© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|3272 |
| Gene name | |
| Location | Contig_21:106139..106864 |
| Strand | + |
| Gene length (bp) | 725 |
| Transcript length (bp) | 564 |
| Coding sequence length (bp) | 564 |
| Protein length (aa) | 188 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00723 | Glyco_hydro_15 | Glycosyl hydrolases family 15 | 1.4E-23 | 78 | 186 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P14804|AMYG_NEUCR | Glucoamylase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=gla-1 PE=1 SV=3 | 38 | 187 | 1.0E-46 |
| sp|P69328|AMYG_ASPNG | Glucoamylase OS=Aspergillus niger GN=GLAA PE=1 SV=1 | 65 | 187 | 2.0E-40 |
| sp|P69327|AMYG_ASPAW | Glucoamylase OS=Aspergillus awamori GN=GLAA PE=1 SV=1 | 65 | 187 | 2.0E-40 |
| sp|P23176|AMYG_ASPKA | Glucoamylase I OS=Aspergillus kawachii GN=gaI PE=1 SV=1 | 65 | 187 | 7.0E-38 |
| sp|P22832|AMYG_ASPSH | Glucoamylase OS=Aspergillus shirousami GN=glaA PE=3 SV=1 | 65 | 187 | 8.0E-37 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P14804|AMYG_NEUCR | Glucoamylase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=gla-1 PE=1 SV=3 | 38 | 187 | 1.0E-46 |
| sp|P69328|AMYG_ASPNG | Glucoamylase OS=Aspergillus niger GN=GLAA PE=1 SV=1 | 65 | 187 | 2.0E-40 |
| sp|P69327|AMYG_ASPAW | Glucoamylase OS=Aspergillus awamori GN=GLAA PE=1 SV=1 | 65 | 187 | 2.0E-40 |
| sp|P23176|AMYG_ASPKA | Glucoamylase I OS=Aspergillus kawachii GN=gaI PE=1 SV=1 | 65 | 187 | 7.0E-38 |
| sp|P22832|AMYG_ASPSH | Glucoamylase OS=Aspergillus shirousami GN=glaA PE=3 SV=1 | 65 | 187 | 8.0E-37 |
| sp|P36914|AMYG_ASPOR | Glucoamylase OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=glaA PE=2 SV=2 | 64 | 187 | 2.0E-36 |
| sp|D8Q9M3|AMYG_SCHCM | Glucoamylase ARB_02327-1 OS=Schizophyllum commune (strain H4-8 / FGSC 9210) GN=SCHCODRAFT_57589 PE=1 SV=1 | 65 | 187 | 5.0E-35 |
| sp|Q03045|AMYG_AMORE | Glucoamylase P OS=Amorphotheca resinae GN=GAMP PE=1 SV=1 | 64 | 187 | 2.0E-30 |
| sp|O60087|AMYG_SCHPO | Probable glucoamylase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=meu17 PE=2 SV=1 | 65 | 187 | 3.0E-24 |
| sp|P08017|AMYG_SACFI | Glucoamylase GLU1 OS=Saccharomycopsis fibuligera GN=GLU1 PE=1 SV=1 | 65 | 187 | 1.0E-21 |
| sp|P26989|AMYH_SACFI | Glucoamylase GLA1 OS=Saccharomycopsis fibuligera GN=GLA1 PE=3 SV=2 | 65 | 187 | 2.0E-21 |
| sp|P0DN29|AMYG_ARTBC | Glucoamylase ARB_02327-1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02327-1 PE=1 SV=1 | 45 | 187 | 1.0E-17 |
| sp|P42042|AMYG_BLAAD | Glucoamylase OS=Blastobotrys adeninivorans GN=GAA PE=3 SV=1 | 72 | 187 | 3.0E-15 |
| sp|P04065|AMYH_YEASX | Glucoamylase S1 OS=Saccharomyces cerevisiae GN=STA1 PE=3 SV=2 | 64 | 187 | 1.0E-13 |
