© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|312 |
| Gene name | |
| Location | Contig_101:60417..61566 |
| Strand | - |
| Gene length (bp) | 1149 |
| Transcript length (bp) | 1095 |
| Coding sequence length (bp) | 1095 |
| Protein length (aa) | 365 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05460 | ORC6 | Origin recognition complex subunit 6 (ORC6) | 1.3E-34 | 9 | 328 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005664 | nuclear origin of replication recognition complex | Yes |
| GO:0006260 | DNA replication | Yes |
| GO:0003677 | DNA binding | Yes |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0005575 | cellular_component | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0005488 | binding | No |
| GO:0003674 | molecular_function | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0000808 | origin recognition complex | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0090304 | nucleic acid metabolic process | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0140513 | nuclear protein-containing complex | No |
| GO:0044260 | cellular macromolecule metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0006259 | DNA metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0032991 | protein-containing complex | No |
| GO:0003676 | nucleic acid binding | No |
| GO:0046483 | heterocycle metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 18 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|312 MGRQMELALLSLMPSWGSDLPPALVDLADSLMAQSQHKASTLKADEEIARHYACANIACDRLKVALDLPPIQPRP PVAPRVYKRLYAHLDNVLASKLGPQRSNGKRASTRDGALSSRPLPSRLTPTKDASLAPFRPSKEPKSTGRRHALH PWVPPVIRFLCAETDSMKFMPTMLAGVECIVTPGGRMTQDGWTQKHVSEVVAAVYFYVVMRVRAMATNESLDRSG YVPLRKTILGLMEQARSQVQINQVDQAQAWRDWKHVKPKDFDEAVAHVKDQDWLISDWYEAIAHVAQHPGHGETA ATQASQEAASTSQRRADTMLQEKYDYISVARREEYRQWKESMLSMIGQAKLHDCNTNTKHVCFG* |
| Coding | >OphauB2|312 ATGGGCCGGCAAATGGAGCTTGCGCTGCTGTCGCTGATGCCCTCTTGGGGCTCAGACCTCCCGCCAGCTCTGGTC GACTTGGCCGATTCCCTCATGGCCCAGTCGCAGCACAAGGCCAGTACTCTCAAGGCCGACGAGGAGATAGCGCGC CACTATGCCTGTGCCAACATTGCCTGCGACCGGCTCAAAGTAGCCCTCGATCTCCCGCCCATACAACCACGGCCA CCAGTTGCACCTCGCGTATACAAGCGACTCTATGCACACCTTGACAATGTTCTTGCAAGCAAACTCGGCCCCCAG CGCTCCAACGGCAAGCGCGCGTCAACAAGGGATGGCGCTCTCAGTTCACGGCCTCTGCCGTCGAGACTGACGCCG ACCAAGGATGCCAGCCTGGCGCCCTTTAGGCCAAGCAAGGAGCCCAAGTCGACAGGCAGACGCCATGCCTTGCAT CCCTGGGTACCGCCAGTTATCCGATTTCTGTGCGCCGAGACGGACAGCATGAAATTTATGCCCACGATGCTGGCC GGCGTCGAATGCATTGTCACGCCTGGGGGCCGCATGACCCAAGATGGCTGGACCCAGAAGCACGTCAGCGAAGTC GTTGCTGCCGTCTATTTCTACGTGGTGATGCGAGTCCGAGCCATGGCAACGAATGAATCGCTTGACCGCAGTGGC TATGTGCCCTTACGCAAGACAATCTTGGGCCTCATGGAGCAAGCACGCAGCCAGGTGCAAATCAATCAAGTCGAC CAAGCGCAAGCCTGGCGCGACTGGAAACATGTCAAGCCCAAAGACTTTGACGAGGCAGTGGCGCATGTCAAGGAC CAGGACTGGCTTATCAGTGACTGGTACGAGGCCATTGCTCATGTTGCACAGCATCCTGGACATGGCGAGACAGCG GCAACTCAAGCTAGCCAAGAAGCGGCCTCTACTTCACAGCGGCGTGCCGATACTATGCTCCAAGAAAAATATGAC TACATCAGCGTGGCGCGGAGAGAAGAGTACCGGCAGTGGAAAGAATCAATGCTGTCCATGATTGGGCAAGCCAAG CTGCATGACTGCAACACCAACACCAAGCATGTATGCTTTGGATAA |
