGTTGCTATGGCACTTTTTTGAAAAGACGATTTGGCGCGCCGACGGCCGCATCATGGGGCTTGTCGAC TTGCGCATGCTCAAGTACACGGGCAGCTTCTTCGACTACAACTAG |