Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|3178
Gene name
LocationContig_205:2713..4029
Strand-
Gene length (bp)1316
Transcript length (bp)1176
Coding sequence length (bp)1176
Protein length (aa) 392

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 1.0E-05 43 75

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P28349|NIT4_NEUCR Nitrogen assimilation transcription factor nit-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nit-4 PE=3 SV=2 26 389 2.0E-15
sp|P28348|NIRA_EMENI Nitrogen assimilation transcription factor nirA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nirA PE=3 SV=1 41 389 4.0E-15

GO

GO Term Description Terminal node
GO:0008270 zinc ion binding Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0046914 transition metal ion binding No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0010468 regulation of gene expression No
GO:0140110 transcription regulator activity No
GO:0008150 biological_process No
GO:0005488 binding No
GO:0003674 molecular_function No
GO:0009889 regulation of biosynthetic process No
GO:0043167 ion binding No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0003700 DNA-binding transcription factor activity No
GO:0060255 regulation of macromolecule metabolic process No
GO:0050789 regulation of biological process No
GO:0031323 regulation of cellular metabolic process No
GO:0046872 metal ion binding No
GO:0043169 cation binding No
GO:0065007 biological regulation No
GO:2001141 regulation of RNA biosynthetic process No
GO:0050794 regulation of cellular process No
GO:0051252 regulation of RNA metabolic process No
GO:0031326 regulation of cellular biosynthetic process No
GO:0019222 regulation of metabolic process No
GO:0080090 regulation of primary metabolic process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:1903506 regulation of nucleic acid-templated transcription No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup330
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|473
Ophiocordyceps australis 1348a (Ghana) OphauG2|5753
Ophiocordyceps australis map64 (Brazil) OphauB2|1217
Ophiocordyceps australis map64 (Brazil) OphauB2|3178 (this protein)
Ophiocordyceps camponoti-floridani Ophcf2|06621
Ophiocordyceps camponoti-rufipedis Ophun1|7420
Ophiocordyceps subramaniannii Hirsu2|3507
Ophiocordyceps subramaniannii Hirsu2|9814
Ophiocordyceps subramaniannii Hirsu2|9968
Ophiocordyceps subramaniannii Hirsu2|9969