| Transcript | >OphauB2|312 ATGGGCCGGCAAATGGAGCTTGCGCTGCTGTCGCTGATGCCCTCTTGGGGCTCAGACCTCCCGCCAGCTCTGGTC GACTTGGCCGATTCCCTCATGGCCCAGTCGCAGCACAAGGCCAGTACTCTCAAGGCCGACGAGGAGATAGCGCGC CACTATGCCTGTGCCAACATTGCCTGCGACCGGCTCAAAGTAGCCCTCGATCTCCCGCCCATACAACCACGGCCA CCAGTTGCACCTCGCGTATACAAGCGACTCTATGCACACCTTGACAATGTTCTTGCAAGCAAACTCGGCCCCCAG CGCTCCAACGGCAAGCGCGCGTCAACAAGGGATGGCGCTCTCAGTTCACGGCCTCTGCCGTCGAGACTGACGCCG ACCAAGGATGCCAGCCTGGCGCCCTTTAGGCCAAGCAAGGAGCCCAAGTCGACAGGCAGACGCCATGCCTTGCAT CCCTGGGTACCGCCAGTTATCCGATTTCTGTGCGCCGAGACGGACAGCATGAAATTTATGCCCACGATGCTGGCC GGCGTCGAATGCATTGTCACGCCTGGGGGCCGCATGACCCAAGATGGCTGGACCCAGAAGCACGTCAGCGAAGTC GTTGCTGCCGTCTATTTCTACGTGGTGATGCGAGTCCGAGCCATGGCAACGAATGAATCGCTTGACCGCAGTGGC TATGTGCCCTTACGCAAGACAATCTTGGGCCTCATGGAGCAAGCACGCAGCCAGGTGCAAATCAATCAAGTCGAC CAAGCGCAAGCCTGGCGCGACTGGAAACATGTCAAGCCCAAAGACTTTGACGAGGCAGTGGCGCATGTCAAGGAC CAGGACTGGCTTATCAGTGACTGGTACGAGGCCATTGCTCATGTTGCACAGCATCCTGGACATGGCGAGACAGCG GCAACTCAAGCTAGCCAAGAAGCGGCCTCTACTTCACAGCGGCGTGCCGATACTATGCTCCAAGAAAAATATGAC TACATCAGCGTGGCGCGGAGAGAAGAGTACCGGCAGTGGAAAGAATCAATGCTGTCCATGATTGGGCAAGCCAAG CTGCATGACTGCAACACCAACACCAAGCATGTATGCTTTGGATAA |
| Gene | >OphauB2|312 ATGGGCCGGCAAATGGAGCTTGCGCTGCTGTCGCTGATGCCCTCTTGGGGCTCAGACCTCCCGCCAGCTCTGGTC GACTTGGCCGATTCCCTCATGGCCCAGTCGCAGCACAAGGCCAGTACTCTCAAGGCCGACGAGGAGATAGCGCGC CACTATGCCTGTGCCAACATTGCCTGCGACCGGTAAGCCTCGAGGCATCTCCTTGGCGAGGCCAGCAACTGATGG CATTGTGCAAGGCTCAAAGTAGCCCTCGATCTCCCGCCCATACAACCACGGCCACCAGTTGCACCTCGCGTATAC AAGCGACTCTATGCACACCTTGACAATGTTCTTGCAAGCAAACTCGGCCCCCAGCGCTCCAACGGCAAGCGCGCG TCAACAAGGGATGGCGCTCTCAGTTCACGGCCTCTGCCGTCGAGACTGACGCCGACCAAGGATGCCAGCCTGGCG CCCTTTAGGCCAAGCAAGGAGCCCAAGTCGACAGGCAGACGCCATGCCTTGCATCCCTGGGTACCGCCAGTTATC CGATTTCTGTGCGCCGAGACGGACAGCATGAAATTTATGCCCACGATGCTGGCCGGCGTCGAATGCATTGTCACG CCTGGGGGCCGCATGACCCAAGATGGCTGGACCCAGAAGCACGTCAGCGAAGTCGTTGCTGCCGTCTATTTCTAC GTGGTGATGCGAGTCCGAGCCATGGCAACGAATGAATCGCTTGACCGCAGTGGCTATGTGCCCTTACGCAAGACA ATCTTGGGCCTCATGGAGCAAGCACGCAGCCAGGTGCAAATCAATCAAGTCGACCAAGCGCAAGCCTGGCGCGAC TGGAAACATGTCAAGCCCAAAGACTTTGACGAGGCAGTGGCGCATGTCAAGGACCAGGACTGGCTTATCAGTGAC TGGTACGAGGCCATTGCTCATGTTGCACAGCATCCTGGACATGGCGAGACAGCGGCAACTCAAGCTAGCCAAGAA GCGGCCTCTACTTCACAGCGGCGTGCCGATACTATGCTCCAAGAAAAATATGACTACATCAGCGTGGCGCGGAGA GAAGAGTACCGGCAGTGGAAAGAATCAATGCTGTCCATGATTGGGCAAGCCAAGCTGCATGACTGCAACACCAAC ACCAAGCATGTATGCTTTGGATAA |