© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|3021 |
| Gene name | |
| Location | Contig_2:314626..316632 |
| Strand | + |
| Gene length (bp) | 2006 |
| Transcript length (bp) | 1881 |
| Coding sequence length (bp) | 1881 |
| Protein length (aa) | 627 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03151 | TPT | Triose-phosphate Transporter family | 3.5E-20 | 220 | 535 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10354|YDB1_SCHPO | Uncharacterized transporter C22E12.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22E12.01 PE=3 SV=2 | 197 | 541 | 1.0E-74 |
| sp|Q8H184|PT106_ARATH | Probable sugar phosphate/phosphate translocator At1g06470 OS=Arabidopsis thaliana GN=At1g06470 PE=2 SV=1 | 154 | 576 | 2.0E-53 |
| sp|Q03697|YMD8_YEAST | Putative nucleotide-sugar transporter YMD8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMD8 PE=1 SV=1 | 222 | 551 | 8.0E-45 |
| sp|Q9NQQ7|S35C2_HUMAN | Solute carrier family 35 member C2 OS=Homo sapiens GN=SLC35C2 PE=1 SV=2 | 223 | 546 | 9.0E-42 |
| sp|Q8VCX2|S35C2_MOUSE | Solute carrier family 35 member C2 OS=Mus musculus GN=Slc35c2 PE=1 SV=1 | 223 | 575 | 3.0E-40 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10354|YDB1_SCHPO | Uncharacterized transporter C22E12.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22E12.01 PE=3 SV=2 | 197 | 541 | 1.0E-74 |
| sp|Q8H184|PT106_ARATH | Probable sugar phosphate/phosphate translocator At1g06470 OS=Arabidopsis thaliana GN=At1g06470 PE=2 SV=1 | 154 | 576 | 2.0E-53 |
| sp|Q03697|YMD8_YEAST | Putative nucleotide-sugar transporter YMD8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMD8 PE=1 SV=1 | 222 | 551 | 8.0E-45 |
| sp|Q9NQQ7|S35C2_HUMAN | Solute carrier family 35 member C2 OS=Homo sapiens GN=SLC35C2 PE=1 SV=2 | 223 | 546 | 9.0E-42 |
| sp|Q8VCX2|S35C2_MOUSE | Solute carrier family 35 member C2 OS=Mus musculus GN=Slc35c2 PE=1 SV=1 | 223 | 575 | 3.0E-40 |
| sp|Q9SKJ7|PT225_ARATH | Probable sugar phosphate/phosphate translocator At2g25520 OS=Arabidopsis thaliana GN=At2g25520 PE=1 SV=1 | 212 | 556 | 8.0E-22 |
| sp|Q9LRP2|PT317_ARATH | Probable sugar phosphate/phosphate translocator At3g17430 OS=Arabidopsis thaliana GN=At3g17430 PE=1 SV=1 | 233 | 543 | 2.0E-21 |
| sp|Q3E6T0|PT525_ARATH | Probable sugar phosphate/phosphate translocator At5g25400 OS=Arabidopsis thaliana GN=At5g25400 PE=2 SV=1 | 210 | 556 | 1.0E-20 |