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|3178
MSQNSNPAPRAILPAAPTPVILTDFSNIPPGANSREGNVPNSACQACRIRKCKCSREQPCEYCRSNEIECIYNNN
NNNSSKSELKNLKEKHEKLQKKHDTYQDFFAALKNLSSDAGSEVLKQIRQGADVESVVRLIHSGDLVQQTLLVPE
SRLRHNLPRVPMMPSRLQTADNDYLNCIVFDAVFPNNQSPGAPIHVSESLQRYQTLYLRPFHTARIVEPRLERIK
LSKWTTVSANDSILRSLLHDYLLHQYPTFPVFQKDIFLDAAEAGDHDLCSSLLVNALLANACQCHEKFAPCHESE
EAESLGSRFLAEARRLLHMSGDVSSLPALQGCMLLHTALSSRSMNHVGYPFFSRAMSMANKLGLFTEHGQSKSKM
QVARHFSAWCLFCWQA*
Coding >OphauB2|3178
ATGTCTCAAAATAGCAATCCAGCCCCGCGCGCGATTTTGCCCGCAGCACCAACCCCTGTTATTTTGACCGATTTC
TCGAATATTCCTCCAGGAGCAAACAGCCGCGAAGGCAACGTGCCCAACAGTGCTTGCCAGGCGTGCCGCATCCGC
AAGTGCAAGTGCTCTAGAGAACAGCCCTGTGAATACTGCCGTAGCAACGAGATTGAGTGCATCTACAACAACAAC
AACAACAACTCGTCCAAGTCGGAGCTCAAGAACCTCAAGGAGAAGCACGAGAAGCTGCAAAAGAAACACGACACG
TATCAAGACTTTTTTGCCGCCCTCAAGAATCTCTCGTCAGATGCGGGCAGCGAGGTTCTCAAGCAGATTCGACAG
GGCGCTGATGTTGAGTCTGTTGTGCGTCTGATACATAGCGGCGACCTGGTGCAGCAGACGTTGCTCGTGCCCGAG
TCGAGGCTTCGCCACAATCTGCCCAGAGTGCCCATGATGCCCTCGAGGCTGCAGACTGCAGACAATGACTATCTC
AACTGCATTGTTTTTGATGCTGTCTTTCCGAATAACCAGTCGCCGGGGGCGCCCATTCACGTCTCGGAGAGCCTG
CAGAGATACCAGACGCTCTACCTTCGGCCCTTTCACACGGCCCGCATCGTTGAACCGCGGCTAGAGCGCATAAAG
CTTTCCAAATGGACCACTGTCTCTGCCAATGATTCAATCTTGCGCAGTCTGCTGCACGACTACCTGCTGCATCAG
TATCCCACCTTTCCCGTCTTCCAAAAGGACATTTTCCTCGACGCTGCCGAGGCGGGAGACCATGACTTGTGTTCG
TCGCTGCTTGTCAATGCCCTCCTGGCAAATGCCTGTCAATGCCATGAAAAGTTTGCTCCCTGCCACGAATCCGAA
GAAGCTGAATCGCTCGGCTCCCGTTTTCTCGCCGAGGCGCGGCGTCTCTTGCATATGAGCGGCGACGTGTCCAGT
CTGCCCGCTCTTCAGGGCTGCATGCTACTGCACACGGCCTTAAGCAGCCGCAGCATGAACCATGTTGGATATCCC
TTTTTTAGTCGCGCCATGTCCATGGCCAATAAGCTGGGTCTCTTTACCGAGCACGGGCAAAGCAAGTCCAAGATG
CAGGTGGCACGACACTTTTCTGCCTGGTGTCTTTTCTGCTGGCAAGCGTGA
Transcript >OphauB2|3178
ATGTCTCAAAATAGCAATCCAGCCCCGCGCGCGATTTTGCCCGCAGCACCAACCCCTGTTATTTTGACCGATTTC
TCGAATATTCCTCCAGGAGCAAACAGCCGCGAAGGCAACGTGCCCAACAGTGCTTGCCAGGCGTGCCGCATCCGC
AAGTGCAAGTGCTCTAGAGAACAGCCCTGTGAATACTGCCGTAGCAACGAGATTGAGTGCATCTACAACAACAAC
AACAACAACTCGTCCAAGTCGGAGCTCAAGAACCTCAAGGAGAAGCACGAGAAGCTGCAAAAGAAACACGACACG
TATCAAGACTTTTTTGCCGCCCTCAAGAATCTCTCGTCAGATGCGGGCAGCGAGGTTCTCAAGCAGATTCGACAG
GGCGCTGATGTTGAGTCTGTTGTGCGTCTGATACATAGCGGCGACCTGGTGCAGCAGACGTTGCTCGTGCCCGAG
