© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauB2|3286 |
| Gene name | |
| Location | Contig_21:130013..130530 |
| Strand | - |
| Gene length (bp) | 517 |
| Transcript length (bp) | 459 |
| Coding sequence length (bp) | 459 |
| Protein length (aa) | 153 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00076 | RRM_1 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 1.5E-17 | 11 | 84 |
| PF16367 | RRM_7 | RNA recognition motif | 3.0E-07 | 10 | 86 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q5R723|PPIE_PONAB | Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii GN=PPIE PE=2 SV=1 | 8 | 117 | 1.0E-26 |
| sp|Q9QZH3|PPIE_MOUSE | Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus GN=Ppie PE=1 SV=2 | 8 | 117 | 1.0E-26 |
| sp|A4FV72|PPIE_BOVIN | Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus GN=PPIE PE=2 SV=1 | 8 | 117 | 1.0E-26 |
| sp|Q9UNP9|PPIE_HUMAN | Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens GN=PPIE PE=1 SV=1 | 8 | 117 | 1.0E-26 |
| sp|Q9V3G3|PPIE_DROME | Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster GN=cyp33 PE=1 SV=1 | 8 | 116 | 2.0E-26 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q5R723|PPIE_PONAB | Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii GN=PPIE PE=2 SV=1 | 8 | 117 | 1.0E-26 |
| sp|Q9QZH3|PPIE_MOUSE | Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus GN=Ppie PE=1 SV=2 | 8 | 117 | 1.0E-26 |
| sp|A4FV72|PPIE_BOVIN | Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus GN=PPIE PE=2 SV=1 | 8 | 117 | 1.0E-26 |
| sp|Q9UNP9|PPIE_HUMAN | Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens GN=PPIE PE=1 SV=1 | 8 | 117 | 1.0E-26 |
| sp|Q9V3G3|PPIE_DROME | Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster GN=cyp33 PE=1 SV=1 | 8 | 116 | 2.0E-26 |
| sp|P0C1I2|PPIE_RHIO9 | Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=cyp10 PE=3 SV=1 | 8 | 130 | 4.0E-25 |
| sp|Q4G338|PPIE_HAECO | Peptidyl-prolyl cis-trans isomerase E OS=Haemonchus contortus PE=1 SV=1 | 8 | 127 | 2.0E-24 |
| sp|Q26548|PPIE_SCHMA | Peptidyl-prolyl cis-trans isomerase E OS=Schistosoma mansoni PE=1 SV=2 | 49 | 137 | 2.0E-17 |
| sp|O94359|YHOC_SCHPO | Uncharacterized RNA-binding protein C428.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC428.12c PE=3 SV=2 | 6 | 96 | 6.0E-17 |
| sp|Q9SD61|C3H42_ARATH | Zinc finger CCCH domain-containing protein 42 OS=Arabidopsis thaliana GN=At3g47120 PE=2 SV=1 | 9 | 96 | 4.0E-10 |
| sp|Q6DJI9|ZCRB1_XENLA | Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Xenopus laevis GN=zcrb1 PE=2 SV=1 | 8 | 101 | 8.0E-10 |
| sp|Q09442|SF3B4_CAEEL | Splicing factor 3B subunit 4 OS=Caenorhabditis elegans GN=sap-49 PE=1 SV=2 | 9 | 93 | 3.0E-09 |