| sp|Q9SUV2|PT432_ARATH | Probable sugar phosphate/phosphate translocator At4g32390 OS=Arabidopsis thaliana GN=At4g32390 PE=3 SV=1 | 212 | 556 | 1.0E-20 |
| sp|Q9C8M1|PT153_ARATH | Probable sugar phosphate/phosphate translocator At1g53660 OS=Arabidopsis thaliana GN=At1g53660 PE=3 SV=2 | 223 | 535 | 2.0E-18 |
| sp|Q9LFN3|PT511_ARATH | Probable sugar phosphate/phosphate translocator At5g11230 OS=Arabidopsis thaliana GN=At5g11230 PE=2 SV=1 | 210 | 542 | 4.0E-18 |
| sp|Q94EI9|PT314_ARATH | Probable sugar phosphate/phosphate translocator At3g14410 OS=Arabidopsis thaliana GN=At3g14410 PE=2 SV=1 | 222 | 567 | 4.0E-17 |
| sp|Q9C521|UGAL1_ARATH | UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1 PE=2 SV=1 | 223 | 538 | 4.0E-16 |
| sp|Q9LNH5|PT148_ARATH | Probable sugar phosphate/phosphate translocator At1g48230 OS=Arabidopsis thaliana GN=At1g48230 PE=2 SV=2 | 233 | 543 | 6.0E-16 |
| sp|Q9SFE9|GONS5_ARATH | GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5 PE=2 SV=1 | 223 | 538 | 4.0E-14 |
| sp|Q9SS40|PT310_ARATH | Probable sugar phosphate/phosphate translocator At3g10290 OS=Arabidopsis thaliana GN=At3g10290 PE=3 SV=1 | 223 | 538 | 3.0E-11 |
| sp|Q6DBP3|PT505_ARATH | Probable sugar phosphate/phosphate translocator At5g05820 OS=Arabidopsis thaliana GN=At5g05820 PE=2 SV=1 | 215 | 538 | 3.0E-09 |
| sp|Q9FYE5|PT504_ARATH | Probable sugar phosphate/phosphate translocator At5g04160 OS=Arabidopsis thaliana GN=At5g04160 PE=2 SV=1 | 223 | 538 | 7.0E-09 |
| sp|Q5XF09|PT311_ARATH | Probable sugar phosphate/phosphate translocator At3g11320 OS=Arabidopsis thaliana GN=At3g11320 PE=2 SV=1 | 226 | 538 | 2.0E-07 |
| sp|Q9LDH3|PT112_ARATH | Probable sugar phosphate/phosphate translocator At1g12500 OS=Arabidopsis thaliana GN=At1g12500 PE=1 SV=1 | 226 | 535 | 2.0E-07 |
| sp|Q8C811|S35E2_MOUSE | Solute carrier family 35 member E2 OS=Mus musculus GN=Slc35e2 PE=2 SV=1 | 222 | 551 | 1.0E-06 |
| sp|Q84QU8|PPT2_ORYSJ | Phosphoenolpyruvate/phosphate translocator 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT2 PE=2 SV=1 | 203 | 546 | 3.0E-06 |
| sp|Q8RXN3|PPT1_ARATH | Phosphoenolpyruvate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=PPT1 PE=1 SV=1 | 192 | 541 | 4.0E-06 |
