Protein ID | OphauB2|3240 |
Gene name | |
Location | Contig_21:16561..17857 |
Strand | - |
Gene length (bp) | 1296 |
Transcript length (bp) | 1296 |
Coding sequence length (bp) | 1296 |
Protein length (aa) | 432 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11790 | Glyco_hydro_cc | Glycosyl hydrolase catalytic core | 7.7E-56 | 198 | 427 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q09788|ASL1_SCHPO | Alkali-sensitive linkage protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=asl1 PE=1 SV=1 | 195 | 429 | 5.0E-15 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 22 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|3240 MYAKSLATMAAVASLSQQSLAFNSHRHLHRQEAKREVAMDMVTVWETVYVTESEQPTQFVADSRPQQTTLTAFTT MTNMEPMPEQSSPSEAAAPVVPPVEPAQQPPAAPPVEQPPVAPPVEQPPPSSAIQEPPPPPPQTTLSTAVMPAPA PPAPQVSSPAPPASAVKVQPQSSSKPPTAKPSGSNKTPGGPGFAGKRGLAYNDGSLANTFGSSCQQCGWAYNWAS SPQGLDPKISFVPMLWGDSPTHTNHWDSDAEKALASGSKAFFSFNEPDIKGQANLSPQQAAASHVKYMNKYAGRA LIGAPSVSNSNLEGEGLAWLKSFMSACENQQEKCQVDFCNVHWYAPASASNTLFDHLEEAHQACGGKPVWLTEFA PVGDPAQTSSFLQTVMPKLEQLSYVDAYSYFMVSSGNLMSSATDLSSFGKVYASMA* |
Coding | >OphauB2|3240 ATGTACGCTAAAAGTCTGGCCACCATGGCCGCTGTGGCTTCGCTCTCTCAGCAGTCGCTGGCCTTCAACTCGCAC CGCCACCTCCACCGCCAAGAGGCCAAGCGCGAAGTCGCCATGGACATGGTGACGGTTTGGGAAACGGTCTACGTG ACGGAGTCGGAGCAGCCCACCCAGTTTGTTGCCGACTCCCGCCCCCAGCAGACGACTCTGACGGCTTTCACCACC ATGACCAACATGGAGCCTATGCCTGAGCAGTCGTCGCCCAGCGAGGCAGCTGCCCCGGTTGTGCCTCCAGTTGAG CCGGCCCAGCAGCCCCCGGCTGCGCCTCCAGTTGAACAGCCGCCGGTTGCGCCCCCGGTTGAGCAGCCCCCGCCA AGCTCGGCTATCCAGGAGCCGCCTCCACCTCCCCCCCAGACCACCTTGTCTACAGCAGTTATGCCTGCTCCTGCC CCTCCTGCGCCACAGGTCAGCAGCCCTGCTCCTCCTGCCTCTGCCGTCAAGGTGCAGCCCCAGAGCTCGTCGAAG CCTCCTACTGCCAAGCCCTCGGGCAGCAACAAGACGCCTGGCGGTCCCGGCTTTGCTGGAAAGCGCGGTCTCGCT TACAATGACGGCTCTCTGGCCAACACGTTTGGCAGCTCGTGCCAGCAATGCGGCTGGGCTTACAACTGGGCTTCA TCGCCTCAGGGCCTTGACCCCAAGATTAGCTTCGTCCCCATGCTCTGGGGCGATTCGCCCACGCACACCAACCAC TGGGATTCTGATGCCGAAAAGGCTCTTGCCAGCGGAAGCAAGGCGTTCTTTAGCTTCAACGAGCCCGACATCAAG GGACAGGCCAACCTGTCGCCCCAGCAGGCAGCCGCTAGTCACGTCAAGTACATGAACAAGTACGCTGGCCGAGCC CTTATCGGTGCTCCCTCTGTCTCCAACAGCAACCTCGAGGGCGAGGGCCTTGCTTGGCTCAAGAGCTTCATGAGC GCCTGCGAGAACCAGCAGGAAAAGTGCCAGGTTGACTTTTGCAACGTGCACTGGTATGCGCCTGCTTCGGCTTCC AACACGCTCTTTGACCACCTCGAGGAGGCTCACCAGGCTTGTGGTGGCAAGCCCGTTTGGCTCACCGAGTTTGCT CCTGTCGGCGACCCAGCGCAAACGTCGAGCTTCTTGCAGACCGTCATGCCCAAGCTTGAGCAGCTCAGCTACGTT GATGCCTACTCGTACTTCATGGTGTCATCGGGCAACCTCATGTCTTCGGCTACCGACTTGAGCAGCTTTGGCAAG GTTTACGCCAGCATGGCTTAA |
