Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|3240
Gene name
LocationContig_21:16561..17857
Strand-
Gene length (bp)1296
Transcript length (bp)1296
Coding sequence length (bp)1296
Protein length (aa) 432

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11790 Glyco_hydro_cc Glycosyl hydrolase catalytic core 7.7E-56 198 427

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q09788|ASL1_SCHPO Alkali-sensitive linkage protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=asl1 PE=1 SV=1 195 429 5.0E-15

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|3240
MYAKSLATMAAVASLSQQSLAFNSHRHLHRQEAKREVAMDMVTVWETVYVTESEQPTQFVADSRPQQTTLTAFTT
MTNMEPMPEQSSPSEAAAPVVPPVEPAQQPPAAPPVEQPPVAPPVEQPPPSSAIQEPPPPPPQTTLSTAVMPAPA
PPAPQVSSPAPPASAVKVQPQSSSKPPTAKPSGSNKTPGGPGFAGKRGLAYNDGSLANTFGSSCQQCGWAYNWAS
SPQGLDPKISFVPMLWGDSPTHTNHWDSDAEKALASGSKAFFSFNEPDIKGQANLSPQQAAASHVKYMNKYAGRA
LIGAPSVSNSNLEGEGLAWLKSFMSACENQQEKCQVDFCNVHWYAPASASNTLFDHLEEAHQACGGKPVWLTEFA
PVGDPAQTSSFLQTVMPKLEQLSYVDAYSYFMVSSGNLMSSATDLSSFGKVYASMA*
Coding >OphauB2|3240
ATGTACGCTAAAAGTCTGGCCACCATGGCCGCTGTGGCTTCGCTCTCTCAGCAGTCGCTGGCCTTCAACTCGCAC
CGCCACCTCCACCGCCAAGAGGCCAAGCGCGAAGTCGCCATGGACATGGTGACGGTTTGGGAAACGGTCTACGTG
ACGGAGTCGGAGCAGCCCACCCAGTTTGTTGCCGACTCCCGCCCCCAGCAGACGACTCTGACGGCTTTCACCACC
ATGACCAACATGGAGCCTATGCCTGAGCAGTCGTCGCCCAGCGAGGCAGCTGCCCCGGTTGTGCCTCCAGTTGAG
CCGGCCCAGCAGCCCCCGGCTGCGCCTCCAGTTGAACAGCCGCCGGTTGCGCCCCCGGTTGAGCAGCCCCCGCCA
AGCTCGGCTATCCAGGAGCCGCCTCCACCTCCCCCCCAGACCACCTTGTCTACAGCAGTTATGCCTGCTCCTGCC
CCTCCTGCGCCACAGGTCAGCAGCCCTGCTCCTCCTGCCTCTGCCGTCAAGGTGCAGCCCCAGAGCTCGTCGAAG
CCTCCTACTGCCAAGCCCTCGGGCAGCAACAAGACGCCTGGCGGTCCCGGCTTTGCTGGAAAGCGCGGTCTCGCT
TACAATGACGGCTCTCTGGCCAACACGTTTGGCAGCTCGTGCCAGCAATGCGGCTGGGCTTACAACTGGGCTTCA
TCGCCTCAGGGCCTTGACCCCAAGATTAGCTTCGTCCCCATGCTCTGGGGCGATTCGCCCACGCACACCAACCAC
TGGGATTCTGATGCCGAAAAGGCTCTTGCCAGCGGAAGCAAGGCGTTCTTTAGCTTCAACGAGCCCGACATCAAG
GGACAGGCCAACCTGTCGCCCCAGCAGGCAGCCGCTAGTCACGTCAAGTACATGAACAAGTACGCTGGCCGAGCC
CTTATCGGTGCTCCCTCTGTCTCCAACAGCAACCTCGAGGGCGAGGGCCTTGCTTGGCTCAAGAGCTTCATGAGC
GCCTGCGAGAACCAGCAGGAAAAGTGCCAGGTTGACTTTTGCAACGTGCACTGGTATGCGCCTGCTTCGGCTTCC
AACACGCTCTTTGACCACCTCGAGGAGGCTCACCAGGCTTGTGGTGGCAAGCCCGTTTGGCTCACCGAGTTTGCT
CCTGTCGGCGACCCAGCGCAAACGTCGAGCTTCTTGCAGACCGTCATGCCCAAGCTTGAGCAGCTCAGCTACGTT
GATGCCTACTCGTACTTCATGGTGTCATCGGGCAACCTCATGTCTTCGGCTACCGACTTGAGCAGCTTTGGCAAG
GTTTACGCCAGCATGGCTTAA
Transcript >OphauB2|3240
ATGTACGCTAAAAGTCTGGCCACCATGGCCGCTGTGGCTTCGCTCTCTCAGCAGTCGCTGGCCTTCAACTCGCAC
CGCCACCTCCACCGCCAAGAGGCCAAGCGCGAAGTCGCCATGGACATGGTGACGGTTTGGGAAACGGTCTACGTG