| sp|P52178|TPT2_BRAOB | Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1 | 192 | 541 | 5.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 216 | 235 | 19 |
| 2 | 248 | 270 | 22 |
| 3 | 331 | 353 | 22 |
| 4 | 360 | 379 | 19 |
| 5 | 389 | 411 | 22 |
| 6 | 423 | 445 | 22 |
| 7 | 460 | 482 | 22 |
| 8 | 489 | 511 | 22 |
| 9 | 516 | 537 | 21 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|3021 MPAATSHRGSSASGLPSPLSLSSSCPPSPSHPSSARSPALLAPVAESPAPQDASAALAAPLAVAPSAASSSALIS SASSPSSAPAARHSACRRDGIEMEPIMGHRRRTSSLINPTAANPGPVGHRTRLSLSIPQDAPPSDSPSARPGDSA KDEASPESCSDEDLHDDEETGLARKDRSRRQKKRRRNTLLHNRIAQEKKPSPDECKEADKDVLTRLLTNGCFILL WYFFSLSISLYNKWMFDRDRLNFAFPLFTTSTHMLVQFLLAGLALYFVPSLRPPTDAHNSDGGRSRHETELNNTA MSKLFYLTRIGPCGAATGLDIGLGNASLKFISLTFYTMCKSSSLAFVLLFAFMFRLETPTWRLVAIIAIMTLGVV LMVFGEVEFKFGGFFLVISAAFFSGFRWGLTQILLLRNPATSNPFSSIFYLSPVMFVTLISLAIPVEGFGPLWQG LKTLSNEWGVVMTPLFLLFPGCIAFLMTASEFALLQRTSVVTLSIAGIFKEVVTISAASVVFEDKLTFINLVGLL TTMAAIIAYNYVKITKMRQDAQVTVHGRHAELVPASPSSTNSIGSDVDVDEGLEETAGLLQQGPEMAQPLVTSDG DIQPNLLVPNTPSMDERRDTKPGHEE* |
| Coding | >OphauB2|3021 ATGCCCGCTGCTACCAGTCATCGTGGCTCGTCCGCCTCTGGCCTGCCCTCTCCTCTGTCTTTGTCTTCTTCCTGT CCCCCGTCGCCTTCGCATCCCTCCTCTGCCCGCTCTCCTGCTCTCCTCGCGCCTGTTGCCGAATCGCCTGCTCCC CAAGACGCCTCTGCTGCTCTCGCCGCTCCTCTCGCCGTCGCCCCATCTGCCGCCTCCTCCTCGGCCCTCATCTCT TCGGCTTCCTCGCCGTCGTCTGCCCCGGCTGCGCGTCATTCCGCCTGCCGACGCGACGGCATCGAGATGGAGCCC ATCATGGGCCATCGCCGGCGCACCAGCAGTCTCATCAACCCCACCGCTGCCAACCCGGGCCCCGTCGGCCACCGC ACCCGACTCTCTCTCAGCATCCCCCAAGACGCCCCCCCGTCGGACAGTCCCAGTGCCCGTCCAGGCGACTCGGCC AAGGACGAAGCCTCGCCCGAGAGCTGCAGCGATGAGGACCTCCACGACGATGAAGAGACGGGCTTGGCCCGCAAG GACCGCAGTCGCAGGCAAAAGAAGCGCCGGCGAAACACCCTGCTGCACAATCGCATCGCCCAGGAGAAGAAGCCC TCGCCCGACGAGTGCAAAGAGGCTGACAAGGACGTCTTGACAAGACTGCTTACCAATGGCTGCTTCATCCTGCTG TGGTACTTTTTCTCCTTGTCCATCTCATTATACAACAAGTGGATGTTTGATCGTGATCGCCTCAACTTTGCTTTT CCCCTCTTCACCACTTCTACCCACATGCTCGTCCAGTTTCTTCTTGCCGGCCTCGCTCTCTACTTTGTGCCTTCG CTGCGGCCGCCCACCGACGCCCACAACTCGGATGGCGGTCGCTCGCGCCACGAAACCGAGCTGAACAATACCGCC ATGTCCAAGCTCTTTTACTTGACGCGCATTGGCCCCTGTGGTGCTGCCACGGGCCTCGACATTGGTCTGGGCAAT GCCTCACTCAAATTCATCAGCCTCACCTTTTACACAATGTGCAAATCCTCCTCTCTCGCCTTTGTCTTGCTCTTC GCCTTCATGTTTCGTCTCGAAACTCCCACCTGGCGCCTTGTTGCCATCATCGCCATCATGACCTTGGGCGTTGTC CTCATGGTCTTTGGCGAGGTCGAGTTCAAGTTTGGTGGCTTCTTCCTCGTCATCTCGGCTGCCTTTTTCTCTGGC TTTCGTTGGGGCCTCACTCAGATTTTGCTCTTGCGCAATCCTGCTACTTCAAACCCATTTTCTAGCATATTTTAC