© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|3088 |
| Gene name | |
| Location | Contig_20:113961..114758 |
| Strand | - |
| Gene length (bp) | 797 |
| Transcript length (bp) | 723 |
| Coding sequence length (bp) | 723 |
| Protein length (aa) | 241 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05730 | CFEM | CFEM domain | 4.9E-13 | 20 | 84 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 16 | 0.999754 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 216 | 238 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 977 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|3088 MKATLITFAMAGLVAAQQGLEGVPECATSCISEGIPKVGCQNGDVACACKNQEKLMGLVAPCVISNCKGDDIIKA QSAASAACKGAGAGGSGNGNGDNSSGSDSASGSSMASTSMASSSGGMGGVGGVGGGMTSAMTGTDSMSMGTMTNS DMSMTTDSSASDSGSDNTGGAGGATQTDSNSASQTDSSASNTTDRPSSTTDSSSSRTRSSTSSRTSSTGAAAAGP AVGALAAIFAAAVAL* |
| Coding | >OphauB2|3088 ATGAAGGCCACTTTGATCACTTTCGCCATGGCTGGCCTTGTGGCCGCCCAGCAGGGCCTAGAGGGCGTCCCTGAA TGTGCTACCTCTTGTATCTCGGAAGGCATCCCCAAGGTGGGCTGCCAGAACGGAGACGTGGCTTGTGCTTGCAAG AACCAGGAAAAGCTCATGGGCCTCGTTGCTCCTTGTGTCATCAGCAATTGCAAGGGTGACGACATCATAAAGGCT CAGTCGGCCGCCAGCGCTGCCTGCAAGGGTGCCGGTGCCGGCGGCAGCGGCAATGGCAATGGCGACAACAGCTCC GGCTCCGACTCTGCCTCGGGCAGCTCAATGGCCTCGACGTCGATGGCTTCATCGAGCGGCGGCATGGGCGGTGTT GGCGGCGTCGGCGGCGGCATGACGTCGGCCATGACTGGCACCGATTCCATGTCGATGGGCACCATGACGAACAGC GACATGTCAATGACTACTGACTCATCGGCATCCGACTCTGGCTCTGATAACACTGGCGGTGCCGGTGGCGCTACA CAGACGGACAGCAATTCGGCCTCGCAAACTGACTCGTCTGCCTCCAACACGACGGACCGCCCCAGCAGCACTACT GACTCTAGCTCGTCGCGCACCAGGTCGTCGACCTCTTCTCGCACCTCGAGCACTGGAGCTGCTGCCGCTGGTCCC GCTGTGGGTGCCTTGGCTGCCATTTTTGCTGCCGCTGTGGCGCTGTAG |
| Transcript | >OphauB2|3088 ATGAAGGCCACTTTGATCACTTTCGCCATGGCTGGCCTTGTGGCCGCCCAGCAGGGCCTAGAGGGCGTCCCTGAA TGTGCTACCTCTTGTATCTCGGAAGGCATCCCCAAGGTGGGCTGCCAGAACGGAGACGTGGCTTGTGCTTGCAAG AACCAGGAAAAGCTCATGGGCCTCGTTGCTCCTTGTGTCATCAGCAATTGCAAGGGTGACGACATCATAAAGGCT CAGTCGGCCGCCAGCGCTGCCTGCAAGGGTGCCGGTGCCGGCGGCAGCGGCAATGGCAATGGCGACAACAGCTCC GGCTCCGACTCTGCCTCGGGCAGCTCAATGGCCTCGACGTCGATGGCTTCATCGAGCGGCGGCATGGGCGGTGTT GGCGGCGTCGGCGGCGGCATGACGTCGGCCATGACTGGCACCGATTCCATGTCGATGGGCACCATGACGAACAGC GACATGTCAATGACTACTGACTCATCGGCATCCGACTCTGGCTCTGATAACACTGGCGGTGCCGGTGGCGCTACA CAGACGGACAGCAATTCGGCCTCGCAAACTGACTCGTCTGCCTCCAACACGACGGACCGCCCCAGCAGCACTACT GACTCTAGCTCGTCGCGCACCAGGTCGTCGACCTCTTCTCGCACCTCGAGCACTGGAGCTGCTGCCGCTGGTCCC GCTGTGGGTGCCTTGGCTGCCATTTTTGCTGCCGCTGTGGCGCTGTAG |
| Gene | >OphauB2|3088 ATGAAGGCCACTTTGATCACTTTCGCCATGGCTGGCCTTGTGGCCGCCCAGCAGGGCCTAGAGGGCGTCCCTGAA TGTGCTGTACGTCTCTGCATTGATGCTGCCCAGCTCCTCCATGTCAAACATGAAGCTTGCTGCTGACTTTGTCGT CTTAGACCTCTTGTATCTCGGAAGGCATCCCCAAGGTGGGCTGCCAGAACGGAGACGTGGCTTGTGCTTGCAAGA ACCAGGAAAAGCTCATGGGCCTCGTTGCTCCTTGTGTCATCAGCAATTGCAAGGGTGACGACATCATAAAGGCTC AGTCGGCCGCCAGCGCTGCCTGCAAGGGTGCCGGTGCCGGCGGCAGCGGCAATGGCAATGGCGACAACAGCTCCG GCTCCGACTCTGCCTCGGGCAGCTCAATGGCCTCGACGTCGATGGCTTCATCGAGCGGCGGCATGGGCGGTGTTG GCGGCGTCGGCGGCGGCATGACGTCGGCCATGACTGGCACCGATTCCATGTCGATGGGCACCATGACGAACAGCG ACATGTCAATGACTACTGACTCATCGGCATCCGACTCTGGCTCTGATAACACTGGCGGTGCCGGTGGCGCTACAC AGACGGACAGCAATTCGGCCTCGCAAACTGACTCGTCTGCCTCCAACACGACGGACCGCCCCAGCAGCACTACTG ACTCTAGCTCGTCGCGCACCAGGTCGTCGACCTCTTCTCGCACCTCGAGCACTGGAGCTGCTGCCGCTGGTCCCG CTGTGGGTGCCTTGGCTGCCATTTTTGCTGCCGCTGTGGCGCTGTAG |