Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|3075
Gene name
LocationContig_20:87200..88137
Strand+
Gene length (bp)937
Transcript length (bp)876
Coding sequence length (bp)876
Protein length (aa) 292

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00722 Glyco_hydro_16 Glycosyl hydrolases family 16 2.7E-09 97 253

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P23903|E13B_BACCI Glucan endo-1,3-beta-glucosidase A1 OS=Bacillus circulans GN=glcA PE=1 SV=1 33 267 9.0E-17
sp|P45798|GUB_RHOMR Beta-glucanase OS=Rhodothermus marinus GN=bglA PE=1 SV=1 45 269 1.0E-11
sp|Q9Z3Q2|EGLC_RHIME Endo-1,3-1,4-beta-glycanase EglC OS=Rhizobium meliloti (strain 1021) GN=eglC PE=3 SV=2 8 242 1.0E-10
sp|O33680|EXSH_RHIME Endo-1,3-1,4-beta-glycanase ExsH OS=Rhizobium meliloti (strain 1021) GN=exsH PE=1 SV=1 8 253 3.0E-10

GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Yes
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0003674 molecular_function No
GO:0016787 hydrolase activity No
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0071704 organic substance metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|3075
MPWREHLQRVKDDFNSMVSPRHGATRVAEKTYWQPRFHPEVRVSDEWEAKIGNGPDGWGNQELEHYTADPDNSFH
TADGKLMLCAIANNEAAEAERRYTSARLVSRRTLGRDRGVLTASIAAPCAPGIWPAFWLLPQEPFSWPGDGEIDI
AETWNGDCEMRSCLHWGPHQEGDKHRVMGTHIADLASRSVRYDFAWDQPGGEPGQGRLLWYIDGKPVMKADVPQG
TRPMREMAILLNVAMGGNVCGGKAPSDGKYHMVVDMLCLAEELEAGGWKRFDCDWNSSSTPWGNTY*
Coding >OphauB2|3075
ATGCCGTGGAGAGAGCATTTGCAGCGCGTCAAGGACGACTTCAACAGCATGGTGTCGCCACGACATGGTGCGACG
CGGGTGGCGGAAAAGACGTACTGGCAGCCGCGCTTCCACCCAGAGGTGAGGGTGAGCGACGAGTGGGAGGCCAAG
ATTGGTAACGGGCCGGATGGCTGGGGAAACCAAGAACTGGAACATTACACGGCAGACCCAGACAATTCTTTCCAC
ACGGCGGATGGGAAGCTGATGCTCTGCGCCATTGCCAATAACGAGGCAGCCGAGGCGGAGAGGCGGTACACGTCG
GCACGGCTCGTCAGCCGGCGCACGCTGGGTCGAGACCGCGGCGTCTTGACAGCCTCGATTGCGGCGCCCTGTGCC
CCAGGCATCTGGCCTGCCTTTTGGCTTCTGCCACAGGAGCCCTTTTCGTGGCCCGGTGACGGCGAAATCGACATT
GCCGAGACGTGGAACGGCGACTGCGAGATGCGGTCCTGCCTTCACTGGGGCCCTCACCAAGAGGGCGACAAGCAC
CGCGTCATGGGCACGCACATTGCCGACCTGGCCAGCCGCTCCGTGCGCTACGACTTTGCCTGGGACCAGCCTGGC
GGAGAGCCGGGTCAGGGGCGCCTGCTATGGTATATCGACGGCAAGCCCGTCATGAAGGCCGACGTGCCGCAGGGG
