© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|3188 |
| Gene name | |
| Location | Contig_205:25303..26399 |
| Strand | + |
| Gene length (bp) | 1096 |
| Transcript length (bp) | 984 |
| Coding sequence length (bp) | 984 |
| Protein length (aa) | 328 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10176 | DUF2370 | Protein of unknown function (DUF2370) | 2.4E-87 | 104 | 310 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P38356|BSD2_YEAST | Metal homeostatis protein BSD2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BSD2 PE=1 SV=1 | 116 | 305 | 6.0E-37 |
| sp|Q9P3T9|BSD2_SCHPO | Probable metal homeostasis protein bsd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bsd1 PE=3 SV=1 | 112 | 304 | 3.0E-28 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0007034 | vacuolar transport | Yes |
| GO:0030001 | metal ion transport | Yes |
| GO:0046907 | intracellular transport | No |
| GO:0006811 | ion transport | No |
| GO:0009987 | cellular process | No |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0051649 | establishment of localization in cell | No |
| GO:0051234 | establishment of localization | No |
| GO:0006812 | cation transport | No |
| GO:0006810 | transport | No |
| GO:0051641 | cellular localization | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 179 | 201 | 22 |
| 2 | 269 | 288 | 19 |
| Orthofinder run ID | 4 |
| Orthogroup | 2840 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|3188 MSGRYERVNERDDHDNDVSVHHAPRITSPTSPPPSFHSRSSSPTGHRRVDSTLADAFDSDEASDDEDDDRQRLVR QNTITGSIPVGTGGAGEDADTSMSGASGSRPRQVGGGIGTDGVFANLSARPERTESEKEEQPPTYEQAAADAAPP YWETTILAPGFGGLDEVYVDGMPVGSVFSFIWNGMISTSFQLVGFLLTYLLHSTHAAKNGSRAGLGVTLIQYGFY MKGPNEDDPPVMSGPDGYAAPPDPNSHNFNPGEVTEGGGGDSSITGGDWIAWALMVVGWFILIKSMAEYLKARRH EQLILQSPDRGLGVPIIAEGESAERVV* |
| Coding | >OphauB2|3188 ATGTCGGGTCGCTATGAAAGGGTGAATGAGCGCGATGACCACGATAACGACGTCTCGGTCCATCATGCGCCCCGT ATTACCTCGCCTACGTCGCCACCTCCTTCATTTCACTCGAGATCTTCGTCTCCCACTGGCCATCGACGCGTCGAC TCTACCCTGGCAGATGCATTTGATAGCGATGAGGCAAGCGACGATGAAGATGATGACCGACAGCGCCTGGTTCGA CAAAATACGATTACCGGCAGCATCCCAGTTGGGACTGGTGGTGCGGGCGAAGATGCAGACACGTCCATGTCTGGG GCCTCTGGGTCGAGACCGAGGCAGGTAGGCGGAGGAATTGGAACAGACGGCGTCTTTGCAAACCTGTCAGCACGG CCTGAGCGTACAGAGTCGGAAAAGGAGGAGCAGCCACCAACGTATGAACAGGCTGCAGCCGACGCTGCCCCACCC TATTGGGAAACGACGATTCTGGCGCCTGGATTTGGCGGGTTAGACGAGGTTTACGTTGACGGCATGCCTGTGGGA TCGGTCTTTTCCTTCATCTGGAACGGAATGATATCCACATCTTTCCAACTCGTGGGCTTTTTACTCACATACCTG CTGCACTCGACACATGCAGCCAAGAATGGATCTCGGGCCGGGCTGGGTGTTACTCTCATTCAATACGGCTTCTAC ATGAAGGGCCCTAATGAAGACGACCCGCCCGTCATGAGTGGTCCAGACGGGTATGCAGCGCCACCCGACCCCAAC TCACACAATTTCAATCCAGGAGAAGTAACAGAGGGTGGGGGTGGAGACTCGTCAATAACGGGCGGCGACTGGATA GCGTGGGCTCTCATGGTGGTGGGCTGGTTCATCTTGATCAAGAGCATGGCCGAGTACCTTAAGGCGCGTCGGCAC GAGCAGTTGATTCTGCAGAGCCCCGACCGTGGGCTCGGCGTGCCTATTATTGCCGAGGGAGAGAGCGCCGAGAGA GTGGTGTGA |
