Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|3138
Gene name
LocationContig_201:2038..3349
Strand+
Gene length (bp)1311
Transcript length (bp)1023
Coding sequence length (bp)1023
Protein length (aa) 341

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05721 PhyH Phytanoyl-CoA dioxygenase (PhyH) 5.1E-22 11 279

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O69060|HTXA_PSEST Probable alpha-ketoglutarate-dependent hypophosphite dioxygenase OS=Pseudomonas stutzeri GN=htxA PE=3 SV=1 114 287 3.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 59 81 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|3138
MAACPEQVDSFKRNGFLIVKDFLSPDETRDLQKWAQQVHDMEPSDTSDFMPYEVRVCRFFLTRIYTHTLSLSLFL
SLFLSLSLSLPLPLSLSLSLSLLSPAPLPQTVAKTAVSQEVNDRGERVLCRTENFADGHSGFNALLRGDRLLQLV
GSLSGEAMSLFKEKINYKLSGSGGFAPHIDANAYNHIKKVKHLTVLLSVDQSSQANGCLEVVPGSHEMDIPLDET
TRCIQDGWVQSQAWKSIELEPALTPVRRVGQLVVFTSYLAHRSGANRSKHSRRAIYATYNCASEGDLHQEYYAHR
KKEWPATHMRKAGERYERGALVYAYGSPMLSVETGHQVAF*
Coding >OphauB2|3138
ATGGCCGCCTGCCCGGAGCAAGTGGACTCGTTCAAGCGCAATGGCTTCTTGATTGTCAAAGACTTTCTCAGCCCC
GACGAGACTCGTGACTTGCAGAAATGGGCGCAGCAAGTCCACGACATGGAGCCAAGTGACACGTCCGACTTTATG
CCCTACGAGGTTCGAGTCTGCCGTTTCTTTCTCACACGCATATACACACACACACTCTCTCTCTCTCTCTTTCTC
TCTCTCTTTCTCTCTCTCTCTCTTTCTCTCCCTCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTCCCCA
GCCCCATTGCCCCAGACGGTGGCTAAGACTGCCGTTTCTCAGGAGGTCAATGATCGAGGCGAGCGCGTCCTCTGT
CGCACCGAAAACTTTGCCGACGGCCATTCAGGCTTCAACGCCTTGCTGCGAGGCGACAGACTCCTCCAGCTCGTT
GGCAGTCTTTCGGGAGAGGCCATGAGCCTCTTCAAAGAAAAGATCAACTACAAGCTCTCTGGCAGCGGCGGTTTT
GCTCCTCACATTGACGCCAATGCCTACAACCACATCAAAAAGGTCAAGCACTTGACAGTCCTGCTCAGCGTGGAC
CAGTCAAGCCAGGCAAACGGCTGTCTCGAGGTGGTGCCTGGCAGCCATGAAATGGACATTCCTCTCGACGAGACG
ACAAGATGCATCCAAGACGGCTGGGTACAATCTCAGGCCTGGAAAAGCATTGAGCTCGAGCCGGCGCTGACCCCC
GTCCGTCGTGTAGGCCAACTCGTCGTCTTCACCTCATATCTTGCCCACCGCAGCGGCGCCAACAGGAGCAAGCAC
AGTCGGCGGGCCATTTACGCAACCTACAACTGCGCCAGCGAGGGCGACTTGCATCAAGAATACTACGCCCATAGG
AAAAAGGAGTGGCCGGCAACGCACATGCGCAAAGCGGGAGAGCGATATGAAAGGGGGGCGCTCGTCTATGCCTAC
GGCTCGCCAATGCTGAGTGTAGAAACAGGTCATCAGGTAGCCTTTTGA
Transcript >OphauB2|3138
ATGGCCGCCTGCCCGGAGCAAGTGGACTCGTTCAAGCGCAATGGCTTCTTGATTGTCAAAGACTTTCTCAGCCCC
GACGAGACTCGTGACTTGCAGAAATGGGCGCAGCAAGTCCACGACATGGAGCCAAGTGACACGTCCGACTTTATG
CCCTACGAGGTTCGAGTCTGCCGTTTCTTTCTCACACGCATATACACACACACACTCTCTCTCTCTCTCTTTCTC
