Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|3070
Gene name
LocationContig_20:62018..62966
Strand-
Gene length (bp)948
Transcript length (bp)948
Coding sequence length (bp)948
Protein length (aa) 316

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04478 Mid2 Mid2 like cell wall stress sensor 4.3E-06 205 249

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

Domain # Start End Length
1 233 255 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|3070
MHSHRLIHLLALAVSLLCVARASWLNINREPPIVARQLMNPLNNPAAAADSSSDSDNKPTRPSVPAVTSAPAQPP
SSPSSTPAPSRTTSEEPSSSAESTPPPSPSSTSSSSNRQQSSSSTSETPTQPASSQSVTPTQPASSSSSSSQSES
QSQPSQTESSSTQSSSTTQGSTGGSSKPTATPVVVTSVFVVTQTNSDGSQSLMTSTSLTTSTPSLNSNESSETSG
MSSRTRNTVIGVVVGVGGAIVLGALGLVAWRVWGRKKQSEENDGLMSYNVGPTGVEKSEPGSSSGPQRSPFQATL
ENYHQPTHVNASSNF*
Coding >OphauB2|3070
ATGCACTCCCATCGCCTCATTCACCTGCTTGCCCTGGCAGTCTCCCTGCTCTGCGTTGCGCGCGCCTCGTGGCTC
AACATCAACCGCGAGCCACCCATTGTTGCCAGACAGCTTATGAACCCGCTCAACAATCCTGCTGCCGCCGCCGAC
TCGAGCTCTGATAGTGACAATAAGCCAACTCGTCCCTCAGTACCTGCCGTCACAAGCGCGCCTGCCCAACCACCC
TCATCGCCTTCTTCTACCCCGGCCCCGTCACGCACCACTTCTGAGGAGCCATCGTCTTCTGCCGAGAGCACGCCG
CCGCCATCGCCGTCGTCGACATCCTCATCCTCCAACCGCCAGCAGTCTTCTTCAAGCACCTCCGAGACACCGACA
CAGCCTGCCTCGTCCCAGTCGGTTACTCCAACCCAGCCCGCCTCGTCGAGCTCCTCGAGCAGCCAATCCGAGTCT
CAGTCACAACCAAGCCAGACTGAATCTTCCTCCACCCAATCAAGCTCTACTACCCAAGGGAGCACAGGCGGCTCA
TCCAAACCCACGGCAACACCTGTTGTCGTGACGTCGGTCTTCGTCGTTACCCAGACCAATAGCGATGGCTCTCAA
AGCCTCATGACCTCGACGTCTCTCACAACATCTACCCCAAGTCTCAACTCCAACGAGTCGTCTGAAACTTCGGGA
ATGTCTAGCCGCACTCGCAACACCGTCATTGGTGTTGTCGTTGGCGTTGGAGGCGCCATTGTTCTCGGCGCCTTG
GGCTTGGTGGCCTGGCGTGTATGGGGTCGCAAGAAGCAGTCAGAAGAGAACGATGGACTCATGTCATACAATGTT
GGTCCTACTGGCGTCGAAAAATCGGAGCCAGGCAGTTCTTCAGGTCCTCAGCGAAGTCCTTTCCAGGCTACCTTG
GAAAATTATCACCAGCCCACACACGTCAACGCCTCGTCCAATTTTTAA
Transcript >OphauB2|3070
ATGCACTCCCATCGCCTCATTCACCTGCTTGCCCTGGCAGTCTCCCTGCTCTGCGTTGCGCGCGCCTCGTGGCTC
AACATCAACCGCGAGCCACCCATTGTTGCCAGACAGCTTATGAACCCGCTCAACAATCCTGCTGCCGCCGCCGAC