| sp|Q15427|SF3B4_HUMAN | Splicing factor 3B subunit 4 OS=Homo sapiens GN=SF3B4 PE=1 SV=1 | 9 | 88 | 4.0E-09 |
| sp|Q6AYL5|SF3B4_RAT | Splicing factor 3B subunit 4 OS=Rattus norvegicus GN=Sf3b4 PE=2 SV=1 | 9 | 88 | 4.0E-09 |
| sp|Q8QZY9|SF3B4_MOUSE | Splicing factor 3B subunit 4 OS=Mus musculus GN=Sf3b4 PE=1 SV=1 | 9 | 88 | 4.0E-09 |
| sp|F4I3B3|RB47A_ARATH | Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana GN=RBP47A PE=2 SV=1 | 1 | 93 | 5.0E-09 |
| sp|Q10B98|C3H25_ORYSJ | Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa subsp. japonica GN=Os03g0826400 PE=2 SV=1 | 9 | 85 | 5.0E-09 |
| sp|Q9Y388|RBMX2_HUMAN | RNA-binding motif protein, X-linked 2 OS=Homo sapiens GN=RBMX2 PE=1 SV=2 | 9 | 96 | 7.0E-09 |
| sp|P10979|GRPA_MAIZE | Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1 | 11 | 90 | 8.0E-09 |
| sp|Q8R0F5|RBMX2_MOUSE | RNA-binding motif protein, X-linked 2 OS=Mus musculus GN=Rbmx2 PE=1 SV=1 | 11 | 85 | 8.0E-09 |
| sp|Q499V6|ZCRB1_RAT | Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Rattus norvegicus GN=Zcrb1 PE=2 SV=1 | 8 | 88 | 9.0E-09 |
| sp|Q9CZ96|ZCRB1_MOUSE | Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Mus musculus GN=Zcrb1 PE=1 SV=1 | 8 | 88 | 9.0E-09 |
| sp|Q9WX37|RBPE_NOSS1 | Putative RNA-binding protein RbpE OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=rbpE PE=3 SV=3 | 10 | 107 | 1.0E-08 |
| sp|B0BN49|RBMX2_RAT | RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus GN=Rbmx2 PE=2 SV=1 | 9 | 85 | 2.0E-08 |
| sp|Q99070|GRP2_SORBI | Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1 | 11 | 90 | 2.0E-08 |
| sp|Q9CAE4|U1131_ARATH | U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Arabidopsis thaliana GN=SNRNP31 PE=2 SV=1 | 8 | 120 | 3.0E-08 |
| sp|Q10422|YDC1_SCHPO | Uncharacterized RNA-binding protein C25G10.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC25G10.01 PE=1 SV=1 | 11 | 89 | 3.0E-08 |
| sp|Q8C5L7|RBM34_MOUSE | RNA-binding protein 34 OS=Mus musculus GN=Rbm34 PE=1 SV=1 | 4 | 85 | 3.0E-08 |
| sp|Q56JZ7|ZCRB1_BOVIN | Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Bos taurus GN=ZCRB1 PE=2 SV=1 | 8 | 88 | 3.0E-08 |
| sp|Q5M9F1|RBM34_RAT | RNA-binding protein 34 OS=Rattus norvegicus GN=Rbm34 PE=1 SV=1 | 4 | 85 | 3.0E-08 |
| sp|Q8TBF4|ZCRB1_HUMAN | Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Homo sapiens GN=ZCRB1 PE=1 SV=2 | 8 | 88 | 4.0E-08 |
| sp|O14102|SAP49_SCHPO | Spliceosome-associated protein 49 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sap49 PE=3 SV=2 | 9 | 88 | 4.0E-08 |
| sp|Q44556|RBPD_NOSS1 | Putative RNA-binding protein RbpD OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=rbpD PE=3 SV=3 | 10 | 90 | 4.0E-08 |
