Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|3279
Gene name
Location	Contig_21:117849..118528
Strand	+
Gene length (bp)	679
Transcript length (bp)	627
Coding sequence length (bp)	627
Protein length (aa)	209

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05047	L51_S25_CI-B8	Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain	1.1E-13	35	135

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 23	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|3279 MFNVRCGPGAAKLPMNITKIHMDFCASLIGGHQGAKKFWRENLPRLKYHNPQIPMLVNRHDENSKDSALSIFMRT TANPPVTVDAPSSTTVNPSATADASSSTSEDKLFYSSRHNMCPLPSPAPNERIVQIQMKNVHSTEILKRFVDESG AKEIKLTDMDSKEQVYFDELAKQRVMSLEAFKRRKANKAKERAFLRQARKAGGPKEAA*
Coding	>OphauB2\|3279 ATGTTCAACGTTCGATGCGGTCCTGGAGCTGCCAAACTGCCCATGAACATCACCAAGATTCATATGGACTTTTGC GCAAGCCTCATTGGGGGCCACCAAGGCGCCAAGAAATTCTGGCGTGAAAACCTGCCTAGACTCAAATACCACAAC CCACAAATCCCAATGTTGGTAAATCGACACGATGAAAACAGCAAAGACTCTGCTCTCTCAATCTTTATGCGTACC ACAGCCAACCCACCCGTTACTGTCGATGCTCCTTCCAGCACCACGGTCAATCCATCAGCTACCGCCGATGCTTCT TCTAGCACCAGCGAAGATAAACTATTCTACTCCTCCCGGCACAACATGTGCCCGCTGCCATCACCAGCCCCCAAC GAGCGCATAGTCCAAATCCAGATGAAGAATGTTCATTCCACGGAAATACTTAAGCGCTTCGTTGACGAGAGTGGT GCCAAGGAGATCAAGTTGACCGATATGGATAGCAAAGAGCAGGTATACTTTGACGAACTTGCGAAACAGCGCGTA ATGTCTTTGGAGGCTTTCAAGCGGAGAAAGGCAAACAAGGCAAAGGAAAGGGCTTTCCTTCGGCAGGCCAGAAAG GCCGGCGGACCGAAAGAAGCCGCCTAG
Transcript	>OphauB2\|3279 ATGTTCAACGTTCGATGCGGTCCTGGAGCTGCCAAACTGCCCATGAACATCACCAAGATTCATATGGACTTTTGC GCAAGCCTCATTGGGGGCCACCAAGGCGCCAAGAAATTCTGGCGTGAAAACCTGCCTAGACTCAAATACCACAAC CCACAAATCCCAATGTTGGTAAATCGACACGATGAAAACAGCAAAGACTCTGCTCTCTCAATCTTTATGCGTACC ACAGCCAACCCACCCGTTACTGTCGATGCTCCTTCCAGCACCACGGTCAATCCATCAGCTACCGCCGATGCTTCT TCTAGCACCAGCGAAGATAAACTATTCTACTCCTCCCGGCACAACATGTGCCCGCTGCCATCACCAGCCCCCAAC GAGCGCATAGTCCAAATCCAGATGAAGAATGTTCATTCCACGGAAATACTTAAGCGCTTCGTTGACGAGAGTGGT GCCAAGGAGATCAAGTTGACCGATATGGATAGCAAAGAGCAGGTATACTTTGACGAACTTGCGAAACAGCGCGTA ATGTCTTTGGAGGCTTTCAAGCGGAGAAAGGCAAACAAGGCAAAGGAAAGGGCTTTCCTTCGGCAGGCCAGAAAG GCCGGCGGACCGAAAGAAGCCGCCTAG
Gene	>OphauB2\|3279 ATGTTCAACGTTCGATGCGGTCCTGGAGCTGCCAAACTGCCCATGAACATCACCAAGATTCATATGGACTTTTGC GCAAGCCTCATTGGGGGCCACCAAGGCGCCAAGTGCGTCCTTATTTTACATGCCTCTGAAGCCAGCATTGCTCAC CATGACCAGGAAATTCTGGCGTGAAAACCTGCCTAGACTCAAATACCACAACCCACAAATCCCAATGTTGGTAAA TCGACACGATGAAAACAGCAAAGACTCTGCTCTCTCAATCTTTATGCGTACCACAGCCAACCCACCCGTTACTGT CGATGCTCCTTCCAGCACCACGGTCAATCCATCAGCTACCGCCGATGCTTCTTCTAGCACCAGCGAAGATAAACT ATTCTACTCCTCCCGGCACAACATGTGCCCGCTGCCATCACCAGCCCCCAACGAGCGCATAGTCCAAATCCAGAT GAAGAATGTTCATTCCACGGAAATACTTAAGCGCTTCGTTGACGAGAGTGGTGCCAAGGAGATCAAGTTGACCGA TATGGATAGCAAAGAGCAGGTATACTTTGACGAACTTGCGAAACAGCGCGTAATGTCTTTGGAGGCTTTCAAGCG GAGAAAGGCAAACAAGGCAAAGGAAAGGGCTTTCCTTCGGCAGGCCAGAAAGGCCGGCGGACCGAAAGAAGCCGC CTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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