© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|3307 |
| Gene name | |
| Location | Contig_21:177304..178158 |
| Strand | + |
| Gene length (bp) | 854 |
| Transcript length (bp) | 462 |
| Coding sequence length (bp) | 462 |
| Protein length (aa) | 154 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00241 | Cofilin_ADF | Cofilin/tropomyosin-type actin-binding protein | 1.1E-38 | 12 | 145 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q4I963|COFI_GIBZE | Cofilin OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=COF1 PE=3 SV=2 | 1 | 153 | 1.0E-87 |
| sp|Q6BWX4|COFI_DEBHA | Cofilin OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=COF1 PE=3 SV=1 | 1 | 150 | 2.0E-43 |
| sp|Q6FV81|COFI_CANGA | Cofilin OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=COF1 PE=3 SV=1 | 1 | 150 | 5.0E-42 |
| sp|Q6C0Y0|COFI_YARLI | Cofilin OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=COF1 PE=3 SV=1 | 1 | 150 | 6.0E-42 |
| sp|Q96VU9|COFI_OGAPD | Cofilin OS=Ogataea parapolymorpha (strain DL-1 / ATCC 26012 / NRRL Y-7560) GN=COF1 PE=2 SV=1 | 1 | 149 | 2.0E-41 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q4I963|COFI_GIBZE | Cofilin OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=COF1 PE=3 SV=2 | 1 | 153 | 1.0E-87 |
| sp|Q6BWX4|COFI_DEBHA | Cofilin OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=COF1 PE=3 SV=1 | 1 | 150 | 2.0E-43 |
| sp|Q6FV81|COFI_CANGA | Cofilin OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=COF1 PE=3 SV=1 | 1 | 150 | 5.0E-42 |
| sp|Q6C0Y0|COFI_YARLI | Cofilin OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=COF1 PE=3 SV=1 | 1 | 150 | 6.0E-42 |
| sp|Q96VU9|COFI_OGAPD | Cofilin OS=Ogataea parapolymorpha (strain DL-1 / ATCC 26012 / NRRL Y-7560) GN=COF1 PE=2 SV=1 | 1 | 149 | 2.0E-41 |
| sp|P78929|COFI_SCHPO | Cofilin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cof1 PE=1 SV=1 | 1 | 149 | 3.0E-41 |
| sp|P0CM06|COFI_CRYNJ | Cofilin OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=COF1 PE=3 SV=1 | 4 | 149 | 1.0E-40 |
| sp|P0CM07|COFI_CRYNB | Cofilin OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=COF1 PE=3 SV=1 | 4 | 149 | 1.0E-40 |
| sp|Q6CQ22|COFI_KLULA | Cofilin OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=COF1 PE=3 SV=1 | 1 | 150 | 6.0E-40 |
| sp|Q759P0|COFI_ASHGO | Cofilin OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=COF1 PE=3 SV=1 | 1 | 150 | 8.0E-40 |
| sp|Q03048|COFI_YEAST | Cofilin OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=COF1 PE=1 SV=1 | 1 | 150 | 5.0E-39 |
