Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|3158
Gene name
Location	Contig_202:23191..24211
Strand	+
Gene length (bp)	1020
Transcript length (bp)	1020
Coding sequence length (bp)	1020
Protein length (aa)	340

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF06687	SUR7	SUR7/PalI family	2.9E-33	8	247

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O13729\|PUN1_SCHPO	SUR7 family protein pun1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pun1 PE=3 SV=1	2	248	6.0E-06

GO

GO Term	Description	Terminal node
GO:0005886	plasma membrane	Yes
GO:0110165	cellular anatomical entity	No
GO:0016020	membrane	No
GO:0005575	cellular_component	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 23	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	10	32	22
2	155	177	22
3	187	209	22
4	230	252	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|3158 MGVGRFACVALPLLLILASIIALLVATLSGVTHHSMHMFRVNVSELSINPASIGNIASKLGVNLEARLDAIQTDN ITAGNLGLNDTYDINLWGYCTTDRDGRRHCTKAQFDWATHKLNTTWIENFGAVAGVHITLPDEVQSALRVFRTVT RWTEVAFIVALVALGVEFFVGILANMSRVISCLTWFISIVAVVLVGAAAGLATATASIVIGAIEGTAKYYGVRGS IDTSFLAAVWIATAFALGAAFFWIFTICCCKPERRNRGAYRSTKHASSDDEKLLPSRGYAPLGNDREMSGGAYYE GNNQHHMSMAPPLHSPQPPSYSGANERANMAYEPYSHRV*
Coding	>OphauB2\|3158 ATGGGTGTCGGACGCTTCGCCTGTGTGGCTCTGCCACTGCTTCTAATCCTGGCATCCATTATTGCTCTTCTCGTT GCCACGCTCTCGGGCGTCACACATCACAGCATGCACATGTTCCGCGTCAACGTCTCGGAGCTCTCCATTAATCCA GCAAGCATAGGCAACATTGCCAGCAAACTAGGTGTCAACCTTGAGGCACGCCTCGATGCGATACAAACAGACAAC ATCACGGCGGGCAACCTTGGCCTCAACGACACCTACGACATCAACCTCTGGGGCTATTGCACCACAGACAGAGAC GGCCGACGCCATTGCACAAAGGCTCAGTTTGACTGGGCCACGCACAAGCTCAACACGACTTGGATCGAAAACTTT GGTGCTGTCGCCGGCGTCCATATTACTCTGCCTGACGAGGTACAGAGCGCGCTGCGCGTCTTTCGCACCGTGACC CGATGGACCGAGGTGGCATTTATTGTGGCCTTGGTAGCTCTTGGAGTCGAGTTCTTTGTTGGAATCCTGGCCAAT ATGTCGCGAGTAATCTCGTGTCTGACGTGGTTCATCTCCATTGTCGCCGTGGTGCTCGTGGGCGCTGCCGCTGGT CTGGCCACAGCCACGGCATCGATTGTTATTGGTGCCATTGAGGGCACGGCCAAGTACTATGGGGTCCGGGGCTCC ATCGACACAAGCTTTCTAGCTGCTGTGTGGATAGCAACAGCGTTTGCGCTGGGAGCAGCTTTCTTCTGGATCTTT ACGATTTGCTGCTGCAAGCCTGAACGTCGCAACCGCGGCGCCTATCGCAGCACGAAGCATGCTTCATCAGACGAC GAGAAGCTGCTTCCGTCGAGGGGCTATGCGCCCTTGGGCAACGATCGCGAAATGAGTGGCGGCGCCTACTATGAG GGCAACAACCAGCACCACATGAGCATGGCGCCGCCTTTGCACTCGCCGCAGCCGCCAAGCTATTCAGGCGCCAAC GAGCGGGCAAATATGGCCTATGAACCCTACTCACACCGAGTATAA