ACGCGCCCCATGCGAGAAATGGCCATTCTGCTCAACGTGGCCATGGGAGGCAACGTCTGCGGCGGCAAGGCCCCG
TCCGACGGCAAATACCACATGGTGGTTGATATGCTGTGTCTGGCCGAAGAGCTCGAGGCCGGAGGGTGGAAGCGC
TTTGACTGCGACTGGAACAGCTCCAGTACGCCATGGGGAAATACTTATTGA
Transcript >OphauB2|3075
ATGCCGTGGAGAGAGCATTTGCAGCGCGTCAAGGACGACTTCAACAGCATGGTGTCGCCACGACATGGTGCGACG
CGGGTGGCGGAAAAGACGTACTGGCAGCCGCGCTTCCACCCAGAGGTGAGGGTGAGCGACGAGTGGGAGGCCAAG
ATTGGTAACGGGCCGGATGGCTGGGGAAACCAAGAACTGGAACATTACACGGCAGACCCAGACAATTCTTTCCAC
ACGGCGGATGGGAAGCTGATGCTCTGCGCCATTGCCAATAACGAGGCAGCCGAGGCGGAGAGGCGGTACACGTCG
GCACGGCTCGTCAGCCGGCGCACGCTGGGTCGAGACCGCGGCGTCTTGACAGCCTCGATTGCGGCGCCCTGTGCC
CCAGGCATCTGGCCTGCCTTTTGGCTTCTGCCACAGGAGCCCTTTTCGTGGCCCGGTGACGGCGAAATCGACATT
GCCGAGACGTGGAACGGCGACTGCGAGATGCGGTCCTGCCTTCACTGGGGCCCTCACCAAGAGGGCGACAAGCAC
CGCGTCATGGGCACGCACATTGCCGACCTGGCCAGCCGCTCCGTGCGCTACGACTTTGCCTGGGACCAGCCTGGC
GGAGAGCCGGGTCAGGGGCGCCTGCTATGGTATATCGACGGCAAGCCCGTCATGAAGGCCGACGTGCCGCAGGGG
ACGCGCCCCATGCGAGAAATGGCCATTCTGCTCAACGTGGCCATGGGAGGCAACGTCTGCGGCGGCAAGGCCCCG
TCCGACGGCAAATACCACATGGTGGTTGATATGCTGTGTCTGGCCGAAGAGCTCGAGGCCGGAGGGTGGAAGCGC
TTTGACTGCGACTGGAACAGCTCCAGTACGCCATGGGGAAATACTTATTGA
Gene >OphauB2|3075
ATGCCGTGGAGAGAGCATTTGCAGCGCGTCAAGGACGACTTCAACAGCATGGTGTCGCCACGACATGGTGCGACG
CGGGTGGCGGAAAAGACGTACTGGCAGCCGCGCTTCCACCCAGAGGTGAGGGTGAGCGACGAGTGGGAGGCCAAG
ATTGGTAACGGGCCGGATGGCTGGGGAAACCAAGAACTGGAACATTACACGGCAGACCCAGACAATTCTTTCCAG
TGGGTTGCTAGCGAGGCGCAAAGGAGTTGCTGATGCTGATGATGGGGCCGGCTGTTGCAGCACGGCGGATGGGAA
GCTGATGCTCTGCGCCATTGCCAATAACGAGGCAGCCGAGGCGGAGAGGCGGTACACGTCGGCACGGCTCGTCAG
CCGGCGCACGCTGGGTCGAGACCGCGGCGTCTTGACAGCCTCGATTGCGGCGCCCTGTGCCCCAGGCATCTGGCC
TGCCTTTTGGCTTCTGCCACAGGAGCCCTTTTCGTGGCCCGGTGACGGCGAAATCGACATTGCCGAGACGTGGAA
CGGCGACTGCGAGATGCGGTCCTGCCTTCACTGGGGCCCTCACCAAGAGGGCGACAAGCACCGCGTCATGGGCAC
GCACATTGCCGACCTGGCCAGCCGCTCCGTGCGCTACGACTTTGCCTGGGACCAGCCTGGCGGAGAGCCGGGTCA
GGGGCGCCTGCTATGGTATATCGACGGCAAGCCCGTCATGAAGGCCGACGTGCCGCAGGGGACGCGCCCCATGCG
AGAAATGGCCATTCTGCTCAACGTGGCCATGGGAGGCAACGTCTGCGGCGGCAAGGCCCCGTCCGACGGCAAATA
CCACATGGTGGTTGATATGCTGTGTCTGGCCGAAGAGCTCGAGGCCGGAGGGTGGAAGCGCTTTGACTGCGACTG
GAACAGCTCCAGTACGCCATGGGGAAATACTTATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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