© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|3128 |
| Gene name | |
| Location | Contig_200:1536..2298 |
| Strand | - |
| Gene length (bp) | 762 |
| Transcript length (bp) | 762 |
| Coding sequence length (bp) | 762 |
| Protein length (aa) | 254 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02917 | Pertussis_S1 | Pertussis toxin, subunit 1 | 5.1E-06 | 59 | 107 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005576 | extracellular region | Yes |
| GO:0003950 | NAD+ ADP-ribosyltransferase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016757 | glycosyltransferase activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0003674 | molecular_function | No |
| GO:0016763 | pentosyltransferase activity | No |
| GO:0016740 | transferase activity | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 17 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|3128 MRLYTLILASLLGVYAVPTSEIDAYPSLARRGKPDGRREGISAEQASQEEVPDGSDVGVFFRGDSRAPEEVFRDG FRPQGANMDLQQHLSFAGGSGYVSLSRSQAASRLYAFGRSADGNSAGYVYVVVPEQLPEGYYIPRLFPNDRTVRI NREFAVAGAIPAGSIAGAYTYENGIADVPTGWLPNQGYAYSEHRRYDPSRDWCFGNICNLVGNIARWVCGGNTDP CVQRRIDAFERDGGAGNQQGKSQQRRGE* |
| Coding | >OphauB2|3128 ATGCGTCTTTATACATTAATTTTGGCCTCCCTCTTGGGCGTCTATGCTGTTCCCACAAGCGAGATAGACGCCTAT CCTTCTCTTGCGCGACGCGGAAAGCCTGATGGCAGGCGCGAAGGCATCTCAGCAGAACAGGCGTCGCAGGAAGAG GTGCCCGACGGCAGTGATGTGGGCGTCTTCTTTCGGGGAGACTCGCGAGCCCCTGAGGAGGTGTTCCGAGACGGC TTCAGGCCGCAGGGGGCCAACATGGACCTCCAGCAGCACCTGAGCTTCGCCGGCGGCTCGGGCTACGTGTCGTTG TCGCGCTCTCAAGCTGCGTCCAGGCTGTATGCCTTTGGGCGGTCTGCCGACGGCAACAGCGCCGGATACGTCTAC GTGGTGGTGCCTGAGCAGCTGCCCGAAGGCTACTATATTCCCAGATTGTTTCCCAACGATCGAACGGTGCGCATC AACCGCGAGTTTGCTGTGGCTGGTGCTATTCCTGCTGGCTCGATTGCTGGCGCTTATACTTATGAGAATGGCATT GCCGACGTGCCAACCGGGTGGCTCCCCAACCAAGGATATGCCTACAGCGAGCATCGCCGGTACGACCCGAGTAGA GACTGGTGTTTTGGCAACATTTGTAACCTGGTGGGCAACATTGCGCGATGGGTTTGCGGCGGAAACACGGATCCC TGTGTGCAGAGGCGCATCGATGCCTTTGAGAGAGACGGGGGAGCAGGAAACCAGCAAGGCAAGTCCCAGCAGCGC CGTGGAGAATAG |
| Transcript | >OphauB2|3128 ATGCGTCTTTATACATTAATTTTGGCCTCCCTCTTGGGCGTCTATGCTGTTCCCACAAGCGAGATAGACGCCTAT CCTTCTCTTGCGCGACGCGGAAAGCCTGATGGCAGGCGCGAAGGCATCTCAGCAGAACAGGCGTCGCAGGAAGAG GTGCCCGACGGCAGTGATGTGGGCGTCTTCTTTCGGGGAGACTCGCGAGCCCCTGAGGAGGTGTTCCGAGACGGC TTCAGGCCGCAGGGGGCCAACATGGACCTCCAGCAGCACCTGAGCTTCGCCGGCGGCTCGGGCTACGTGTCGTTG TCGCGCTCTCAAGCTGCGTCCAGGCTGTATGCCTTTGGGCGGTCTGCCGACGGCAACAGCGCCGGATACGTCTAC GTGGTGGTGCCTGAGCAGCTGCCCGAAGGCTACTATATTCCCAGATTGTTTCCCAACGATCGAACGGTGCGCATC AACCGCGAGTTTGCTGTGGCTGGTGCTATTCCTGCTGGCTCGATTGCTGGCGCTTATACTTATGAGAATGGCATT GCCGACGTGCCAACCGGGTGGCTCCCCAACCAAGGATATGCCTACAGCGAGCATCGCCGGTACGACCCGAGTAGA GACTGGTGTTTTGGCAACATTTGTAACCTGGTGGGCAACATTGCGCGATGGGTTTGCGGCGGAAACACGGATCCC TGTGTGCAGAGGCGCATCGATGCCTTTGAGAGAGACGGGGGAGCAGGAAACCAGCAAGGCAAGTCCCAGCAGCGC CGTGGAGAATAG |
| Gene | >OphauB2|3128 ATGCGTCTTTATACATTAATTTTGGCCTCCCTCTTGGGCGTCTATGCTGTTCCCACAAGCGAGATAGACGCCTAT CCTTCTCTTGCGCGACGCGGAAAGCCTGATGGCAGGCGCGAAGGCATCTCAGCAGAACAGGCGTCGCAGGAAGAG GTGCCCGACGGCAGTGATGTGGGCGTCTTCTTTCGGGGAGACTCGCGAGCCCCTGAGGAGGTGTTCCGAGACGGC TTCAGGCCGCAGGGGGCCAACATGGACCTCCAGCAGCACCTGAGCTTCGCCGGCGGCTCGGGCTACGTGTCGTTG TCGCGCTCTCAAGCTGCGTCCAGGCTGTATGCCTTTGGGCGGTCTGCCGACGGCAACAGCGCCGGATACGTCTAC GTGGTGGTGCCTGAGCAGCTGCCCGAAGGCTACTATATTCCCAGATTGTTTCCCAACGATCGAACGGTGCGCATC AACCGCGAGTTTGCTGTGGCTGGTGCTATTCCTGCTGGCTCGATTGCTGGCGCTTATACTTATGAGAATGGCATT GCCGACGTGCCAACCGGGTGGCTCCCCAACCAAGGATATGCCTACAGCGAGCATCGCCGGTACGACCCGAGTAGA GACTGGTGTTTTGGCAACATTTGTAACCTGGTGGGCAACATTGCGCGATGGGTTTGCGGCGGAAACACGGATCCC TGTGTGCAGAGGCGCATCGATGCCTTTGAGAGAGACGGGGGAGCAGGAAACCAGCAAGGCAAGTCCCAGCAGCGC CGTGGAGAATAG |