| sp|Q05966|GRP10_BRANA | Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1 | 11 | 90 | 5.0E-08 |
| sp|Q57014|RBPA_SYNY3 | Putative RNA-binding protein RbpA OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=rbpA PE=3 SV=3 | 10 | 90 | 5.0E-08 |
| sp|Q9WX39|RBPF_NOSS1 | Putative RNA-binding protein RbpF OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=rbpF PE=3 SV=3 | 10 | 90 | 7.0E-08 |
| sp|Q8RWN5|RZ1C_ARATH | Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana GN=RZ1C PE=1 SV=1 | 4 | 99 | 7.0E-08 |
| sp|P40565|IST3_YEAST | U2 snRNP component IST3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IST3 PE=1 SV=1 | 9 | 85 | 7.0E-08 |
| sp|Q96E39|RMXL1_HUMAN | RNA binding motif protein, X-linked-like-1 OS=Homo sapiens GN=RBMXL1 PE=1 SV=1 | 1 | 91 | 1.0E-07 |
| sp|Q9LIN3|RZ1A_ARATH | Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana GN=RZ1A PE=1 SV=1 | 11 | 90 | 2.0E-07 |
| sp|Q9SAB3|RB45B_ARATH | Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana GN=RBP45B PE=1 SV=1 | 9 | 97 | 2.0E-07 |
| sp|Q9WV02|RBMX_MOUSE | RNA-binding motif protein, X chromosome OS=Mus musculus GN=Rbmx PE=1 SV=1 | 1 | 91 | 2.0E-07 |
| sp|Q4V898|RBMX_RAT | RNA-binding motif protein, X chromosome OS=Rattus norvegicus GN=Rbmx PE=1 SV=1 | 1 | 91 | 2.0E-07 |
| sp|Q0WW84|RB47B_ARATH | Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana GN=RBP47B PE=2 SV=1 | 2 | 102 | 2.0E-07 |
| sp|Q9SVM8|RBG2_ARATH | Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana GN=RBG2 PE=1 SV=1 | 1 | 89 | 3.0E-07 |
| sp|A5A6M3|RBMX_PANTR | RNA-binding motif protein, X chromosome OS=Pan troglodytes GN=RBMX PE=2 SV=1 | 1 | 91 | 3.0E-07 |
| sp|P38159|RBMX_HUMAN | RNA-binding motif protein, X chromosome OS=Homo sapiens GN=RBMX PE=1 SV=3 | 1 | 91 | 3.0E-07 |
| sp|Q4R7F0|RBMX_MACFA | RNA-binding motif protein, X chromosome OS=Macaca fascicularis GN=RBMX PE=2 SV=1 | 1 | 91 | 3.0E-07 |
| sp|Q5SP50|ZCRB1_DANRE | Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Danio rerio GN=zcrb1 PE=2 SV=1 | 8 | 88 | 3.0E-07 |
| sp|Q29RT0|RBMX_BOVIN | RNA-binding motif protein, X chromosome OS=Bos taurus GN=RBMX PE=2 SV=1 | 11 | 91 | 3.0E-07 |
| sp|Q91VM5|RMXL1_MOUSE | RNA binding motif protein, X-linked-like-1 OS=Mus musculus GN=Rbmxl1 PE=2 SV=1 | 1 | 91 | 4.0E-07 |
| sp|O75526|RMXL2_HUMAN | RNA-binding motif protein, X-linked-like-2 OS=Homo sapiens GN=RBMXL2 PE=1 SV=3 | 1 | 91 | 4.0E-07 |
| sp|Q9LIS2|RBG4_ARATH | Glycine-rich RNA-binding protein 4, mitochondrial OS=Arabidopsis thaliana GN=RBG4 PE=2 SV=1 | 1 | 94 | 5.0E-07 |
| sp|Q9LEB3|RBP47_NICPL | Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia GN=RBP47 PE=1 SV=1 | 2 | 91 | 7.0E-07 |