TCGAGCTCTGATAGTGACAATAAGCCAACTCGTCCCTCAGTACCTGCCGTCACAAGCGCGCCTGCCCAACCACCC
TCATCGCCTTCTTCTACCCCGGCCCCGTCACGCACCACTTCTGAGGAGCCATCGTCTTCTGCCGAGAGCACGCCG
CCGCCATCGCCGTCGTCGACATCCTCATCCTCCAACCGCCAGCAGTCTTCTTCAAGCACCTCCGAGACACCGACA
CAGCCTGCCTCGTCCCAGTCGGTTACTCCAACCCAGCCCGCCTCGTCGAGCTCCTCGAGCAGCCAATCCGAGTCT
CAGTCACAACCAAGCCAGACTGAATCTTCCTCCACCCAATCAAGCTCTACTACCCAAGGGAGCACAGGCGGCTCA
TCCAAACCCACGGCAACACCTGTTGTCGTGACGTCGGTCTTCGTCGTTACCCAGACCAATAGCGATGGCTCTCAA
AGCCTCATGACCTCGACGTCTCTCACAACATCTACCCCAAGTCTCAACTCCAACGAGTCGTCTGAAACTTCGGGA
ATGTCTAGCCGCACTCGCAACACCGTCATTGGTGTTGTCGTTGGCGTTGGAGGCGCCATTGTTCTCGGCGCCTTG
GGCTTGGTGGCCTGGCGTGTATGGGGTCGCAAGAAGCAGTCAGAAGAGAACGATGGACTCATGTCATACAATGTT
GGTCCTACTGGCGTCGAAAAATCGGAGCCAGGCAGTTCTTCAGGTCCTCAGCGAAGTCCTTTCCAGGCTACCTTG
GAAAATTATCACCAGCCCACACACGTCAACGCCTCGTCCAATTTTTAA
Gene >OphauB2|3070
ATGCACTCCCATCGCCTCATTCACCTGCTTGCCCTGGCAGTCTCCCTGCTCTGCGTTGCGCGCGCCTCGTGGCTC
AACATCAACCGCGAGCCACCCATTGTTGCCAGACAGCTTATGAACCCGCTCAACAATCCTGCTGCCGCCGCCGAC
TCGAGCTCTGATAGTGACAATAAGCCAACTCGTCCCTCAGTACCTGCCGTCACAAGCGCGCCTGCCCAACCACCC
TCATCGCCTTCTTCTACCCCGGCCCCGTCACGCACCACTTCTGAGGAGCCATCGTCTTCTGCCGAGAGCACGCCG
CCGCCATCGCCGTCGTCGACATCCTCATCCTCCAACCGCCAGCAGTCTTCTTCAAGCACCTCCGAGACACCGACA
CAGCCTGCCTCGTCCCAGTCGGTTACTCCAACCCAGCCCGCCTCGTCGAGCTCCTCGAGCAGCCAATCCGAGTCT
CAGTCACAACCAAGCCAGACTGAATCTTCCTCCACCCAATCAAGCTCTACTACCCAAGGGAGCACAGGCGGCTCA
TCCAAACCCACGGCAACACCTGTTGTCGTGACGTCGGTCTTCGTCGTTACCCAGACCAATAGCGATGGCTCTCAA
AGCCTCATGACCTCGACGTCTCTCACAACATCTACCCCAAGTCTCAACTCCAACGAGTCGTCTGAAACTTCGGGA
ATGTCTAGCCGCACTCGCAACACCGTCATTGGTGTTGTCGTTGGCGTTGGAGGCGCCATTGTTCTCGGCGCCTTG
GGCTTGGTGGCCTGGCGTGTATGGGGTCGCAAGAAGCAGTCAGAAGAGAACGATGGACTCATGTCATACAATGTT
GGTCCTACTGGCGTCGAAAAATCGGAGCCAGGCAGTTCTTCAGGTCCTCAGCGAAGTCCTTTCCAGGCTACCTTG
GAAAATTATCACCAGCCCACACACGTCAACGCCTCGTCCAATTTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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