TCGAGGCTTCGCCACAATCTGCCCAGAGTGCCCATGATGCCCTCGAGGCTGCAGACTGCAGACAATGACTATCTC
AACTGCATTGTTTTTGATGCTGTCTTTCCGAATAACCAGTCGCCGGGGGCGCCCATTCACGTCTCGGAGAGCCTG
CAGAGATACCAGACGCTCTACCTTCGGCCCTTTCACACGGCCCGCATCGTTGAACCGCGGCTAGAGCGCATAAAG
CTTTCCAAATGGACCACTGTCTCTGCCAATGATTCAATCTTGCGCAGTCTGCTGCACGACTACCTGCTGCATCAG
TATCCCACCTTTCCCGTCTTCCAAAAGGACATTTTCCTCGACGCTGCCGAGGCGGGAGACCATGACTTGTGTTCG
TCGCTGCTTGTCAATGCCCTCCTGGCAAATGCCTGTCAATGCCATGAAAAGTTTGCTCCCTGCCACGAATCCGAA
GAAGCTGAATCGCTCGGCTCCCGTTTTCTCGCCGAGGCGCGGCGTCTCTTGCATATGAGCGGCGACGTGTCCAGT
CTGCCCGCTCTTCAGGGCTGCATGCTACTGCACACGGCCTTAAGCAGCCGCAGCATGAACCATGTTGGATATCCC
TTTTTTAGTCGCGCCATGTCCATGGCCAATAAGCTGGGTCTCTTTACCGAGCACGGGCAAAGCAAGTCCAAGATG
CAGGTGGCACGACACTTTTCTGCCTGGTGTCTTTTCTGCTGGCAAGCGTGA
Gene >OphauB2|3178
ATGTCTCAAAATAGCAATCCAGCCCCGCGCGCGATTTTGCCCGCAGCACCAACCCCTGTTATTTTGACCGATTTC
TCGAATATTCCTCCAGGAGCAAACAGCCGCGAAGGCAACGTGCCCAACAGTGCTTGCCAGGCGTGCCGCATCCGC
AAGTGCAAGGTCTGCACTTGGCCCTCTTCTTTTCCTCCTTTCTGCCTGGCTTGGCTTAAATATTGACTGGCTTGA
ACAGTGCTCTAGAGAACAGCCCTGTGAATACTGCCGTAGCAACGAGATTGAGTGCATCTACAACAACAACAACAA
CAACTCGTCCAAGTCGGAGCTCAAGAACCTCAAGGAGAAGCACGAGAAGCTGCAAAAGAAACACGACACGTATCA
AGACTTTTTTGCCGCCCTCAAGAATCTCTCGTCAGATGCGGGCAGCGAGGTTCTCAAGCAGATTCGACAGGGCGC
TGATGTTGAGTCTGTTGTGCGTCTGATACATAGCGGCGACCTGGTGCAGCAGACGTTGCTCGTGCCCGAGTCGAG
GCTTCGCCACAATCTGCCCAGAGTGCCCATGATGCCCTCGAGGCTGCAGACTGCAGACAATGACTATCTCAACTG
CATTGTTTTTGATGCTGTCTTTCCGAATAACCAGTCGCCGGGGGCGCCCATTCACGTCTCGGAGAGCCTGCAGAG
ATACCAGACGCTCTACCTTCGGCCCTTTCACACGGCCCGCATCGTTGAACCGCGGCTAGAGCGCATAAAGCTTTC
CAAATGGACCACTGTCTCTGCCAATGATTCAATCTTGCGCAGTCTGCTGCACGACTACCTGCTGCATCAGTATCC
CACCTTTCCCGTCTTCCAAAAGGACATTTTCCTCGACGCTGCCGAGGCGGGAGACCATGACTTGTGTTCGTCGCT
GCTTGTCAATGCCCTCCTGGCAAATGCCTGTGTGAGTCGTCACTTGCCATGCGCCCTTTTGCACTAGTAGGACTA
GCTGCGTCTGACTAGTCGGTTTGCAGCAATGCCATGAAAAGTTTGCTCCCTGCCACGAATCCGAAGAAGCTGAAT
CGCTCGGCTCCCGTTTTCTCGCCGAGGCGCGGCGTCTCTTGCATATGAGCGGCGACGTGTCCAGTCTGCCCGCTC
TTCAGGGCTGCATGCTACTGCACACGGCCTTAAGCAGCCGCAGCATGAACCATGTTGGATATCCCTTTTTTAGTC
GCGCCATGTCCATGGCCAATAAGCTGGGTCTCTTTACCGAGCACGGGCAAAGCAAGTCCAAGATGCAGGTGGCAC
GACACTTTTCTGCCTGGTGTCTTTTCTGCTGGCAAGCGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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