| sp|Q9HF97|COFI_ZYGRO | Cofilin OS=Zygosaccharomyces rouxii GN=cof1 PE=2 SV=1 | 1 | 149 | 1.0E-38 |
| sp|Q4P6E9|COFI_USTMA | Cofilin OS=Ustilago maydis (strain 521 / FGSC 9021) GN=COF1 PE=3 SV=1 | 4 | 149 | 5.0E-38 |
| sp|P37167|ACTP_ACACA | Actophorin OS=Acanthamoeba castellanii PE=1 SV=2 | 4 | 143 | 5.0E-26 |
| sp|Q9FVI1|ADF2_PETHY | Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1 | 4 | 138 | 1.0E-24 |
| sp|Q9ZSK4|ADF3_ARATH | Actin-depolymerizing factor 3 OS=Arabidopsis thaliana GN=ADF3 PE=1 SV=1 | 4 | 139 | 3.0E-24 |
| sp|Q9FVI2|ADF1_PETHY | Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1 | 4 | 138 | 1.0E-23 |
| sp|Q39250|ADF1_ARATH | Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1 | 4 | 139 | 2.0E-23 |
| sp|Q9ZSK3|ADF4_ARATH | Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=2 SV=2 | 4 | 146 | 8.0E-23 |
| sp|Q8LFH6|ADF12_ARATH | Actin-depolymerizing factor 12 OS=Arabidopsis thaliana GN=ADF12 PE=2 SV=2 | 4 | 138 | 2.0E-22 |
| sp|Q67ZM4|ADF7_ARATH | Actin-depolymerizing factor 7 OS=Arabidopsis thaliana GN=ADF7 PE=2 SV=1 | 4 | 143 | 4.0E-22 |
| sp|Q39251|ADF2_ARATH | Actin-depolymerizing factor 2 OS=Arabidopsis thaliana GN=ADF2 PE=2 SV=1 | 4 | 138 | 5.0E-22 |
| sp|Q9LQ81|ADF10_ARATH | Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1 | 2 | 138 | 5.0E-22 |
| sp|Q7XSN9|ADF6_ORYSJ | Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica GN=ADF6 PE=2 SV=2 | 2 | 143 | 8.0E-22 |
| sp|Q570Y6|ADF8_ARATH | Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2 | 2 | 138 | 1.0E-21 |
| sp|P30175|ADF_LILLO | Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1 | 2 | 138 | 2.0E-21 |
| sp|P0DJ27|COFB_DICDI | Cofilin-1B OS=Dictyostelium discoideum GN=cofB PE=1 SV=1 | 4 | 149 | 5.0E-21 |
| sp|P0DJ26|COFA_DICDI | Cofilin-1A OS=Dictyostelium discoideum GN=cofA PE=1 SV=1 | 4 | 149 | 5.0E-21 |
| sp|Q2QLT8|ADF11_ORYSJ | Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica GN=ADF11 PE=2 SV=1 | 4 | 141 | 6.0E-21 |
| sp|Q6EUH7|ADF1_ORYSJ | Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1 | 2 | 143 | 9.0E-21 |
| sp|P21566|COF2_CHICK | Cofilin-2 OS=Gallus gallus GN=CFL2 PE=1 SV=2 | 4 | 144 | 5.0E-20 |
| sp|Q9ZNT3|ADF5_ARATH | Actin-depolymerizing factor 5 OS=Arabidopsis thaliana GN=ADF5 PE=1 SV=1 | 1 | 138 | 5.0E-20 |
| sp|Q9AY76|ADF2_ORYSJ | Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica GN=ADF2 PE=2 SV=1 | 4 | 141 | 8.0E-20 |
| sp|Q9ZSK2|ADF6_ARATH | Actin-depolymerizing factor 6 OS=Arabidopsis thaliana GN=ADF6 PE=1 SV=1 | 4 | 141 | 1.0E-19 |
