Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|3088
Gene name
LocationContig_20:113961..114758
Strand-
Gene length (bp)797
Transcript length (bp)723
Coding sequence length (bp)723
Protein length (aa) 241

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05730 CFEM CFEM domain 4.9E-13 20 84

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

Domain # Start End Length
1 216 238 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|3088
MKATLITFAMAGLVAAQQGLEGVPECATSCISEGIPKVGCQNGDVACACKNQEKLMGLVAPCVISNCKGDDIIKA
QSAASAACKGAGAGGSGNGNGDNSSGSDSASGSSMASTSMASSSGGMGGVGGVGGGMTSAMTGTDSMSMGTMTNS
DMSMTTDSSASDSGSDNTGGAGGATQTDSNSASQTDSSASNTTDRPSSTTDSSSSRTRSSTSSRTSSTGAAAAGP
AVGALAAIFAAAVAL*
Coding >OphauB2|3088
ATGAAGGCCACTTTGATCACTTTCGCCATGGCTGGCCTTGTGGCCGCCCAGCAGGGCCTAGAGGGCGTCCCTGAA
TGTGCTACCTCTTGTATCTCGGAAGGCATCCCCAAGGTGGGCTGCCAGAACGGAGACGTGGCTTGTGCTTGCAAG
AACCAGGAAAAGCTCATGGGCCTCGTTGCTCCTTGTGTCATCAGCAATTGCAAGGGTGACGACATCATAAAGGCT
CAGTCGGCCGCCAGCGCTGCCTGCAAGGGTGCCGGTGCCGGCGGCAGCGGCAATGGCAATGGCGACAACAGCTCC
GGCTCCGACTCTGCCTCGGGCAGCTCAATGGCCTCGACGTCGATGGCTTCATCGAGCGGCGGCATGGGCGGTGTT
GGCGGCGTCGGCGGCGGCATGACGTCGGCCATGACTGGCACCGATTCCATGTCGATGGGCACCATGACGAACAGC
GACATGTCAATGACTACTGACTCATCGGCATCCGACTCTGGCTCTGATAACACTGGCGGTGCCGGTGGCGCTACA
CAGACGGACAGCAATTCGGCCTCGCAAACTGACTCGTCTGCCTCCAACACGACGGACCGCCCCAGCAGCACTACT
GACTCTAGCTCGTCGCGCACCAGGTCGTCGACCTCTTCTCGCACCTCGAGCACTGGAGCTGCTGCCGCTGGTCCC
GCTGTGGGTGCCTTGGCTGCCATTTTTGCTGCCGCTGTGGCGCTGTAG
Transcript >OphauB2|3088
ATGAAGGCCACTTTGATCACTTTCGCCATGGCTGGCCTTGTGGCCGCCCAGCAGGGCCTAGAGGGCGTCCCTGAA
TGTGCTACCTCTTGTATCTCGGAAGGCATCCCCAAGGTGGGCTGCCAGAACGGAGACGTGGCTTGTGCTTGCAAG
AACCAGGAAAAGCTCATGGGCCTCGTTGCTCCTTGTGTCATCAGCAATTGCAAGGGTGACGACATCATAAAGGCT
CAGTCGGCCGCCAGCGCTGCCTGCAAGGGTGCCGGTGCCGGCGGCAGCGGCAATGGCAATGGCGACAACAGCTCC
GGCTCCGACTCTGCCTCGGGCAGCTCAATGGCCTCGACGTCGATGGCTTCATCGAGCGGCGGCATGGGCGGTGTT
GGCGGCGTCGGCGGCGGCATGACGTCGGCCATGACTGGCACCGATTCCATGTCGATGGGCACCATGACGAACAGC
GACATGTCAATGACTACTGACTCATCGGCATCCGACTCTGGCTCTGATAACACTGGCGGTGCCGGTGGCGCTACA
CAGACGGACAGCAATTCGGCCTCGCAAACTGACTCGTCTGCCTCCAACACGACGGACCGCCCCAGCAGCACTACT
GACTCTAGCTCGTCGCGCACCAGGTCGTCGACCTCTTCTCGCACCTCGAGCACTGGAGCTGCTGCCGCTGGTCCC
GCTGTGGGTGCCTTGGCTGCCATTTTTGCTGCCGCTGTGGCGCTGTAG
Gene >OphauB2|3088
ATGAAGGCCACTTTGATCACTTTCGCCATGGCTGGCCTTGTGGCCGCCCAGCAGGGCCTAGAGGGCGTCCCTGAA
TGTGCTGTACGTCTCTGCATTGATGCTGCCCAGCTCCTCCATGTCAAACATGAAGCTTGCTGCTGACTTTGTCGT
CTTAGACCTCTTGTATCTCGGAAGGCATCCCCAAGGTGGGCTGCCAGAACGGAGACGTGGCTTGTGCTTGCAAGA
ACCAGGAAAAGCTCATGGGCCTCGTTGCTCCTTGTGTCATCAGCAATTGCAAGGGTGACGACATCATAAAGGCTC
AGTCGGCCGCCAGCGCTGCCTGCAAGGGTGCCGGTGCCGGCGGCAGCGGCAATGGCAATGGCGACAACAGCTCCG
GCTCCGACTCTGCCTCGGGCAGCTCAATGGCCTCGACGTCGATGGCTTCATCGAGCGGCGGCATGGGCGGTGTTG
GCGGCGTCGGCGGCGGCATGACGTCGGCCATGACTGGCACCGATTCCATGTCGATGGGCACCATGACGAACAGCG
ACATGTCAATGACTACTGACTCATCGGCATCCGACTCTGGCTCTGATAACACTGGCGGTGCCGGTGGCGCTACAC
AGACGGACAGCAATTCGGCCTCGCAAACTGACTCGTCTGCCTCCAACACGACGGACCGCCCCAGCAGCACTACTG
ACTCTAGCTCGTCGCGCACCAGGTCGTCGACCTCTTCTCGCACCTCGAGCACTGGAGCTGCTGCCGCTGGTCCCG
CTGTGGGTGCCTTGGCTGCCATTTTTGCTGCCGCTGTGGCGCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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