| sp|P08019|AMYG_YEAST | Glucoamylase, intracellular sporulation-specific OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SGA1 PE=3 SV=2 | 64 | 187 | 1.0E-13 |
| sp|P29760|AMYI_YEASX | Glucoamylase S2 OS=Saccharomyces cerevisiae GN=STA2 PE=3 SV=1 | 64 | 187 | 2.0E-13 |
| sp|I1BYW6|AMYD_RHIO9 | Glucoamylase amyD OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=amyD PE=1 SV=1 | 40 | 187 | 2.0E-12 |
| sp|P07683|AMYG_RHIOR | Glucoamylase 1 OS=Rhizopus oryzae PE=1 SV=2 | 65 | 187 | 8.0E-10 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 35 | 0.5 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|3272 MPLFSPHGPYYKPRPMDSLLYPAASWLNHSSCLAQPVMHFISTVLLFTSVTWQHVVGQAASPLASSVDAFLESEA PVAFNLLLCNIGAQGCHVKGAASGVVVASPSTHDPDYFYTWTRDSGLVFKSLVDRFTHSYDASLQRHIQEYIVSQ AAQQAVSNPSGSLADGAGLGEPKFEANLTAFTGEWGK* |
| Coding | >OphauB2|3272 ATGCCACTCTTCTCGCCACACGGCCCTTATTATAAGCCTCGCCCCATGGACTCGCTGCTCTACCCGGCCGCCTCT TGGCTCAACCATTCGTCTTGTCTAGCCCAGCCCGTCATGCACTTCATCTCGACTGTTCTCCTCTTTACCTCTGTC ACCTGGCAGCACGTCGTGGGCCAGGCAGCCAGCCCACTCGCCTCCAGTGTCGATGCCTTTCTCGAGTCGGAGGCG CCCGTTGCTTTCAACCTGTTGCTTTGCAACATTGGAGCCCAGGGCTGCCATGTAAAGGGCGCTGCCTCTGGAGTC GTTGTTGCGTCTCCCAGCACCCATGATCCAGACTACTTTTACACGTGGACCAGAGACAGCGGTCTCGTCTTCAAG TCGCTCGTTGACCGCTTCACCCACAGCTATGACGCCAGTCTTCAGCGCCACATCCAAGAGTACATTGTCTCTCAG GCGGCACAGCAGGCCGTCTCTAACCCCTCGGGCTCACTGGCCGACGGCGCCGGCCTAGGAGAGCCAAAGTTTGAG GCTAATCTAACTGCCTTTACTGGCGAATGGGGAAAGTAA |
| Transcript | >OphauB2|3272 ATGCCACTCTTCTCGCCACACGGCCCTTATTATAAGCCTCGCCCCATGGACTCGCTGCTCTACCCGGCCGCCTCT TGGCTCAACCATTCGTCTTGTCTAGCCCAGCCCGTCATGCACTTCATCTCGACTGTTCTCCTCTTTACCTCTGTC ACCTGGCAGCACGTCGTGGGCCAGGCAGCCAGCCCACTCGCCTCCAGTGTCGATGCCTTTCTCGAGTCGGAGGCG CCCGTTGCTTTCAACCTGTTGCTTTGCAACATTGGAGCCCAGGGCTGCCATGTAAAGGGCGCTGCCTCTGGAGTC GTTGTTGCGTCTCCCAGCACCCATGATCCAGACTACTTTTACACGTGGACCAGAGACAGCGGTCTCGTCTTCAAG TCGCTCGTTGACCGCTTCACCCACAGCTATGACGCCAGTCTTCAGCGCCACATCCAAGAGTACATTGTCTCTCAG GCGGCACAGCAGGCCGTCTCTAACCCCTCGGGCTCACTGGCCGACGGCGCCGGCCTAGGAGAGCCAAAGTTTGAG GCTAATCTAACTGCCTTTACTGGCGAATGGGGAAAGTAA |
| Gene | >OphauB2|3272 ATGCCACTCTTGTCTGTCCACTCTTGTCCACTTCCTGTCACCCGCTCACACAAATGACACTCACATGCGCCATGT ATCTCGCAGCTCGCCACACGGCCCTTATTATAAGCCTCGCCCCATGGACTCGCTGCTCTACCCGGCCGCCTCTTG GCTCAACCATTCGTCTTGTCTAGCCCAGCCCGTCATGCACTTCATCTCGACTGTTCTCCTCTTTACCTCTGTCAC CTGGCAGCACGTCGTGGGCCAGGCAGCCAGCCCACTCGCCTCCAGTGTCGATGCCTTTCTCGAGTCGGAGGCGCC CGTTGCTTTCAACCTGTTGCTTTGCAACATTGGAGCCCAGGGCTGCCATGTAAAGGGCGCTGCCTCTGGAGTCGT TGTTGCGTCTCCCAGCACCCATGATCCAGACTGTCCGTGACTTTTATTGTCTCCTATCGTCTTGTTTGCTAGATA GATTTGCTATTGTTAAAGAAATTGATGCTTAGCTGGCCTTGACAGACTTTTACACGTGGACCAGAGACAGCGGTC TCGTCTTCAAGTCGCTCGTTGACCGCTTCACCCACAGCTATGACGCCAGTCTTCAGCGCCACATCCAAGAGTACA TTGTCTCTCAGGCGGCACAGCAGGCCGTCTCTAACCCCTCGGGCTCACTGGCCGACGGCGCCGGCCTAGGAGAGC CAAAGTTTGAGGCTAATCTAACTGCCTTTACTGGCGAATGGGGAAAGTAA |