Transcript | >OphauB2|3240 ATGTACGCTAAAAGTCTGGCCACCATGGCCGCTGTGGCTTCGCTCTCTCAGCAGTCGCTGGCCTTCAACTCGCAC CGCCACCTCCACCGCCAAGAGGCCAAGCGCGAAGTCGCCATGGACATGGTGACGGTTTGGGAAACGGTCTACGTG ACGGAGTCGGAGCAGCCCACCCAGTTTGTTGCCGACTCCCGCCCCCAGCAGACGACTCTGACGGCTTTCACCACC ATGACCAACATGGAGCCTATGCCTGAGCAGTCGTCGCCCAGCGAGGCAGCTGCCCCGGTTGTGCCTCCAGTTGAG CCGGCCCAGCAGCCCCCGGCTGCGCCTCCAGTTGAACAGCCGCCGGTTGCGCCCCCGGTTGAGCAGCCCCCGCCA AGCTCGGCTATCCAGGAGCCGCCTCCACCTCCCCCCCAGACCACCTTGTCTACAGCAGTTATGCCTGCTCCTGCC CCTCCTGCGCCACAGGTCAGCAGCCCTGCTCCTCCTGCCTCTGCCGTCAAGGTGCAGCCCCAGAGCTCGTCGAAG CCTCCTACTGCCAAGCCCTCGGGCAGCAACAAGACGCCTGGCGGTCCCGGCTTTGCTGGAAAGCGCGGTCTCGCT TACAATGACGGCTCTCTGGCCAACACGTTTGGCAGCTCGTGCCAGCAATGCGGCTGGGCTTACAACTGGGCTTCA TCGCCTCAGGGCCTTGACCCCAAGATTAGCTTCGTCCCCATGCTCTGGGGCGATTCGCCCACGCACACCAACCAC TGGGATTCTGATGCCGAAAAGGCTCTTGCCAGCGGAAGCAAGGCGTTCTTTAGCTTCAACGAGCCCGACATCAAG GGACAGGCCAACCTGTCGCCCCAGCAGGCAGCCGCTAGTCACGTCAAGTACATGAACAAGTACGCTGGCCGAGCC CTTATCGGTGCTCCCTCTGTCTCCAACAGCAACCTCGAGGGCGAGGGCCTTGCTTGGCTCAAGAGCTTCATGAGC GCCTGCGAGAACCAGCAGGAAAAGTGCCAGGTTGACTTTTGCAACGTGCACTGGTATGCGCCTGCTTCGGCTTCC AACACGCTCTTTGACCACCTCGAGGAGGCTCACCAGGCTTGTGGTGGCAAGCCCGTTTGGCTCACCGAGTTTGCT CCTGTCGGCGACCCAGCGCAAACGTCGAGCTTCTTGCAGACCGTCATGCCCAAGCTTGAGCAGCTCAGCTACGTT GATGCCTACTCGTACTTCATGGTGTCATCGGGCAACCTCATGTCTTCGGCTACCGACTTGAGCAGCTTTGGCAAG GTTTACGCCAGCATGGCTTAA |
Gene | >OphauB2|3240 ATGTACGCTAAAAGTCTGGCCACCATGGCCGCTGTGGCTTCGCTCTCTCAGCAGTCGCTGGCCTTCAACTCGCAC CGCCACCTCCACCGCCAAGAGGCCAAGCGCGAAGTCGCCATGGACATGGTGACGGTTTGGGAAACGGTCTACGTG ACGGAGTCGGAGCAGCCCACCCAGTTTGTTGCCGACTCCCGCCCCCAGCAGACGACTCTGACGGCTTTCACCACC ATGACCAACATGGAGCCTATGCCTGAGCAGTCGTCGCCCAGCGAGGCAGCTGCCCCGGTTGTGCCTCCAGTTGAG CCGGCCCAGCAGCCCCCGGCTGCGCCTCCAGTTGAACAGCCGCCGGTTGCGCCCCCGGTTGAGCAGCCCCCGCCA AGCTCGGCTATCCAGGAGCCGCCTCCACCTCCCCCCCAGACCACCTTGTCTACAGCAGTTATGCCTGCTCCTGCC CCTCCTGCGCCACAGGTCAGCAGCCCTGCTCCTCCTGCCTCTGCCGTCAAGGTGCAGCCCCAGAGCTCGTCGAAG CCTCCTACTGCCAAGCCCTCGGGCAGCAACAAGACGCCTGGCGGTCCCGGCTTTGCTGGAAAGCGCGGTCTCGCT TACAATGACGGCTCTCTGGCCAACACGTTTGGCAGCTCGTGCCAGCAATGCGGCTGGGCTTACAACTGGGCTTCA TCGCCTCAGGGCCTTGACCCCAAGATTAGCTTCGTCCCCATGCTCTGGGGCGATTCGCCCACGCACACCAACCAC TGGGATTCTGATGCCGAAAAGGCTCTTGCCAGCGGAAGCAAGGCGTTCTTTAGCTTCAACGAGCCCGACATCAAG GGACAGGCCAACCTGTCGCCCCAGCAGGCAGCCGCTAGTCACGTCAAGTACATGAACAAGTACGCTGGCCGAGCC CTTATCGGTGCTCCCTCTGTCTCCAACAGCAACCTCGAGGGCGAGGGCCTTGCTTGGCTCAAGAGCTTCATGAGC GCCTGCGAGAACCAGCAGGAAAAGTGCCAGGTTGACTTTTGCAACGTGCACTGGTATGCGCCTGCTTCGGCTTCC AACACGCTCTTTGACCACCTCGAGGAGGCTCACCAGGCTTGTGGTGGCAAGCCCGTTTGGCTCACCGAGTTTGCT CCTGTCGGCGACCCAGCGCAAACGTCGAGCTTCTTGCAGACCGTCATGCCCAAGCTTGAGCAGCTCAGCTACGTT GATGCCTACTCGTACTTCATGGTGTCATCGGGCAACCTCATGTCTTCGGCTACCGACTTGAGCAGCTTTGGCAAG GTTTACGCCAGCATGGCTTAA |