| Transcript | >OphauB2|3188 ATGTCGGGTCGCTATGAAAGGGTGAATGAGCGCGATGACCACGATAACGACGTCTCGGTCCATCATGCGCCCCGT ATTACCTCGCCTACGTCGCCACCTCCTTCATTTCACTCGAGATCTTCGTCTCCCACTGGCCATCGACGCGTCGAC TCTACCCTGGCAGATGCATTTGATAGCGATGAGGCAAGCGACGATGAAGATGATGACCGACAGCGCCTGGTTCGA CAAAATACGATTACCGGCAGCATCCCAGTTGGGACTGGTGGTGCGGGCGAAGATGCAGACACGTCCATGTCTGGG GCCTCTGGGTCGAGACCGAGGCAGGTAGGCGGAGGAATTGGAACAGACGGCGTCTTTGCAAACCTGTCAGCACGG CCTGAGCGTACAGAGTCGGAAAAGGAGGAGCAGCCACCAACGTATGAACAGGCTGCAGCCGACGCTGCCCCACCC TATTGGGAAACGACGATTCTGGCGCCTGGATTTGGCGGGTTAGACGAGGTTTACGTTGACGGCATGCCTGTGGGA TCGGTCTTTTCCTTCATCTGGAACGGAATGATATCCACATCTTTCCAACTCGTGGGCTTTTTACTCACATACCTG CTGCACTCGACACATGCAGCCAAGAATGGATCTCGGGCCGGGCTGGGTGTTACTCTCATTCAATACGGCTTCTAC ATGAAGGGCCCTAATGAAGACGACCCGCCCGTCATGAGTGGTCCAGACGGGTATGCAGCGCCACCCGACCCCAAC TCACACAATTTCAATCCAGGAGAAGTAACAGAGGGTGGGGGTGGAGACTCGTCAATAACGGGCGGCGACTGGATA GCGTGGGCTCTCATGGTGGTGGGCTGGTTCATCTTGATCAAGAGCATGGCCGAGTACCTTAAGGCGCGTCGGCAC GAGCAGTTGATTCTGCAGAGCCCCGACCGTGGGCTCGGCGTGCCTATTATTGCCGAGGGAGAGAGCGCCGAGAGA GTGGTGTGA |
| Gene | >OphauB2|3188 ATGTCGGGTCGCTATGAAAGGGTACATGGAACCAAGCGCATTGTTGGCTTGATCACGCTGACACTGTGATTAGGT GAATGAGCGCGATGACCACGATAACGACGTCTCGGTCCATCATGCGCCCCGTATTACCTCGCCTACGTCGCCACC TCCTTCATTTCACTCGAGATCTTCGTCTCCCACTGGCCATCGACGCGTCGACTCTACCCTGGCAGATGCATTTGA TAGCGATGAGGCAAGCGACGATGAAGATGATGACCGACAGCGCCTGGTTCGACAAAATACGATTACCGGCAGCAT CCCAGTTGGGACTGGTGGTGCGGGCGAAGATGCAGACACGTCCATGTCTGGGGCCTCTGGGTCGAGACCGAGGCA GGTAGGCGGAGGAATTGGAACAGACGGCGTCTTTGCAAACCTGTCAGCACGGCCTGAGCGTACAGAGTCGGAAAA GGAGGAGCAGCCACCAGTAAGCAATGCATATTTATCAAGCAGAATTGTAAAACACGGCTAATTTGGAGGGCGGCA GACGTATGAACAGGCTGCAGCCGACGCTGCCCCACCCTATTGGGAAACGACGATTCTGGCGCCTGGATTTGGCGG GTTAGACGAGGTTTACGTTGACGGCATGCCTGTGGGATCGGTCTTTTCCTTCATCTGGAACGGAATGATATCCAC ATCTTTCCAACTCGTGGGCTTTTTACTCACATACCTGCTGCACTCGACACATGCAGCCAAGAATGGATCTCGGGC CGGGCTGGGTGTTACTCTCATTCAATACGGCTTCTACATGAAGGGCCCTAATGAAGACGACCCGCCCGTCATGAG TGGTCCAGACGGGTATGCAGCGCCACCCGACCCCAACTCACACAATTTCAATCCAGGAGAAGTAACAGAGGGTGG GGGTGGAGACTCGTCAATAACGGGCGGCGACTGGATAGCGTGGGCTCTCATGGTGGTGGGCTGGTTCATCTTGAT CAAGAGCATGGCCGAGTACCTTAAGGCGCGTCGGCACGAGCAGTTGATTCTGCAGAGCCCCGACCGTGGGCTCGG CGTGCCTATTATTGCCGAGGGAGAGAGCGCCGAGAGAGTGGTGTGA |