| sp|P45591|COF2_MOUSE | Cofilin-2 OS=Mus musculus GN=Cfl2 PE=1 SV=1 | 4 | 144 | 1.0E-19 |
| sp|Q5G6V9|COF2_PIG | Cofilin-2 OS=Sus scrofa GN=CFL2 PE=2 SV=4 | 4 | 144 | 1.0E-19 |
| sp|Q9Y281|COF2_HUMAN | Cofilin-2 OS=Homo sapiens GN=CFL2 PE=1 SV=1 | 4 | 144 | 1.0E-19 |
| sp|Q148F1|COF2_BOVIN | Cofilin-2 OS=Bos taurus GN=CFL2 PE=2 SV=1 | 4 | 144 | 1.0E-19 |
| sp|Q43694|ADF2_MAIZE | Actin-depolymerizing factor 2 OS=Zea mays GN=ADF2 PE=2 SV=1 | 2 | 143 | 1.0E-19 |
| sp|Q84TB6|ADF3_ORYSJ | Actin-depolymerizing factor 3 OS=Oryza sativa subsp. japonica GN=ADF3 PE=1 SV=1 | 2 | 138 | 1.0E-19 |
| sp|Q84TB3|ADF4_ORYSJ | Actin-depolymerizing factor 4 OS=Oryza sativa subsp. japonica GN=ADF4 PE=2 SV=1 | 2 | 138 | 2.0E-19 |
| sp|Q41764|ADF3_MAIZE | Actin-depolymerizing factor 3 OS=Zea mays GN=ADF3 PE=1 SV=1 | 2 | 143 | 2.0E-19 |
| sp|Q8H2P8|ADF9_ORYSJ | Actin-depolymerizing factor 9 OS=Oryza sativa subsp. japonica GN=ADF9 PE=2 SV=1 | 2 | 138 | 6.0E-19 |
| sp|O49606|ADF9_ARATH | Actin-depolymerizing factor 9 OS=Arabidopsis thaliana GN=ADF9 PE=2 SV=2 | 2 | 143 | 1.0E-18 |
| sp|P46251|ADF1_MAIZE | Actin-depolymerizing factor 1 OS=Zea mays GN=ADF1 PE=2 SV=1 | 2 | 143 | 2.0E-18 |
| sp|P45594|CADF_DROME | Cofilin/actin-depolymerizing factor homolog OS=Drosophila melanogaster GN=tsr PE=1 SV=1 | 4 | 143 | 2.0E-18 |
| sp|P86293|CADF2_PLAFX | Cofilin/actin-depolymerizing factor homolog 2 OS=Plasmodium falciparum (isolate HB3) PE=2 SV=1 | 4 | 147 | 8.0E-18 |
| sp|Q8ID92|CADF2_PLAF7 | Cofilin/actin-depolymerizing factor homolog 2 OS=Plasmodium falciparum (isolate 3D7) GN=PF13_0326 PE=3 SV=1 | 4 | 147 | 8.0E-18 |
| sp|P18760|COF1_MOUSE | Cofilin-1 OS=Mus musculus GN=Cfl1 PE=1 SV=3 | 4 | 144 | 1.0E-17 |
| sp|Q0DLA3|ADF7_ORYSJ | Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2 | 4 | 138 | 2.0E-17 |
| sp|P45592|COF1_RAT | Cofilin-1 OS=Rattus norvegicus GN=Cfl1 PE=1 SV=3 | 4 | 144 | 3.0E-17 |
| sp|P23528|COF1_HUMAN | Cofilin-1 OS=Homo sapiens GN=CFL1 PE=1 SV=3 | 4 | 144 | 3.0E-17 |
| sp|Q5XHH8|COF2_XENLA | Cofilin-2 OS=Xenopus laevis GN=cfl2 PE=2 SV=1 | 4 | 144 | 4.0E-17 |
| sp|Q5U4Y2|COF2_XENTR | Cofilin-2 OS=Xenopus tropicalis GN=cfl2 PE=2 SV=1 | 4 | 144 | 4.0E-17 |
| sp|Q6B7M7|COF1_SHEEP | Cofilin-1 OS=Ovis aries GN=CFL1 PE=2 SV=3 | 4 | 144 | 6.0E-17 |
| sp|P10668|COF1_PIG | Cofilin-1 OS=Sus scrofa GN=CFL1 PE=1 SV=3 | 4 | 144 | 6.0E-17 |
| sp|Q4R5C0|COF1_MACFA | Cofilin-1 OS=Macaca fascicularis GN=CFL1 PE=2 SV=3 | 4 | 144 | 6.0E-17 |
