Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|3176
Gene name
LocationContig_204:26939..27782
Strand+
Gene length (bp)843
Transcript length (bp)771
Coding sequence length (bp)771
Protein length (aa) 257

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00080 Sod_Cu Copper/zinc superoxide dismutase (SODC) 7.3E-07 48 168

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4B5D4|SOD5_ARTBC Cell surface Cu-only superoxide dismutase ARB_03674 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03674 PE=1 SV=1 16 197 1.0E-35
sp|Q5ACV9|SOD6_CANAL Cell surface superoxide dismutase [Cu-Zn] 6 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SOD6 PE=1 SV=1 23 181 2.0E-22
sp|Q5AD07|SOD5_CANAL Cell surface Cu-only superoxide dismutase 5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SOD5 PE=1 SV=1 47 177 9.0E-22
sp|Q5AD05|SOD4_CANAL Cell surface superoxide dismutase [Cu-Zn] 4 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SOD4 PE=1 SV=1 47 177 2.0E-21

GO

GO Term Description Terminal node
GO:0046872 metal ion binding Yes
GO:0006801 superoxide metabolic process Yes
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0008152 metabolic process No
GO:0005488 binding No
GO:0008150 biological_process No
GO:0044237 cellular metabolic process No
GO:0072593 reactive oxygen species metabolic process No
GO:0043167 ion binding No
GO:0043169 cation binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1511
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|212
Ophiocordyceps australis map64 (Brazil) OphauB2|3176 (this protein)
Ophiocordyceps camponoti-floridani Ophcf2|00381
Ophiocordyceps camponoti-rufipedis Ophun1|5283
Ophiocordyceps kimflemingae Ophio5|2757
Ophiocordyceps subramaniannii Hirsu2|11169

