Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|3103
Gene name
LocationContig_20:145637..146061
Strand-
Gene length (bp)424
Transcript length (bp)285
Coding sequence length (bp)285
Protein length (aa) 95

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05047 L51_S25_CI-B8 Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain 1.1E-12 28 78

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q07842|NDUA2_NEUCR NADH-ubiquinone oxidoreductase 10.5 kDa subunit OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-10.5 PE=4 SV=1 1 93 6.0E-40
sp|Q9FIJ2|NDUA2_ARATH NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thaliana GN=At5g47890 PE=3 SV=1 1 91 2.0E-22
sp|Q02370|NDUA2_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Bos taurus GN=NDUFA2 PE=1 SV=2 11 90 6.0E-15
sp|P0CB80|NDUA2_PONPY NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo pygmaeus GN=NDUFA2 PE=3 SV=1 11 91 3.0E-14
sp|P0CB79|NDUA2_PONAB NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo abelii GN=NDUFA2 PE=3 SV=1 11 91 3.0E-14
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[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q07842|NDUA2_NEUCR NADH-ubiquinone oxidoreductase 10.5 kDa subunit OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-10.5 PE=4 SV=1 1 93 6.0E-40
sp|Q9FIJ2|NDUA2_ARATH NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thaliana GN=At5g47890 PE=3 SV=1 1 91 2.0E-22
sp|Q02370|NDUA2_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Bos taurus GN=NDUFA2 PE=1 SV=2 11 90 6.0E-15
sp|P0CB80|NDUA2_PONPY NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo pygmaeus GN=NDUFA2 PE=3 SV=1 11 91 3.0E-14
sp|P0CB79|NDUA2_PONAB NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo abelii GN=NDUFA2 PE=3 SV=1 11 91 3.0E-14
sp|Q4R5E2|NDUA2_MACFA NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Macaca fascicularis GN=NDUFA2 PE=3 SV=3 11 90 4.0E-14
sp|Q9CQ75|NDUA2_MOUSE NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Mus musculus GN=Ndufa2 PE=1 SV=3 11 90 7.0E-14
sp|O43678|NDUA2_HUMAN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Homo sapiens GN=NDUFA2 PE=1 SV=3 11 86 8.0E-14
sp|Q0MQ92|NDUA2_GORGO NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Gorilla gorilla gorilla GN=NDUFA2 PE=3 SV=3 11 86 2.0E-12
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|3103
MSSKYAFTKTLKEVRFLFCQSSEQSAAVRSFLARAYPTMKKNNPHVPIMLREAAGTLPRVFARYEMGNEQQQSLD
GLSDKQIEEAVAGMVQKSV*
Coding >OphauB2|3103
ATGTCGTCCAAGTACGCCTTCACAAAGACACTCAAGGAGGTGCGCTTTCTCTTCTGCCAGTCCTCGGAACAAAGC
GCCGCCGTACGCTCCTTTCTCGCACGCGCCTATCCCACAATGAAGAAGAACAATCCTCATGTGCCAATTATGCTG
CGCGAAGCAGCCGGCACTCTGCCCCGTGTTTTTGCTCGTTACGAAATGGGCAATGAGCAACAACAATCTCTCGAC
GGCCTTTCAGACAAGCAGATTGAGGAAGCTGTAGCTGGCATGGTCCAGAAGAGTGTATAA
Transcript >OphauB2|3103
ATGTCGTCCAAGTACGCCTTCACAAAGACACTCAAGGAGGTGCGCTTTCTCTTCTGCCAGTCCTCGGAACAAAGC
GCCGCCGTACGCTCCTTTCTCGCACGCGCCTATCCCACAATGAAGAAGAACAATCCTCATGTGCCAATTATGCTG
CGCGAAGCAGCCGGCACTCTGCCCCGTGTTTTTGCTCGTTACGAAATGGGCAATGAGCAACAACAATCTCTCGAC
GGCCTTTCAGACAAGCAGATTGAGGAAGCTGTAGCTGGCATGGTCCAGAAGAGTGTATAA
Gene >OphauB2|3103
ATGTCGTCCAAGTACGCCTTCACAAAGACACTCAAGGAGGTGCGCTTTCTCTTCTGCCAGTCCTCGGAACAAAGC
GCCGCCGTACGGCAAGTCACCGCTTCCACGCGAGAGAGAGAATTGACAAGAGAAAGAGATGCTAATGCGACTCCA
AAAGCTCCTTTCTCGCACGCGCCTATCCCACAATGAAGAAGAACAATCCTCATGTGCCAATTATGCTGCGCGAAG
CAGCCGGCACTCTGCCCCGTGTTTTTGCTCGTTACGGTACGCCCCTTGTCTTGTTCGTCCTGTGGCCTTGGTTGC
TCATCGCTCAAGCTGCGGCTAACCACACCCAGAAATGGGCAATGAGCAACAACAATCTCTCGACGGCCTTTCAGA
CAAGCAGATTGAGGAAGCTGTAGCTGGCATGGTCCAGAAGAGTGTATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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