| sp|Q5E9F7|COF1_BOVIN | Cofilin-1 OS=Bos taurus GN=CFL1 PE=2 SV=3 | 4 | 144 | 6.0E-17 |
| sp|P30174|ADF_BRANA | Actin-depolymerizing factor (Fragment) OS=Brassica napus PE=2 SV=1 | 74 | 143 | 3.0E-16 |
| sp|Q10P87|ADF5_ORYSJ | Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica GN=ADF5 PE=2 SV=1 | 1 | 143 | 4.0E-16 |
| sp|Q54R65|COF4_DICDI | Cofilin-4 OS=Dictyostelium discoideum GN=cofE PE=3 SV=1 | 3 | 138 | 9.0E-16 |
| sp|Q9LZT3|ADF11_ARATH | Putative actin-depolymerizing factor 11 OS=Arabidopsis thaliana GN=ADF11 PE=3 SV=1 | 8 | 148 | 1.0E-15 |
| sp|Q337A5|ADF10_ORYSJ | Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica GN=ADF10 PE=2 SV=1 | 2 | 141 | 1.0E-15 |
| sp|Q7M0E3|DEST_RAT | Destrin OS=Rattus norvegicus GN=Dstn PE=1 SV=3 | 4 | 143 | 1.0E-15 |
| sp|P45593|COF1B_XENLA | Cofilin-1-B OS=Xenopus laevis GN=cfl1-b PE=1 SV=3 | 4 | 138 | 2.0E-15 |
| sp|Q8SAG3|ADF_VITVI | Actin-depolymerizing factor OS=Vitis vinifera PE=2 SV=1 | 74 | 141 | 3.0E-15 |
| sp|Q9R0P5|DEST_MOUSE | Destrin OS=Mus musculus GN=Dstn PE=1 SV=3 | 4 | 143 | 3.0E-15 |
| sp|P18359|DEST_CHICK | Destrin OS=Gallus gallus GN=DSTN PE=1 SV=3 | 4 | 143 | 8.0E-15 |
| sp|P60982|DEST_PIG | Destrin OS=Sus scrofa GN=DSTN PE=1 SV=3 | 4 | 143 | 1.0E-14 |
| sp|P60981|DEST_HUMAN | Destrin OS=Homo sapiens GN=DSTN PE=1 SV=3 | 4 | 143 | 1.0E-14 |
| sp|Q5E9D5|DEST_BOVIN | Destrin OS=Bos taurus GN=DSTN PE=2 SV=3 | 4 | 143 | 1.0E-14 |
| sp|P45695|COF1A_XENLA | Cofilin-1-A OS=Xenopus laevis GN=cfl1-a PE=1 SV=3 | 4 | 138 | 5.0E-14 |
| sp|Q6NX11|COF1_XENTR | Cofilin-1 OS=Xenopus tropicalis GN=cfl1 PE=2 SV=3 | 4 | 138 | 6.0E-14 |
| sp|Q0D744|ADF8_ORYSJ | Putative actin-depolymerizing factor 8 OS=Oryza sativa subsp. japonica GN=ADF8 PE=3 SV=2 | 2 | 141 | 1.0E-13 |
| sp|Q07749|ADF2_CAEEL | Actin-depolymerizing factor 2, isoform c OS=Caenorhabditis elegans GN=unc-60 PE=1 SV=1 | 4 | 143 | 3.0E-13 |
| sp|Q07750|ADF1_CAEEL | Actin-depolymerizing factor 1, isoforms a/b OS=Caenorhabditis elegans GN=unc-60 PE=1 SV=2 | 4 | 144 | 7.0E-12 |
| sp|Q556H5|COF3_DICDI | Cofilin-3 OS=Dictyostelium discoideum GN=cofD-1 PE=3 SV=1 | 6 | 152 | 1.0E-08 |
| sp|Q12792|TWF1_HUMAN | Twinfilin-1 OS=Homo sapiens GN=TWF1 PE=1 SV=3 | 26 | 125 | 1.0E-06 |
| sp|Q5R7N2|TWF1_PONAB | Twinfilin-1 OS=Pongo abelii GN=TWF1 PE=2 SV=1 | 26 | 125 | 2.0E-06 |
| sp|Q5RJR2|TWF1_RAT | Twinfilin-1 OS=Rattus norvegicus GN=Twf1 PE=1 SV=1 | 26 | 125 | 3.0E-06 |
| sp|Q91YR1|TWF1_MOUSE | Twinfilin-1 OS=Mus musculus GN=Twf1 PE=1 SV=2 | 26 | 125 | 3.0E-06 |