TTGTCCCCTGTCATGTTTGTGACTTTGATATCCCTTGCCATTCCCGTCGAGGGCTTTGGTCCCTTGTGGCAAGGC CTCAAGACGCTCAGCAACGAATGGGGCGTCGTCATGACGCCTCTCTTCCTCCTCTTTCCTGGCTGTATTGCCTTT CTCATGACGGCCTCCGAGTTTGCTCTGCTGCAACGGACCTCGGTTGTAACACTGTCGATAGCCGGCATCTTCAAG GAAGTCGTAACCATCTCAGCCGCGTCGGTCGTTTTTGAGGACAAGTTGACCTTTATAAATCTCGTTGGCCTATTG ACAACAATGGCCGCCATTATCGCCTACAACTACGTCAAAATTACCAAGATGAGGCAAGATGCTCAGGTTACTGTG CATGGCCGCCATGCCGAACTGGTGCCCGCATCACCCTCGAGCACTAATAGCATCGGCAGCGACGTTGACGTGGAC GAAGGCCTCGAAGAGACGGCGGGCCTTTTGCAACAAGGACCCGAAATGGCACAGCCTCTTGTAACCTCTGACGGC GATATTCAGCCCAATCTGCTTGTGCCAAATACTCCATCCATGGACGAGCGCAGAGACACCAAGCCAGGGCACGAA GAGTAG |
| Transcript | >OphauB2|3021 ATGCCCGCTGCTACCAGTCATCGTGGCTCGTCCGCCTCTGGCCTGCCCTCTCCTCTGTCTTTGTCTTCTTCCTGT CCCCCGTCGCCTTCGCATCCCTCCTCTGCCCGCTCTCCTGCTCTCCTCGCGCCTGTTGCCGAATCGCCTGCTCCC CAAGACGCCTCTGCTGCTCTCGCCGCTCCTCTCGCCGTCGCCCCATCTGCCGCCTCCTCCTCGGCCCTCATCTCT TCGGCTTCCTCGCCGTCGTCTGCCCCGGCTGCGCGTCATTCCGCCTGCCGACGCGACGGCATCGAGATGGAGCCC ATCATGGGCCATCGCCGGCGCACCAGCAGTCTCATCAACCCCACCGCTGCCAACCCGGGCCCCGTCGGCCACCGC ACCCGACTCTCTCTCAGCATCCCCCAAGACGCCCCCCCGTCGGACAGTCCCAGTGCCCGTCCAGGCGACTCGGCC AAGGACGAAGCCTCGCCCGAGAGCTGCAGCGATGAGGACCTCCACGACGATGAAGAGACGGGCTTGGCCCGCAAG GACCGCAGTCGCAGGCAAAAGAAGCGCCGGCGAAACACCCTGCTGCACAATCGCATCGCCCAGGAGAAGAAGCCC TCGCCCGACGAGTGCAAAGAGGCTGACAAGGACGTCTTGACAAGACTGCTTACCAATGGCTGCTTCATCCTGCTG TGGTACTTTTTCTCCTTGTCCATCTCATTATACAACAAGTGGATGTTTGATCGTGATCGCCTCAACTTTGCTTTT CCCCTCTTCACCACTTCTACCCACATGCTCGTCCAGTTTCTTCTTGCCGGCCTCGCTCTCTACTTTGTGCCTTCG CTGCGGCCGCCCACCGACGCCCACAACTCGGATGGCGGTCGCTCGCGCCACGAAACCGAGCTGAACAATACCGCC ATGTCCAAGCTCTTTTACTTGACGCGCATTGGCCCCTGTGGTGCTGCCACGGGCCTCGACATTGGTCTGGGCAAT GCCTCACTCAAATTCATCAGCCTCACCTTTTACACAATGTGCAAATCCTCCTCTCTCGCCTTTGTCTTGCTCTTC GCCTTCATGTTTCGTCTCGAAACTCCCACCTGGCGCCTTGTTGCCATCATCGCCATCATGACCTTGGGCGTTGTC CTCATGGTCTTTGGCGAGGTCGAGTTCAAGTTTGGTGGCTTCTTCCTCGTCATCTCGGCTGCCTTTTTCTCTGGC TTTCGTTGGGGCCTCACTCAGATTTTGCTCTTGCGCAATCCTGCTACTTCAAACCCATTTTCTAGCATATTTTAC TTGTCCCCTGTCATGTTTGTGACTTTGATATCCCTTGCCATTCCCGTCGAGGGCTTTGGTCCCTTGTGGCAAGGC CTCAAGACGCTCAGCAACGAATGGGGCGTCGTCATGACGCCTCTCTTCCTCCTCTTTCCTGGCTGTATTGCCTTT CTCATGACGGCCTCCGAGTTTGCTCTGCTGCAACGGACCTCGGTTGTAACACTGTCGATAGCCGGCATCTTCAAG GAAGTCGTAACCATCTCAGCCGCGTCGGTCGTTTTTGAGGACAAGTTGACCTTTATAAATCTCGTTGGCCTATTG ACAACAATGGCCGCCATTATCGCCTACAACTACGTCAAAATTACCAAGATGAGGCAAGATGCTCAGGTTACTGTG CATGGCCGCCATGCCGAACTGGTGCCCGCATCACCCTCGAGCACTAATAGCATCGGCAGCGACGTTGACGTGGAC GAAGGCCTCGAAGAGACGGCGGGCCTTTTGCAACAAGGACCCGAAATGGCACAGCCTCTTGTAACCTCTGACGGC GATATTCAGCCCAATCTGCTTGTGCCAAATACTCCATCCATGGACGAGCGCAGAGACACCAAGCCAGGGCACGAA GAGTAG |