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|3176
MCLAGSAVAQIGSFPEAMPATGNPTGITYRADLPQEPFFTAGPLNGNVRGSIEATAPADGVGVEFTVKFDNVPTF
GGGPFTYHIHVDAVPADGNCTKALTHLDPLNRGETPTCDSSAPSTCQVGDLAGKHGKVTSGPFNVQYLDPYVSLR
EGDPAFMGNRSFVFHFANKTRITCANFYRVNGESQNGGPSYYGPRPTTFPNLPAGNSTGQPGGYATGSAGLGRPT
AGFPTVGAAATRHLSSSVVVAVAMFALALLY*
Coding >OphauB2|3176
ATGTGCCTGGCTGGCTCGGCTGTAGCTCAAATCGGCTCGTTCCCAGAGGCGATGCCTGCTACCGGCAACCCAACG
GGCATCACATACAGAGCTGATCTTCCGCAAGAGCCCTTCTTCACCGCGGGACCTCTCAACGGCAATGTGCGGGGG
TCCATTGAGGCGACAGCGCCTGCAGACGGCGTGGGCGTCGAGTTTACCGTCAAGTTTGACAATGTGCCAACCTTT
GGCGGCGGTCCGTTTACCTACCACATCCACGTCGACGCCGTGCCCGCAGACGGCAACTGCACCAAGGCCCTGACC
CATCTGGATCCGCTCAACCGCGGCGAGACGCCCACGTGCGACTCGTCGGCGCCATCCACCTGCCAAGTGGGCGAC
CTGGCGGGCAAGCACGGCAAAGTCACGTCTGGGCCCTTCAACGTGCAGTACCTCGACCCCTATGTGTCGCTGCGC
GAGGGCGACCCCGCCTTCATGGGCAACCGCTCCTTTGTCTTCCACTTTGCCAACAAGACGCGCATCACGTGTGCA
AACTTTTACCGCGTCAATGGCGAGAGCCAAAACGGCGGCCCGAGCTACTACGGCCCGCGGCCCACCACTTTTCCC
AACCTGCCCGCCGGCAACTCGACAGGCCAGCCGGGCGGCTATGCCACGGGCTCGGCCGGCCTGGGCCGTCCAACT
GCTGGCTTTCCCACTGTGGGCGCTGCAGCCACGCGCCACTTGTCCTCGTCAGTCGTCGTTGCAGTGGCCATGTTT
GCGCTTGCCTTGTTGTACTAG
Transcript >OphauB2|3176
ATGTGCCTGGCTGGCTCGGCTGTAGCTCAAATCGGCTCGTTCCCAGAGGCGATGCCTGCTACCGGCAACCCAACG
GGCATCACATACAGAGCTGATCTTCCGCAAGAGCCCTTCTTCACCGCGGGACCTCTCAACGGCAATGTGCGGGGG
TCCATTGAGGCGACAGCGCCTGCAGACGGCGTGGGCGTCGAGTTTACCGTCAAGTTTGACAATGTGCCAACCTTT
GGCGGCGGTCCGTTTACCTACCACATCCACGTCGACGCCGTGCCCGCAGACGGCAACTGCACCAAGGCCCTGACC
CATCTGGATCCGCTCAACCGCGGCGAGACGCCCACGTGCGACTCGTCGGCGCCATCCACCTGCCAAGTGGGCGAC
CTGGCGGGCAAGCACGGCAAAGTCACGTCTGGGCCCTTCAACGTGCAGTACCTCGACCCCTATGTGTCGCTGCGC
GAGGGCGACCCCGCCTTCATGGGCAACCGCTCCTTTGTCTTCCACTTTGCCAACAAGACGCGCATCACGTGTGCA
AACTTTTACCGCGTCAATGGCGAGAGCCAAAACGGCGGCCCGAGCTACTACGGCCCGCGGCCCACCACTTTTCCC
AACCTGCCCGCCGGCAACTCGACAGGCCAGCCGGGCGGCTATGCCACGGGCTCGGCCGGCCTGGGCCGTCCAACT
GCTGGCTTTCCCACTGTGGGCGCTGCAGCCACGCGCCACTTGTCCTCGTCAGTCGTCGTTGCAGTGGCCATGTTT
GCGCTTGCCTTGTTGTACTAG
Gene >OphauB2|3176
ATGTGCCTGGCTGGCTCGGCTGTAGCTCAAATCGGCTCGTTCCCAGAGGCGATGCCTGCTACCGGCAACCCAACG
GGCATCACATACAGAGCTGATCTTCCGCAAGAGCCCTTCTTCACCGCGGGACCTCTCAACGGCAATGTGCGGGGG
TCCATTGAGGCGACAGCGCCTGCAGACGGCGTGGGCGTCGAGTTTACCGTCAAGTTTGACAATGTGCCAACCTTT
GGCGGCGGTCCGTTTAGTGAGTAGCTCGCGAGCAGAGGGAGAGCCCGTGTGCATGGCCTCAAGACTAACCTCGTC
TTCTCTCGCACAGCCTACCACATCCACGTCGACGCCGTGCCCGCAGACGGCAACTGCACCAAGGCCCTGACCCAT
CTGGATCCGCTCAACCGCGGCGAGACGCCCACGTGCGACTCGTCGGCGCCATCCACCTGCCAAGTGGGCGACCTG
GCGGGCAAGCACGGCAAAGTCACGTCTGGGCCCTTCAACGTGCAGTACCTCGACCCCTATGTGTCGCTGCGCGAG
GGCGACCCCGCCTTCATGGGCAACCGCTCCTTTGTCTTCCACTTTGCCAACAAGACGCGCATCACGTGTGCAAAC
TTTTACCGCGTCAATGGCGAGAGCCAAAACGGCGGCCCGAGCTACTACGGCCCGCGGCCCACCACTTTTCCCAAC
CTGCCCGCCGGCAACTCGACAGGCCAGCCGGGCGGCTATGCCACGGGCTCGGCCGGCCTGGGCCGTCCAACTGCT
GGCTTTCCCACTGTGGGCGCTGCAGCCACGCGCCACTTGTCCTCGTCAGTCGTCGTTGCAGTGGCCATGTTTGCG
CTTGCCTTGTTGTACTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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