© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|3085 |
| Gene name | |
| Location | Contig_20:111028..111833 |
| Strand | - |
| Gene length (bp) | 805 |
| Transcript length (bp) | 660 |
| Coding sequence length (bp) | 660 |
| Protein length (aa) | 220 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13637 | Ank_4 | Ankyrin repeats (many copies) | 2.1E-05 | 53 | 99 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P53066|YGZ2_YEAST | Ankyrin repeat-containing protein YGL242C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGL242C PE=1 SV=1 | 8 | 137 | 8.0E-21 |
| sp|Q9P7I0|YIT2_SCHPO | Ankyrin repeat-containing protein C105.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC105.02c PE=3 SV=1 | 8 | 137 | 5.0E-16 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|3085 MAADQEHEGASVKERLIEACRSNNTDLLTEILEGRPDDDISALLNDTKTVLGNHLYHEAASRGNYEIIDLLLDQP DFECDPINRAEGDTPLHSVIRWLNAEPPAQRSFGSALVSMMLEAGSSTRIRNRGGLTPLNLVDPANQQLRNLLRQ HEYTALNAGDFINVDDAKKPSAALSSANGRDQHHGHDDQDDSDDAHFSASDDDDRAEWERRKRDKTRNH* |
| Coding | >OphauB2|3085 ATGGCCGCCGACCAAGAGCACGAGGGCGCATCCGTCAAGGAACGCCTCATTGAGGCCTGTCGCAGCAACAACACC GATCTCCTGACCGAGATTCTCGAGGGCCGGCCCGACGACGACATCTCAGCCCTCCTCAACGACACAAAGACGGTC CTGGGCAATCATTTGTACCACGAAGCTGCCTCGCGTGGAAACTACGAAATCATTGACCTTCTCCTCGACCAACCC GACTTTGAATGCGACCCCATCAACCGCGCAGAGGGCGACACTCCCCTCCACTCCGTCATCCGCTGGCTCAATGCC GAACCCCCCGCTCAGCGTTCTTTTGGCTCCGCCCTCGTCTCCATGATGCTCGAAGCCGGCTCCAGCACCCGCATC CGCAACCGCGGCGGCCTCACCCCGCTCAACCTTGTGGATCCGGCAAACCAACAACTGCGTAACCTGCTTCGCCAA CACGAGTATACTGCCCTCAACGCCGGCGACTTTATCAATGTCGATGACGCAAAGAAGCCCAGTGCCGCTCTCTCA TCCGCAAATGGCCGAGACCAACATCATGGCCATGACGACCAAGACGACAGTGACGATGCCCACTTTAGTGCAAGT GACGACGATGACCGCGCAGAGTGGGAGCGTAGGAAAAGGGACAAGACCCGCAACCACTAG |
| Transcript | >OphauB2|3085 ATGGCCGCCGACCAAGAGCACGAGGGCGCATCCGTCAAGGAACGCCTCATTGAGGCCTGTCGCAGCAACAACACC GATCTCCTGACCGAGATTCTCGAGGGCCGGCCCGACGACGACATCTCAGCCCTCCTCAACGACACAAAGACGGTC CTGGGCAATCATTTGTACCACGAAGCTGCCTCGCGTGGAAACTACGAAATCATTGACCTTCTCCTCGACCAACCC GACTTTGAATGCGACCCCATCAACCGCGCAGAGGGCGACACTCCCCTCCACTCCGTCATCCGCTGGCTCAATGCC GAACCCCCCGCTCAGCGTTCTTTTGGCTCCGCCCTCGTCTCCATGATGCTCGAAGCCGGCTCCAGCACCCGCATC CGCAACCGCGGCGGCCTCACCCCGCTCAACCTTGTGGATCCGGCAAACCAACAACTGCGTAACCTGCTTCGCCAA CACGAGTATACTGCCCTCAACGCCGGCGACTTTATCAATGTCGATGACGCAAAGAAGCCCAGTGCCGCTCTCTCA TCCGCAAATGGCCGAGACCAACATCATGGCCATGACGACCAAGACGACAGTGACGATGCCCACTTTAGTGCAAGT GACGACGATGACCGCGCAGAGTGGGAGCGTAGGAAAAGGGACAAGACCCGCAACCACTAG |
| Gene | >OphauB2|3085 ATGGCCGCCGACCAAGAGCACGAGGCAAGTCTCTGCCGACCCCAGGCACTCATCGGCCCCCTTGCCACAAGCGCC CCCGTCCAACTAACGCTGCAAGCTTCCAGGGCGCATCCGTCAAGGAACGCCTCATTGAGGCCTGTCGCAGCAACA ACACCGATCTCCTGACCGAGATTCTCGAGGGCCGGCCCGACGACGACATCTCAGCCCTCCTCAACGACACAAAGA CGGTCCTGGGCAATCATTTGTACCACGAAGCTGCCTCGCGTGGAAACTGTTTGTATTCAGCTATTGCTCGCCGCC AAGCCCCCAACCAAGCCGTCTGACCATGACTTGTGCAGACGAAATCATTGACCTTCTCCTCGACCAACCCGACTT TGAATGCGACCCCATCAACCGCGCAGAGGGCGACACTCCCCTCCACTCCGTCATCCGCTGGCTCAATGCCGAACC CCCCGCTCAGCGTTCTTTTGGCTCCGCCCTCGTCTCCATGATGCTCGAAGCCGGCTCCAGCACCCGCATCCGCAA CCGCGGCGGCCTCACCCCGCTCAACCTTGTGGATCCGGCAAACCAACAACTGCGTAACCTGCTTCGCCAACACGA GTATACTGCCCTCAACGCCGGCGACTTTATCAATGTCGATGACGCAAAGAAGCCCAGTGCCGCTCTCTCATCCGC AAATGGCCGAGACCAACATCATGGCCATGACGACCAAGACGACAGTGACGATGCCCACTTTAGTGCAAGTGACGA CGATGACCGCGCAGAGTGGGAGCGTAGGAAAAGGGACAAGACCCGCAACCACTAG |