| Gene | >OphauB2|3021 ATGCCCGCTGCTACCAGTCATCGTGGCTCGTCCGCCTCTGGCCTGCCCTCTCCTCTGTCTTTGTCTTCTTCCTGT CCCCCGTCGCCTTCGCATCCCTCCTCTGCCCGCTCTCCTGCTCTCCTCGCGCCTGTTGCCGAATCGCCTGCTCCC CAAGACGCCTCTGCTGCTCTCGCCGCTCCTCTCGCCGTCGCCCCATCTGCCGCCTCCTCCTCGGCCCTCATCTCT TCGGCTTCCTCGCCGTCGTCTGCCCCGGCTGCGCGTCATTCCGCCTGCCGACGCGACGGCATCGAGATGGAGCCC ATCATGGGCCATCGCCGGCGCACCAGCAGTCTCATCAACCCCACCGCTGCCAACCCGGGCCCCGTCGGCCACCGC ACCCGACTCTCTCTCAGCATCCCCCAAGACGCCCCCCCGTCGGACAGTCCCAGTGCCCGTCCAGGCGACTCGGCC AAGGACGAAGCCTCGCCCGAGAGCTGCAGCGATGAGGACCTCCACGACGATGAAGAGACGGGCTTGGCCCGCAAG GACCGCAGTCGCAGGCAAAAGAAGCGCCGGCGAAACACCCTGCTGCACAATCGCATCGCCCAGGAGAAGAAGCCC TCGCCCGACGAGTGCAAAGAGGCTGACAAGGACGTCTTGACAAGACTGCTTACCAATGGCTGCTTCATCCTGCTG TGGTACTTTTTCTCCTTGTCCATCTCATTAGTAGGTGCCTGCATGCTTGGTGCTTGTTGCAAGGCCCCCTGCGCT AACTCGCCCTCTTTGTCCCAGTACAACAAGTGGATGTTTGATCGTGATCGCCTCAACTTTGCTTTTCCCCTCTTC ACCACTTCTACCCACATGCTCGTCCAGTTTCTTCTTGCCGGCCTCGCTCTCTACTTTGTGCCTTCGCTGCGGCCG CCCACCGACGCCCACAACTCGGATGGCGGTCGCTCGCGCCACGAAACCGAGCTGAACAATACCGCCATGTCCAAG CTCTTTTACTTGACGCGCATTGGCCCCTGTGGTGCTGCCACGGGCCTCGACATTGGTCTGGGCAATGCCTCACTC AAATTCATCAGCCTCACCTTTTACAGTAAGACCATGGCTCCATTTCCCTCTCCATGGCCTCCTCCTAACCATTTA TACCAATAGCAATGTGCAAATCCTCCTCTCTCGCCTTTGTCTTGCTCTTCGCCTTCATGTTTCGTCTCGAAACTC CCACCTGGCGCCTTGTTGCCATCATCGCCATCATGACCTTGGGCGTTGTCCTCATGGTCTTTGGCGAGGTCGAGT TCAAGTTTGGTGGCTTCTTCCTCGTCATCTCGGCTGCCTTTTTCTCTGGCTTTCGTTGGGGCCTCACTCAGATTT TGCTCTTGCGCAATCCTGCTACTTCAAACCCATTTTCTAGCATATTTTACTTGTCCCCTGTCATGTTTGTGACTT TGATATCCCTTGCCATTCCCGTCGAGGGCTTTGGTCCCTTGTGGCAAGGCCTCAAGACGCTCAGCAACGAATGGG GCGTCGTCATGACGCCTCTCTTCCTCCTCTTTCCTGGCTGTATTGCCTTTCTCATGACGGCCTCCGAGTTTGCTC TGCTGCAACGGACCTCGGTTGTAACACTGTCGATAGCCGGCATCTTCAAGGAAGTCGTAACCATCTCAGCCGCGT CGGTCGTTTTTGAGGACAAGTTGACCTTTATAAATCTCGTTGGCCTATTGACAACAATGGCCGCCATTATCGCCT ACAACTACGTCAAAATTACCAAGATGAGGCAAGATGCTCAGGTTACTGTGCATGGCCGCCATGCCGAACTGGTGC CCGCATCACCCTCGAGCACTAATAGCATCGGCAGCGACGTTGACGTGGACGAAGGCCTCGAAGAGACGGCGGGCC TTTTGCAACAAGGACCCGAAATGGCACAGCCTCTTGTAACCTCTGACGGCGATATTCAGCCCAATCTGCTTGTGC CAAATACTCCATCCATGGACGAGCGCAGAGACACCAAGCCAGGGCACGAAGAGTAG |