| sp|O94399|TWF1_SCHPO | Twinfilin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=twf1 PE=1 SV=1 | 33 | 149 | 5.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003779 | actin binding | Yes |
| GO:0005515 | protein binding | No |
| GO:0008092 | cytoskeletal protein binding | No |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 58 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|3307 MSQSGASVSQECITAYNDLKLSKKLKYIIYKLSDDNKQIVVEEASDDKDWEKFRQKLINATSKSKSGTVGKGPRY AVYDFEYSLASGDGVRNKLAFIAWSPDDAGVQPKMIYASSKEALKRALTGIAVELQANDPDDIEHESVLKTVSKG LAG* |
| Coding | >OphauB2|3307 ATGTCTCAGTCAGGAGCGAGCGTTTCTCAAGAGTGCATAACCGCCTACAATGATTTGAAGCTGTCCAAGAAACTC AAATACATCATTTATAAGCTGTCGGACGACAACAAGCAGATTGTGGTTGAGGAAGCATCCGATGACAAGGACTGG GAGAAGTTCCGCCAGAAGCTCATCAACGCCACGTCCAAGAGCAAGTCGGGCACCGTCGGCAAGGGTCCCCGCTAT GCTGTTTACGACTTTGAGTACAGCCTAGCGTCTGGAGACGGTGTGCGAAACAAGCTCGCCTTTATCGCTTGGTCT CCTGATGATGCTGGGGTTCAGCCCAAGATGATTTACGCTTCTTCCAAAGAAGCCTTGAAACGGGCCTTGACTGGT ATCGCGGTGGAACTGCAGGCCAACGATCCAGATGATATCGAGCACGAATCCGTCCTCAAGACCGTCAGCAAGGGC CTCGCTGGCTAG |
| Transcript | >OphauB2|3307 ATGTCTCAGTCAGGAGCGAGCGTTTCTCAAGAGTGCATAACCGCCTACAATGATTTGAAGCTGTCCAAGAAACTC AAATACATCATTTATAAGCTGTCGGACGACAACAAGCAGATTGTGGTTGAGGAAGCATCCGATGACAAGGACTGG GAGAAGTTCCGCCAGAAGCTCATCAACGCCACGTCCAAGAGCAAGTCGGGCACCGTCGGCAAGGGTCCCCGCTAT GCTGTTTACGACTTTGAGTACAGCCTAGCGTCTGGAGACGGTGTGCGAAACAAGCTCGCCTTTATCGCTTGGTCT CCTGATGATGCTGGGGTTCAGCCCAAGATGATTTACGCTTCTTCCAAAGAAGCCTTGAAACGGGCCTTGACTGGT ATCGCGGTGGAACTGCAGGCCAACGATCCAGATGATATCGAGCACGAATCCGTCCTCAAGACCGTCAGCAAGGGC CTCGCTGGCTAG |
| Gene | >OphauB2|3307 ATGGTGAGAAGCTCTCCAATAGAAAGTCGTGAACGACTGCGATGATACTGACTTTACGATGTAGTCTCAGTCAGG GTTAGTTGTCCTGTTGACTTGTTCCATCCTCGGATGCGCCGTTGCTTGAATACTGGCTTCGCAGCCAGGCTCTCC TGGCACAGGCGTATTTTCTCTGCCTCATTTCGGGCCCCGACAGACCGAATCGGCACTGATTATCTCGTCTGATTT TTAGAGCGAGCGTTTCTCAAGAGTGCATAACCGCCTACAATGATTTGAAGCTGTCCAAGAAACTCAAATACATCA TTTATAAGCTGTCGGACGACAACAAGCAGATTGTGGTTGAGGAAGCATCCGATGACAAGGACTGGGAGAAGTTCC GCCAGAAGCTCATCAACGCCACGTCCAAGAGCAAGTCGGTTCGTCATTGACCTGCTACGTAACATTGCCACCGCA GTATCTGATTGGAAGCAGGGCACCGTCGGCAAGGGTCCCCGCTATGCTGTTTACGACTTTGAGTACAGCCTAGCG TCTGGAGACGGTGTGCGGTGTGTAATGACTTGGTATTTCGTCTTGGTTTCTTTCTGTACTTACTGACCGAATATA GAAACAAGCTCGCCTTTATCGCTTGGTCTCCTGATGATGCTGGGGTTCAGGTAACAGAACAGCGTCTTGAACTCA ACCTCATTTCTCACGCTAACCAAATGCCCACCTCGCAGCCCAAGATGATTTACGCTTCTTCCAAAGAAGCCTTGA AACGGGCCTTGACTGGTATCGCGGTGGAACTGCAGGCCAACGATCCAGATGATATCGAGCACGAATCCGTCCTCA AGACCGTCAGCAAGGGCCTCGCTGGCTAG |