Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|3285
Gene name
LocationContig_21:129326..129792
Strand+
Gene length (bp)466
Transcript length (bp)288
Coding sequence length (bp)288
Protein length (aa) 96

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06522 B12D NADH-ubiquinone reductase complex 1 MLRQ subunit 1.0E-04 50 86

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 52 71 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|3285
MVRPTARMMFRSSTQMTFRTSARMMRPVPKEDQAGHTISQRLRKLKQIPAELIPLAVVVGFAIFAASYSTIRKFM
VDKNLRLSRQGSSGRSEEHH*
Coding >OphauB2|3285
ATGGTCCGGCCTACGGCTCGCATGATGTTTCGTTCATCGACGCAGATGACGTTCCGTACGTCGGCCCGGATGATG
CGACCGGTTCCTAAAGAAGATCAAGCTGGGCATACCATTTCGCAGCGACTGCGGAAGCTCAAACAGATCCCGGCC
GAACTTATCCCGCTAGCTGTTGTTGTCGGATTTGCCATCTTCGCGGCAAGCTACTCAACCATAAGGAAGTTTATG
GTGGACAAGAATCTGCGCCTGTCGAGACAGGGTTCTTCTGGACGATCTGAGGAACACCACTAA
Transcript >OphauB2|3285
ATGGTCCGGCCTACGGCTCGCATGATGTTTCGTTCATCGACGCAGATGACGTTCCGTACGTCGGCCCGGATGATG
CGACCGGTTCCTAAAGAAGATCAAGCTGGGCATACCATTTCGCAGCGACTGCGGAAGCTCAAACAGATCCCGGCC
GAACTTATCCCGCTAGCTGTTGTTGTCGGATTTGCCATCTTCGCGGCAAGCTACTCAACCATAAGGAAGTTTATG
GTGGACAAGAATCTGCGCCTGTCGAGACAGGGTTCTTCTGGACGATCTGAGGAACACCACTAA
Gene >OphauB2|3285
ATGGTCCGGCCTACGGCTCGCATGATGTTTCGTTCATCGACGCAGATGACGTTCCGTACGTCGGCCCGGATGATG
CGACCGGTTCCTGTACGTCGGTTATGAGTATTATGCACGCAGGGGAACGCAACTAACTCATTCTGTCAATACAGA
AAGAAGATCAAGCTGGTGCGTCATACCGTCTCTGCCGACCTCACCTGTATGTAGCATCTCTGACGAGCAAACAGG
GCATACCATTTCGCAGCGACTGCGGAAGCTCAAACAGATCCCGGCCGAACTTATCCCGCTAGGTAACACGATCTC
GTTCAAATACCGATCATGAAAAAATCGAGCCTGACTATTAATAGCTGTTGTTGTCGGATTTGCCATCTTCGCGGC
AAGCTACTCAACCATAAGGAAGTTTATGGTGGACAAGAATCTGCGCCTGTCGAGACAGGGTTCTTCTGGACGATC
TGAGGAACACCACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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