| sp|Q03878|GRP1_DAUCA | Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1 | 11 | 90 | 8.0E-07 |
| sp|Q7ZWA3|RBMX_DANRE | RNA-binding motif protein, X chromosome OS=Danio rerio GN=rbmx PE=2 SV=1 | 1 | 92 | 9.0E-07 |
| sp|Q9XFR5|SR30_ARATH | Serine/arginine-rich splicing factor SR30 OS=Arabidopsis thaliana GN=SR30 PE=1 SV=1 | 4 | 88 | 9.0E-07 |
| sp|P21187|PABP_DROME | Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp PE=1 SV=3 | 11 | 105 | 1.0E-06 |
| sp|D4AE41|RMXL1_RAT | RNA binding motif protein, X-linked-like-1 OS=Rattus norvegicus GN=Rbmxl1 PE=3 SV=1 | 1 | 91 | 1.0E-06 |
| sp|Q9SX80|R47CP_ARATH | Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana GN=RBP47C' PE=2 SV=1 | 9 | 91 | 1.0E-06 |
| sp|Q6PG31|RNPS1_DANRE | RNA-binding protein with serine-rich domain 1 OS=Danio rerio GN=rnps1 PE=2 SV=1 | 11 | 87 | 1.0E-06 |
| sp|Q6IRQ4|RBMX_XENLA | RNA-binding motif protein, X chromosome OS=Xenopus laevis GN=rbmx PE=2 SV=1 | 1 | 91 | 1.0E-06 |
| sp|O22703|RZ1B_ARATH | Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana GN=RZ1B PE=2 SV=1 | 9 | 90 | 1.0E-06 |
| sp|P49311|GRP2_SINAL | Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1 | 11 | 89 | 1.0E-06 |
| sp|P84586|RMXRL_RAT | RNA-binding motif protein, X chromosome retrogene-like OS=Rattus norvegicus GN=Rbmxrtl PE=1 SV=1 | 1 | 91 | 1.0E-06 |
| sp|Q9SX79|RB47C_ARATH | Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana GN=RBP47C PE=2 SV=1 | 9 | 91 | 1.0E-06 |
| sp|Q28IQ9|CIRBP_XENTR | Cold-inducible RNA-binding protein OS=Xenopus tropicalis GN=cirbp PE=2 SV=1 | 11 | 88 | 1.0E-06 |
| sp|Q9PTX2|CIRBP_LITCT | Cold-inducible RNA-binding protein OS=Lithobates catesbeiana GN=cirbp PE=2 SV=1 | 11 | 88 | 2.0E-06 |
| sp|A5DM21|PABP_PICGU | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PAB1 PE=3 SV=2 | 9 | 106 | 2.0E-06 |
| sp|Q9NW13|RBM28_HUMAN | RNA-binding protein 28 OS=Homo sapiens GN=RBM28 PE=1 SV=3 | 11 | 114 | 2.0E-06 |
| sp|Q4R813|RMXL2_MACFA | RNA-binding motif protein, X-linked-like-2 OS=Macaca fascicularis GN=RBMXL2 PE=2 SV=1 | 1 | 91 | 2.0E-06 |
| sp|O94290|IST3_SCHPO | U2 snRNP component ist3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cwf29 PE=1 SV=1 | 9 | 96 | 2.0E-06 |
| sp|Q8T6B9|PUF68_DROME | Poly(U)-binding-splicing factor half pint OS=Drosophila melanogaster GN=pUf68 PE=1 SV=2 | 11 | 85 | 2.0E-06 |
| sp|P27476|NSR1_YEAST | Nuclear localization sequence-binding protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NSR1 PE=1 SV=1 | 10 | 90 | 2.0E-06 |
| sp|Q44554|RBPB_NOSS1 | Putative RNA-binding protein RbpB OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=rbpB PE=3 SV=3 | 10 | 90 | 2.0E-06 |