ACGGAGTCGGAGCAGCCCACCCAGTTTGTTGCCGACTCCCGCCCCCAGCAGACGACTCTGACGGCTTTCACCACC
ATGACCAACATGGAGCCTATGCCTGAGCAGTCGTCGCCCAGCGAGGCAGCTGCCCCGGTTGTGCCTCCAGTTGAG
CCGGCCCAGCAGCCCCCGGCTGCGCCTCCAGTTGAACAGCCGCCGGTTGCGCCCCCGGTTGAGCAGCCCCCGCCA
AGCTCGGCTATCCAGGAGCCGCCTCCACCTCCCCCCCAGACCACCTTGTCTACAGCAGTTATGCCTGCTCCTGCC
CCTCCTGCGCCACAGGTCAGCAGCCCTGCTCCTCCTGCCTCTGCCGTCAAGGTGCAGCCCCAGAGCTCGTCGAAG
CCTCCTACTGCCAAGCCCTCGGGCAGCAACAAGACGCCTGGCGGTCCCGGCTTTGCTGGAAAGCGCGGTCTCGCT
TACAATGACGGCTCTCTGGCCAACACGTTTGGCAGCTCGTGCCAGCAATGCGGCTGGGCTTACAACTGGGCTTCA
TCGCCTCAGGGCCTTGACCCCAAGATTAGCTTCGTCCCCATGCTCTGGGGCGATTCGCCCACGCACACCAACCAC
TGGGATTCTGATGCCGAAAAGGCTCTTGCCAGCGGAAGCAAGGCGTTCTTTAGCTTCAACGAGCCCGACATCAAG
GGACAGGCCAACCTGTCGCCCCAGCAGGCAGCCGCTAGTCACGTCAAGTACATGAACAAGTACGCTGGCCGAGCC
CTTATCGGTGCTCCCTCTGTCTCCAACAGCAACCTCGAGGGCGAGGGCCTTGCTTGGCTCAAGAGCTTCATGAGC
GCCTGCGAGAACCAGCAGGAAAAGTGCCAGGTTGACTTTTGCAACGTGCACTGGTATGCGCCTGCTTCGGCTTCC
AACACGCTCTTTGACCACCTCGAGGAGGCTCACCAGGCTTGTGGTGGCAAGCCCGTTTGGCTCACCGAGTTTGCT
CCTGTCGGCGACCCAGCGCAAACGTCGAGCTTCTTGCAGACCGTCATGCCCAAGCTTGAGCAGCTCAGCTACGTT
GATGCCTACTCGTACTTCATGGTGTCATCGGGCAACCTCATGTCTTCGGCTACCGACTTGAGCAGCTTTGGCAAG
GTTTACGCCAGCATGGCTTAA
Gene >OphauB2|3240
ATGTACGCTAAAAGTCTGGCCACCATGGCCGCTGTGGCTTCGCTCTCTCAGCAGTCGCTGGCCTTCAACTCGCAC
CGCCACCTCCACCGCCAAGAGGCCAAGCGCGAAGTCGCCATGGACATGGTGACGGTTTGGGAAACGGTCTACGTG
ACGGAGTCGGAGCAGCCCACCCAGTTTGTTGCCGACTCCCGCCCCCAGCAGACGACTCTGACGGCTTTCACCACC
ATGACCAACATGGAGCCTATGCCTGAGCAGTCGTCGCCCAGCGAGGCAGCTGCCCCGGTTGTGCCTCCAGTTGAG
CCGGCCCAGCAGCCCCCGGCTGCGCCTCCAGTTGAACAGCCGCCGGTTGCGCCCCCGGTTGAGCAGCCCCCGCCA
AGCTCGGCTATCCAGGAGCCGCCTCCACCTCCCCCCCAGACCACCTTGTCTACAGCAGTTATGCCTGCTCCTGCC
CCTCCTGCGCCACAGGTCAGCAGCCCTGCTCCTCCTGCCTCTGCCGTCAAGGTGCAGCCCCAGAGCTCGTCGAAG
CCTCCTACTGCCAAGCCCTCGGGCAGCAACAAGACGCCTGGCGGTCCCGGCTTTGCTGGAAAGCGCGGTCTCGCT
TACAATGACGGCTCTCTGGCCAACACGTTTGGCAGCTCGTGCCAGCAATGCGGCTGGGCTTACAACTGGGCTTCA
TCGCCTCAGGGCCTTGACCCCAAGATTAGCTTCGTCCCCATGCTCTGGGGCGATTCGCCCACGCACACCAACCAC
TGGGATTCTGATGCCGAAAAGGCTCTTGCCAGCGGAAGCAAGGCGTTCTTTAGCTTCAACGAGCCCGACATCAAG
GGACAGGCCAACCTGTCGCCCCAGCAGGCAGCCGCTAGTCACGTCAAGTACATGAACAAGTACGCTGGCCGAGCC
CTTATCGGTGCTCCCTCTGTCTCCAACAGCAACCTCGAGGGCGAGGGCCTTGCTTGGCTCAAGAGCTTCATGAGC
GCCTGCGAGAACCAGCAGGAAAAGTGCCAGGTTGACTTTTGCAACGTGCACTGGTATGCGCCTGCTTCGGCTTCC
AACACGCTCTTTGACCACCTCGAGGAGGCTCACCAGGCTTGTGGTGGCAAGCCCGTTTGGCTCACCGAGTTTGCT
CCTGTCGGCGACCCAGCGCAAACGTCGAGCTTCTTGCAGACCGTCATGCCCAAGCTTGAGCAGCTCAGCTACGTT
GATGCCTACTCGTACTTCATGGTGTCATCGGGCAACCTCATGTCTTCGGCTACCGACTTGAGCAGCTTTGGCAAG
GTTTACGCCAGCATGGCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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