TCTCTCTTTCTCTCTCTCTCTCTTTCTCTCCCTCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTCCCCA
GCCCCATTGCCCCAGACGGTGGCTAAGACTGCCGTTTCTCAGGAGGTCAATGATCGAGGCGAGCGCGTCCTCTGT
CGCACCGAAAACTTTGCCGACGGCCATTCAGGCTTCAACGCCTTGCTGCGAGGCGACAGACTCCTCCAGCTCGTT
GGCAGTCTTTCGGGAGAGGCCATGAGCCTCTTCAAAGAAAAGATCAACTACAAGCTCTCTGGCAGCGGCGGTTTT
GCTCCTCACATTGACGCCAATGCCTACAACCACATCAAAAAGGTCAAGCACTTGACAGTCCTGCTCAGCGTGGAC
CAGTCAAGCCAGGCAAACGGCTGTCTCGAGGTGGTGCCTGGCAGCCATGAAATGGACATTCCTCTCGACGAGACG
ACAAGATGCATCCAAGACGGCTGGGTACAATCTCAGGCCTGGAAAAGCATTGAGCTCGAGCCGGCGCTGACCCCC
GTCCGTCGTGTAGGCCAACTCGTCGTCTTCACCTCATATCTTGCCCACCGCAGCGGCGCCAACAGGAGCAAGCAC
AGTCGGCGGGCCATTTACGCAACCTACAACTGCGCCAGCGAGGGCGACTTGCATCAAGAATACTACGCCCATAGG
AAAAAGGAGTGGCCGGCAACGCACATGCGCAAAGCGGGAGAGCGATATGAAAGGGGGGCGCTCGTCTATGCCTAC
GGCTCGCCAATGCTGAGTGTAGAAACAGGTCATCAGGTAGCCTTTTGA
Gene >OphauB2|3138
ATGGCCGCCTGCCCGGAGCAAGTGGACTCGTTCAAGCGCAATGGCTTCTTGATTGTCAAAGACTTTCTCAGCCCC
GACGAGACTCGTGACTTGCAGAAATGGGCGCAGCAAGTCCACGACATGGAGCCAAGTGACACGTCCGACTTTATG
CCCTACGAGGTTCGAGTCTGCCGTTTCTTTCTCACACGCATATACACACACACACTCTCTCTCTCTCTCTTTCTC
TCTCTCTTTCTCTCTCTCTCTCTTTCTCTCCCTCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTCCCCA
GCCCCATTGCCCCAGACGGTGGCTAAGACTGCCGTTTCTCAGGAGGTCAATGATCGAGGCGAGCGCGTCCTCTGT
CGCACCGAAAACTTTGCCGACGGCCATTCAGGCTTCAACGCCTTGCTGCGAGGCGACAGACTCCTCCAGCTCGTT
GGCAGTCTTTCGGGAGAGGCCATGAGCCTCTTCAAAGAAAAGATCAACTACAAGCTCTCTGGCAGCGGTATTGGC
AGCAAGAGGCGTCTTGTAAGACCAAAATGCTGACTCTTACAGGCGGTTTTGCTCCTCACATTGACGCCAATGCCT
ACAACCACATCAAAAAGGTCAAGCACTTGACAGTCCTGCTCAGCGTGGACCAGTCAAGCCAGGCAAACGGCTGTC
TCGAGGTGGTGCCTGGCAGCCATGAAATGGACATTCCTCTCGACGAGACGACAAGATGCATCCAAGACGGCTGGG
TACAATCTCAGGCCTGGAAAAGCATTGAGCTCGAGCCGGGTAATGAAAAGAATGCGTCTTTTTTTTTTTTTTCCA
TCTTGACAATTCATCTTGATGCTTCATCTTGACAATTCATCTTGATGCTTCACCTTGACAATTCATCTTGATGCT
TCACCTTGACAATTCATCTTGATGCTTCACCTTGACAATTCACCTTGATGCTTCATCTTGACAATTCATCTTGAT
GCTTCACCTCGACAACTCATCTTGATGCTTCACCTCGACACTTCATTGGCAGCGCTGACCCCCGTCCGTCGTGTA
GGCCAACTCGTCGTCTTCACCTCATATCTTGCCCACCGCAGCGGCGCCAACAGGAGCAAGCACAGTCGGCGGGCC
ATTTACGCAACCTACAACTGCGCCAGCGAGGGCGACTTGCATCAAGAATACTACGCCCATAGGAAAAAGGAGTGG
CCGGCAACGCACATGCGCAAAGCGGGAGAGCGATATGAAAGGGGGGCGCTCGTCTATGCCTACGGCTCGCCAATG
CTGAGTGTAGAAACAGGTCATCAGGTAGCCTTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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