Protein ID | OphauB2|3337 |
Gene name | |
Location | Contig_211:13101..14358 |
Strand | + |
Gene length (bp) | 1257 |
Transcript length (bp) | 1257 |
Coding sequence length (bp) | 1257 |
Protein length (aa) | 419 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04666 | Glyco_transf_54 | N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region | 7.3E-11 | 66 | 232 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 26 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 26 | 19 |
2 | 249 | 271 | 22 |
3 | 288 | 310 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|3337 MLLTRLNGGFWLVWLSLFIFCYFNSFDDPTSLFYDVGRAYEQRFSLERAKEARDYLEHLPNKVEQAGKKAKFLCI GVPSINRTSESFLGYTIATLADSIPPKDRASIHLVVLVADKSPQNHFAYSQLWLANIADEVLLYGHGQTSGSNNS IYRTIDRNVYKEGSGRGTGRVENMRLDHSVLVETCRNYGSPYFALIEDDIIAAPNWFAKLTKGLSHVEAQSKKTG KDWLYLRLFYSEIFMGWNSEEWLLYGQNIFLLYTVVLLAFLVSMLVRSRLKRKPIAKSIRCSALPLALIMCLWLP ALIALYIVAGRVSMRRINPFAWSWHPAREMPNFGCCAQGLVFPQRHLEGVQALLRKPPYAFAGDQILEDYARDHS LAKWALEPSVLQHVGLKQSSAGDQRAEVWNFSFERQRMNTRET* |
Coding | >OphauB2|3337 ATGCTCTTGACTCGTCTCAACGGTGGCTTCTGGCTAGTATGGCTGTCACTCTTCATTTTTTGCTACTTCAACTCT TTTGACGACCCGACGTCTCTTTTCTACGACGTCGGTAGAGCCTACGAGCAAAGGTTTTCACTCGAGCGAGCTAAG GAAGCTAGAGACTACCTGGAGCATCTGCCTAACAAAGTTGAACAAGCCGGAAAGAAGGCCAAGTTTCTCTGTATC GGAGTTCCGAGCATCAATCGTACCTCTGAGTCCTTCCTTGGCTATACCATTGCCACGCTCGCCGACTCGATACCC CCCAAGGACCGCGCATCTATCCATCTTGTCGTTCTTGTCGCCGATAAATCGCCGCAGAACCACTTTGCGTATAGC CAGCTGTGGTTGGCAAATATCGCCGACGAGGTGCTGCTCTATGGCCATGGTCAGACATCTGGCAGCAACAACAGC ATATATCGCACAATAGACCGCAATGTTTATAAGGAAGGCTCTGGGCGCGGCACGGGCCGAGTTGAGAATATGCGT CTGGATCATTCGGTTCTCGTCGAAACGTGCCGCAACTACGGATCTCCTTACTTTGCGCTGATAGAGGACGACATT ATAGCCGCGCCAAACTGGTTTGCCAAGCTAACCAAGGGACTGAGTCATGTCGAGGCCCAATCCAAAAAGACTGGC AAGGACTGGCTATACCTGCGCCTTTTTTATTCCGAAATCTTCATGGGCTGGAACAGCGAGGAATGGCTATTGTAT GGTCAAAACATCTTTCTACTATACACAGTCGTCCTGCTCGCTTTTCTAGTAAGCATGCTAGTCAGAAGCCGACTT AAGCGCAAGCCTATAGCCAAATCAATTCGCTGCTCTGCTCTGCCCCTGGCACTCATCATGTGCCTCTGGCTGCCG GCTTTGATCGCTCTCTACATTGTCGCCGGGCGCGTCTCCATGAGGCGCATTAACCCATTCGCCTGGAGCTGGCAT CCAGCACGTGAGATGCCAAATTTCGGCTGCTGTGCTCAAGGGCTAGTCTTCCCGCAGCGGCATCTAGAGGGCGTC CAGGCGTTGCTGAGGAAGCCTCCTTATGCCTTTGCTGGCGACCAGATTCTCGAGGACTATGCTCGGGACCATTCG CTAGCCAAATGGGCTTTGGAGCCGAGTGTGCTGCAGCACGTGGGCTTAAAACAGTCGTCGGCGGGAGATCAGCGA GCTGAAGTTTGGAACTTTAGTTTCGAGCGGCAGCGTATGAATACTAGAGAGACATAG |