| sp|Q8WXF0|SRS12_HUMAN | Serine/arginine-rich splicing factor 12 OS=Homo sapiens GN=SRSF12 PE=2 SV=1 | 9 | 101 | 2.0E-06 |
| sp|O13620|MRD1_SCHPO | Multiple RNA-binding domain-containing protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mrd1 PE=3 SV=1 | 11 | 89 | 3.0E-06 |
| sp|Q3KPW1|RNP1B_XENLA | RNA-binding protein with serine-rich domain 1-B OS=Xenopus laevis GN=rnps1-b PE=2 SV=1 | 11 | 91 | 3.0E-06 |
| sp|Q5BGA9|MRD1_EMENI | Multiple RNA-binding domain-containing protein 1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=mrd1 PE=3 SV=1 | 6 | 101 | 3.0E-06 |
| sp|Q28E41|RNPS1_XENTR | RNA-binding protein with serine-rich domain 1 OS=Xenopus tropicalis GN=rnps1 PE=2 SV=1 | 11 | 91 | 3.0E-06 |
| sp|Q5XG24|RNP1A_XENLA | RNA-binding protein with serine-rich domain 1-A OS=Xenopus laevis GN=rnps1-a PE=2 SV=1 | 11 | 91 | 3.0E-06 |
| sp|Q03251|RBG8_ARATH | Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=RBG8 PE=1 SV=1 | 11 | 89 | 3.0E-06 |
| sp|P20965|PABPA_XENLA | Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-a PE=1 SV=3 | 9 | 85 | 3.0E-06 |
| sp|G3V6S8|SRSF6_RAT | Serine/arginine-rich splicing factor 6 OS=Rattus norvegicus GN=Srsf6 PE=1 SV=1 | 11 | 93 | 3.0E-06 |
| sp|Q3TWW8|SRSF6_MOUSE | Serine/arginine-rich splicing factor 6 OS=Mus musculus GN=Srsf6 PE=1 SV=1 | 11 | 93 | 3.0E-06 |
| sp|Q9R0U0|SRS10_MOUSE | Serine/arginine-rich splicing factor 10 OS=Mus musculus GN=Srsf10 PE=1 SV=2 | 9 | 101 | 3.0E-06 |
| sp|O75494|SRS10_HUMAN | Serine/arginine-rich splicing factor 10 OS=Homo sapiens GN=SRSF10 PE=1 SV=1 | 9 | 101 | 3.0E-06 |
| sp|P62997|TRA2B_RAT | Transformer-2 protein homolog beta OS=Rattus norvegicus GN=Tra2b PE=1 SV=1 | 9 | 110 | 3.0E-06 |
| sp|P62996|TRA2B_MOUSE | Transformer-2 protein homolog beta OS=Mus musculus GN=Tra2b PE=1 SV=1 | 9 | 110 | 3.0E-06 |
| sp|P62995|TRA2B_HUMAN | Transformer-2 protein homolog beta OS=Homo sapiens GN=TRA2B PE=1 SV=1 | 9 | 110 | 3.0E-06 |
| sp|Q3ZBT6|TRA2B_BOVIN | Transformer-2 protein homolog beta OS=Bos taurus GN=TRA2B PE=2 SV=1 | 9 | 110 | 3.0E-06 |
| sp|Q13247|SRSF6_HUMAN | Serine/arginine-rich splicing factor 6 OS=Homo sapiens GN=SRSF6 PE=1 SV=2 | 11 | 93 | 4.0E-06 |
| sp|Q01085|TIAR_HUMAN | Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1 | 11 | 91 | 4.0E-06 |
| sp|P70318|TIAR_MOUSE | Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=1 SV=1 | 11 | 91 | 5.0E-06 |
| sp|O93235|CIRBA_XENLA | Cold-inducible RNA-binding protein A OS=Xenopus laevis GN=cirbp-a PE=1 SV=2 | 11 | 88 | 5.0E-06 |
| sp|Q39061|CP33_ARATH | RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana GN=CP33 PE=2 SV=1 | 4 | 92 | 7.0E-06 |
