Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|2985
Gene name
LocationContig_2:223333..223807
Strand+
Gene length (bp)474
Transcript length (bp)474
Coding sequence length (bp)474
Protein length (aa) 158

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12716 Apq12 Nuclear pore assembly and biogenesis 1.2E-06 56 106

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 57 79 22
2 86 108 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6365
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6043
Ophiocordyceps australis map64 (Brazil) OphauB2|2985 (this protein)
Ophiocordyceps camponoti-floridani Ophcf2|00231
Ophiocordyceps camponoti-rufipedis Ophun1|2914
Ophiocordyceps kimflemingae Ophio5|7014

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|2985
MDLVPTILRMAVELLPISAAVQLFSVASEIQNHARDTVYMLSETEGDYGGNSSGSAVPLLAGLTTLAIAFLVVVW
TVRLIIFWTRLALRVALWTALLTGCALIWTRGVGPCLRDAVIVAAKALGFLMVVKDVCIEAYIRYNERESLAQTG
ATGNWVS*
Coding >OphauB2|2985
ATGGACCTGGTTCCCACCATCTTGCGCATGGCTGTCGAGCTTCTCCCCATTTCAGCAGCGGTGCAGCTGTTCAGC
GTCGCATCAGAGATTCAAAATCACGCACGCGACACCGTCTACATGTTGTCAGAGACTGAAGGCGACTATGGTGGC
AACAGCAGTGGCTCGGCTGTGCCGCTGCTTGCTGGACTCACAACCCTGGCCATTGCCTTCTTGGTCGTGGTTTGG
ACGGTGCGCCTCATTATCTTTTGGACGCGTCTTGCTTTGCGCGTCGCGCTGTGGACTGCTCTATTGACGGGCTGC
GCTCTCATCTGGACACGTGGTGTGGGACCTTGTCTGCGCGACGCTGTTATTGTGGCGGCAAAAGCCCTGGGCTTC
TTAATGGTGGTCAAGGATGTCTGCATCGAGGCCTACATTCGCTACAACGAACGGGAGAGTTTGGCACAAACAGGC
GCCACAGGCAACTGGGTCTCGTAA
Transcript >OphauB2|2985
ATGGACCTGGTTCCCACCATCTTGCGCATGGCTGTCGAGCTTCTCCCCATTTCAGCAGCGGTGCAGCTGTTCAGC
GTCGCATCAGAGATTCAAAATCACGCACGCGACACCGTCTACATGTTGTCAGAGACTGAAGGCGACTATGGTGGC
AACAGCAGTGGCTCGGCTGTGCCGCTGCTTGCTGGACTCACAACCCTGGCCATTGCCTTCTTGGTCGTGGTTTGG
ACGGTGCGCCTCATTATCTTTTGGACGCGTCTTGCTTTGCGCGTCGCGCTGTGGACTGCTCTATTGACGGGCTGC
GCTCTCATCTGGACACGTGGTGTGGGACCTTGTCTGCGCGACGCTGTTATTGTGGCGGCAAAAGCCCTGGGCTTC
TTAATGGTGGTCAAGGATGTCTGCATCGAGGCCTACATTCGCTACAACGAACGGGAGAGTTTGGCACAAACAGGC
GCCACAGGCAACTGGGTCTCGTAA
Gene >OphauB2|2985
ATGGACCTGGTTCCCACCATCTTGCGCATGGCTGTCGAGCTTCTCCCCATTTCAGCAGCGGTGCAGCTGTTCAGC
GTCGCATCAGAGATTCAAAATCACGCACGCGACACCGTCTACATGTTGTCAGAGACTGAAGGCGACTATGGTGGC
AACAGCAGTGGCTCGGCTGTGCCGCTGCTTGCTGGACTCACAACCCTGGCCATTGCCTTCTTGGTCGTGGTTTGG
ACGGTGCGCCTCATTATCTTTTGGACGCGTCTTGCTTTGCGCGTCGCGCTGTGGACTGCTCTATTGACGGGCTGC
GCTCTCATCTGGACACGTGGTGTGGGACCTTGTCTGCGCGACGCTGTTATTGTGGCGGCAAAAGCCCTGGGCTTC
TTAATGGTGGTCAAGGATGTCTGCATCGAGGCCTACATTCGCTACAACGAACGGGAGAGTTTGGCACAAACAGGC
GCCACAGGCAACTGGGTCTCGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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