Transcript | >OphauB2|3337 ATGCTCTTGACTCGTCTCAACGGTGGCTTCTGGCTAGTATGGCTGTCACTCTTCATTTTTTGCTACTTCAACTCT TTTGACGACCCGACGTCTCTTTTCTACGACGTCGGTAGAGCCTACGAGCAAAGGTTTTCACTCGAGCGAGCTAAG GAAGCTAGAGACTACCTGGAGCATCTGCCTAACAAAGTTGAACAAGCCGGAAAGAAGGCCAAGTTTCTCTGTATC GGAGTTCCGAGCATCAATCGTACCTCTGAGTCCTTCCTTGGCTATACCATTGCCACGCTCGCCGACTCGATACCC CCCAAGGACCGCGCATCTATCCATCTTGTCGTTCTTGTCGCCGATAAATCGCCGCAGAACCACTTTGCGTATAGC CAGCTGTGGTTGGCAAATATCGCCGACGAGGTGCTGCTCTATGGCCATGGTCAGACATCTGGCAGCAACAACAGC ATATATCGCACAATAGACCGCAATGTTTATAAGGAAGGCTCTGGGCGCGGCACGGGCCGAGTTGAGAATATGCGT CTGGATCATTCGGTTCTCGTCGAAACGTGCCGCAACTACGGATCTCCTTACTTTGCGCTGATAGAGGACGACATT ATAGCCGCGCCAAACTGGTTTGCCAAGCTAACCAAGGGACTGAGTCATGTCGAGGCCCAATCCAAAAAGACTGGC AAGGACTGGCTATACCTGCGCCTTTTTTATTCCGAAATCTTCATGGGCTGGAACAGCGAGGAATGGCTATTGTAT GGTCAAAACATCTTTCTACTATACACAGTCGTCCTGCTCGCTTTTCTAGTAAGCATGCTAGTCAGAAGCCGACTT AAGCGCAAGCCTATAGCCAAATCAATTCGCTGCTCTGCTCTGCCCCTGGCACTCATCATGTGCCTCTGGCTGCCG GCTTTGATCGCTCTCTACATTGTCGCCGGGCGCGTCTCCATGAGGCGCATTAACCCATTCGCCTGGAGCTGGCAT CCAGCACGTGAGATGCCAAATTTCGGCTGCTGTGCTCAAGGGCTAGTCTTCCCGCAGCGGCATCTAGAGGGCGTC CAGGCGTTGCTGAGGAAGCCTCCTTATGCCTTTGCTGGCGACCAGATTCTCGAGGACTATGCTCGGGACCATTCG CTAGCCAAATGGGCTTTGGAGCCGAGTGTGCTGCAGCACGTGGGCTTAAAACAGTCGTCGGCGGGAGATCAGCGA GCTGAAGTTTGGAACTTTAGTTTCGAGCGGCAGCGTATGAATACTAGAGAGACATAG |
Gene | >OphauB2|3337 ATGCTCTTGACTCGTCTCAACGGTGGCTTCTGGCTAGTATGGCTGTCACTCTTCATTTTTTGCTACTTCAACTCT TTTGACGACCCGACGTCTCTTTTCTACGACGTCGGTAGAGCCTACGAGCAAAGGTTTTCACTCGAGCGAGCTAAG GAAGCTAGAGACTACCTGGAGCATCTGCCTAACAAAGTTGAACAAGCCGGAAAGAAGGCCAAGTTTCTCTGTATC GGAGTTCCGAGCATCAATCGTACCTCTGAGTCCTTCCTTGGCTATACCATTGCCACGCTCGCCGACTCGATACCC CCCAAGGACCGCGCATCTATCCATCTTGTCGTTCTTGTCGCCGATAAATCGCCGCAGAACCACTTTGCGTATAGC CAGCTGTGGTTGGCAAATATCGCCGACGAGGTGCTGCTCTATGGCCATGGTCAGACATCTGGCAGCAACAACAGC ATATATCGCACAATAGACCGCAATGTTTATAAGGAAGGCTCTGGGCGCGGCACGGGCCGAGTTGAGAATATGCGT CTGGATCATTCGGTTCTCGTCGAAACGTGCCGCAACTACGGATCTCCTTACTTTGCGCTGATAGAGGACGACATT ATAGCCGCGCCAAACTGGTTTGCCAAGCTAACCAAGGGACTGAGTCATGTCGAGGCCCAATCCAAAAAGACTGGC AAGGACTGGCTATACCTGCGCCTTTTTTATTCCGAAATCTTCATGGGCTGGAACAGCGAGGAATGGCTATTGTAT GGTCAAAACATCTTTCTACTATACACAGTCGTCCTGCTCGCTTTTCTAGTAAGCATGCTAGTCAGAAGCCGACTT AAGCGCAAGCCTATAGCCAAATCAATTCGCTGCTCTGCTCTGCCCCTGGCACTCATCATGTGCCTCTGGCTGCCG GCTTTGATCGCTCTCTACATTGTCGCCGGGCGCGTCTCCATGAGGCGCATTAACCCATTCGCCTGGAGCTGGCAT CCAGCACGTGAGATGCCAAATTTCGGCTGCTGTGCTCAAGGGCTAGTCTTCCCGCAGCGGCATCTAGAGGGCGTC CAGGCGTTGCTGAGGAAGCCTCCTTATGCCTTTGCTGGCGACCAGATTCTCGAGGACTATGCTCGGGACCATTCG CTAGCCAAATGGGCTTTGGAGCCGAGTGTGCTGCAGCACGTGGGCTTAAAACAGTCGTCGGCGGGAGATCAGCGA GCTGAAGTTTGGAACTTTAGTTTCGAGCGGCAGCGTATGAATACTAGAGAGACATAG |