| sp|Q15415|RBY1F_HUMAN | RNA-binding motif protein, Y chromosome, family 1 member F/J OS=Homo sapiens GN=RBMY1F PE=1 SV=2 | 11 | 91 | 7.0E-06 |
| sp|P49310|GRP1_SINAL | Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1 | 11 | 89 | 7.0E-06 |
| sp|Q09442|SF3B4_CAEEL | Splicing factor 3B subunit 4 OS=Caenorhabditis elegans GN=sap-49 PE=1 SV=2 | 9 | 107 | 8.0E-06 |
| sp|O22315|SR34_ARATH | Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana GN=SR34 PE=1 SV=1 | 4 | 88 | 9.0E-06 |
| sp|Q8CGC6|RBM28_MOUSE | RNA-binding protein 28 OS=Mus musculus GN=Rbm28 PE=1 SV=4 | 11 | 85 | 1.0E-05 |
| sp|Q5RF83|CIRBP_PONAB | Cold-inducible RNA-binding protein OS=Pongo abelii GN=CIRBP PE=2 SV=1 | 11 | 88 | 1.0E-05 |
| sp|Q14011|CIRBP_HUMAN | Cold-inducible RNA-binding protein OS=Homo sapiens GN=CIRBP PE=1 SV=1 | 11 | 88 | 1.0E-05 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003723 | RNA binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0003676 | nucleic acid binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|3286 MADASRWKATVFVGGLSQMVTNSNIYDAFIPFGEIVEVQMPKPDSQNSSDAHRGFAYVQFEDAEDAVEAIDNMNQ SELFGRTLKVSAAKPPKKADEGLSSKRAVWEQEGWLAEHAGKQGNEDPLEQSKTDGEKVPDPMQGLEELDVAGPR PA* |
| Coding | >OphauB2|3286 ATGGCGGATGCAAGCCGTTGGAAAGCTACCGTCTTCGTTGGCGGCCTATCTCAGATGGTCACGAACAGCAACATC TACGACGCATTTATCCCCTTTGGCGAAATTGTCGAAGTACAAATGCCGAAACCCGACTCACAAAACTCATCTGAC GCCCATAGAGGCTTTGCCTATGTGCAATTTGAGGATGCAGAGGACGCCGTTGAAGCCATCGACAACATGAACCAG TCAGAACTTTTTGGGAGAACACTCAAAGTTTCAGCTGCAAAGCCGCCGAAAAAGGCAGATGAAGGCCTGAGCAGC AAGAGAGCTGTATGGGAGCAGGAAGGCTGGTTGGCAGAACATGCAGGCAAGCAAGGAAATGAAGATCCATTGGAA CAAAGTAAAACAGATGGAGAAAAGGTTCCTGATCCTATGCAAGGACTCGAGGAGTTGGATGTCGCAGGGCCACGA CCAGCATGA |
| Transcript | >OphauB2|3286 ATGGCGGATGCAAGCCGTTGGAAAGCTACCGTCTTCGTTGGCGGCCTATCTCAGATGGTCACGAACAGCAACATC TACGACGCATTTATCCCCTTTGGCGAAATTGTCGAAGTACAAATGCCGAAACCCGACTCACAAAACTCATCTGAC GCCCATAGAGGCTTTGCCTATGTGCAATTTGAGGATGCAGAGGACGCCGTTGAAGCCATCGACAACATGAACCAG TCAGAACTTTTTGGGAGAACACTCAAAGTTTCAGCTGCAAAGCCGCCGAAAAAGGCAGATGAAGGCCTGAGCAGC AAGAGAGCTGTATGGGAGCAGGAAGGCTGGTTGGCAGAACATGCAGGCAAGCAAGGAAATGAAGATCCATTGGAA CAAAGTAAAACAGATGGAGAAAAGGTTCCTGATCCTATGCAAGGACTCGAGGAGTTGGATGTCGCAGGGCCACGA CCAGCATGA |
| Gene | >OphauB2|3286 ATGGCGGATGCAAGCCGTTGGAAAGCTACCGTCTTCGTTGGCGGCCTATCTCAGATGGTCACGAACAGCAACATC TACGACGCATTTATCCCCTTTGGCGAAATTGTCGAAGTACAAATGCCGAAACCCGACTCACAAAACTCATCTGAC GCCCATAGAGGCTTTGCCTATGTGCAATTTGAGGATGCAGAGGACGCCGTTGAAGCCATCGACAACATGAACCAG TCAGAACTTTTTGGGAGAACACTCAAAGTTTCAGCTGCAAAGCCGCCGAAAAAGGCAGATGAAGGCCTGAGCAGC AAGAGAGCTGTATGGGAGCAGGTGAGCTTGACACCATAGCATCATGACGACAGGCCCAAAACTGACCCCATCTTC TCAGGAAGGCTGGTTGGCAGAACATGCAGGCAAGCAAGGAAATGAAGATCCATTGGAACAAAGTAAAACAGATGG AGAAAAGGTTCCTGATCCTATGCAAGGACTCGAGGAGTTGGATGTCGCAGGGCCACGACCAGCATGA |