Transcript	>OphauB2\|3158 ATGGGTGTCGGACGCTTCGCCTGTGTGGCTCTGCCACTGCTTCTAATCCTGGCATCCATTATTGCTCTTCTCGTT GCCACGCTCTCGGGCGTCACACATCACAGCATGCACATGTTCCGCGTCAACGTCTCGGAGCTCTCCATTAATCCA GCAAGCATAGGCAACATTGCCAGCAAACTAGGTGTCAACCTTGAGGCACGCCTCGATGCGATACAAACAGACAAC ATCACGGCGGGCAACCTTGGCCTCAACGACACCTACGACATCAACCTCTGGGGCTATTGCACCACAGACAGAGAC GGCCGACGCCATTGCACAAAGGCTCAGTTTGACTGGGCCACGCACAAGCTCAACACGACTTGGATCGAAAACTTT GGTGCTGTCGCCGGCGTCCATATTACTCTGCCTGACGAGGTACAGAGCGCGCTGCGCGTCTTTCGCACCGTGACC CGATGGACCGAGGTGGCATTTATTGTGGCCTTGGTAGCTCTTGGAGTCGAGTTCTTTGTTGGAATCCTGGCCAAT ATGTCGCGAGTAATCTCGTGTCTGACGTGGTTCATCTCCATTGTCGCCGTGGTGCTCGTGGGCGCTGCCGCTGGT CTGGCCACAGCCACGGCATCGATTGTTATTGGTGCCATTGAGGGCACGGCCAAGTACTATGGGGTCCGGGGCTCC ATCGACACAAGCTTTCTAGCTGCTGTGTGGATAGCAACAGCGTTTGCGCTGGGAGCAGCTTTCTTCTGGATCTTT ACGATTTGCTGCTGCAAGCCTGAACGTCGCAACCGCGGCGCCTATCGCAGCACGAAGCATGCTTCATCAGACGAC GAGAAGCTGCTTCCGTCGAGGGGCTATGCGCCCTTGGGCAACGATCGCGAAATGAGTGGCGGCGCCTACTATGAG GGCAACAACCAGCACCACATGAGCATGGCGCCGCCTTTGCACTCGCCGCAGCCGCCAAGCTATTCAGGCGCCAAC GAGCGGGCAAATATGGCCTATGAACCCTACTCACACCGAGTATAA
Gene	>OphauB2\|3158 ATGGGTGTCGGACGCTTCGCCTGTGTGGCTCTGCCACTGCTTCTAATCCTGGCATCCATTATTGCTCTTCTCGTT GCCACGCTCTCGGGCGTCACACATCACAGCATGCACATGTTCCGCGTCAACGTCTCGGAGCTCTCCATTAATCCA GCAAGCATAGGCAACATTGCCAGCAAACTAGGTGTCAACCTTGAGGCACGCCTCGATGCGATACAAACAGACAAC ATCACGGCGGGCAACCTTGGCCTCAACGACACCTACGACATCAACCTCTGGGGCTATTGCACCACAGACAGAGAC GGCCGACGCCATTGCACAAAGGCTCAGTTTGACTGGGCCACGCACAAGCTCAACACGACTTGGATCGAAAACTTT GGTGCTGTCGCCGGCGTCCATATTACTCTGCCTGACGAGGTACAGAGCGCGCTGCGCGTCTTTCGCACCGTGACC CGATGGACCGAGGTGGCATTTATTGTGGCCTTGGTAGCTCTTGGAGTCGAGTTCTTTGTTGGAATCCTGGCCAAT ATGTCGCGAGTAATCTCGTGTCTGACGTGGTTCATCTCCATTGTCGCCGTGGTGCTCGTGGGCGCTGCCGCTGGT CTGGCCACAGCCACGGCATCGATTGTTATTGGTGCCATTGAGGGCACGGCCAAGTACTATGGGGTCCGGGGCTCC ATCGACACAAGCTTTCTAGCTGCTGTGTGGATAGCAACAGCGTTTGCGCTGGGAGCAGCTTTCTTCTGGATCTTT ACGATTTGCTGCTGCAAGCCTGAACGTCGCAACCGCGGCGCCTATCGCAGCACGAAGCATGCTTCATCAGACGAC GAGAAGCTGCTTCCGTCGAGGGGCTATGCGCCCTTGGGCAACGATCGCGAAATGAGTGGCGGCGCCTACTATGAG GGCAACAACCAGCACCACATGAGCATGGCGCCGCCTTTGCACTCGCCGCAGCCGCCAAGCTATTCAGGCGCCAAC GAGCGGGCAAATATGGCCTATGAACCCTACTCACACCGAGTATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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