Protein ID | OphauB2|2985 |
Gene name | |
Location | Contig_2:223333..223807 |
Strand | + |
Gene length (bp) | 474 |
Transcript length (bp) | 474 |
Coding sequence length (bp) | 474 |
Protein length (aa) | 158 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12716 | Apq12 | Nuclear pore assembly and biogenesis | 1.2E-06 | 56 | 106 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 57 | 79 | 22 |
2 | 86 | 108 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 6365 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|2985 MDLVPTILRMAVELLPISAAVQLFSVASEIQNHARDTVYMLSETEGDYGGNSSGSAVPLLAGLTTLAIAFLVVVW TVRLIIFWTRLALRVALWTALLTGCALIWTRGVGPCLRDAVIVAAKALGFLMVVKDVCIEAYIRYNERESLAQTG ATGNWVS* |
Coding | >OphauB2|2985 ATGGACCTGGTTCCCACCATCTTGCGCATGGCTGTCGAGCTTCTCCCCATTTCAGCAGCGGTGCAGCTGTTCAGC GTCGCATCAGAGATTCAAAATCACGCACGCGACACCGTCTACATGTTGTCAGAGACTGAAGGCGACTATGGTGGC AACAGCAGTGGCTCGGCTGTGCCGCTGCTTGCTGGACTCACAACCCTGGCCATTGCCTTCTTGGTCGTGGTTTGG ACGGTGCGCCTCATTATCTTTTGGACGCGTCTTGCTTTGCGCGTCGCGCTGTGGACTGCTCTATTGACGGGCTGC GCTCTCATCTGGACACGTGGTGTGGGACCTTGTCTGCGCGACGCTGTTATTGTGGCGGCAAAAGCCCTGGGCTTC TTAATGGTGGTCAAGGATGTCTGCATCGAGGCCTACATTCGCTACAACGAACGGGAGAGTTTGGCACAAACAGGC GCCACAGGCAACTGGGTCTCGTAA |
Transcript | >OphauB2|2985 ATGGACCTGGTTCCCACCATCTTGCGCATGGCTGTCGAGCTTCTCCCCATTTCAGCAGCGGTGCAGCTGTTCAGC GTCGCATCAGAGATTCAAAATCACGCACGCGACACCGTCTACATGTTGTCAGAGACTGAAGGCGACTATGGTGGC AACAGCAGTGGCTCGGCTGTGCCGCTGCTTGCTGGACTCACAACCCTGGCCATTGCCTTCTTGGTCGTGGTTTGG ACGGTGCGCCTCATTATCTTTTGGACGCGTCTTGCTTTGCGCGTCGCGCTGTGGACTGCTCTATTGACGGGCTGC GCTCTCATCTGGACACGTGGTGTGGGACCTTGTCTGCGCGACGCTGTTATTGTGGCGGCAAAAGCCCTGGGCTTC TTAATGGTGGTCAAGGATGTCTGCATCGAGGCCTACATTCGCTACAACGAACGGGAGAGTTTGGCACAAACAGGC GCCACAGGCAACTGGGTCTCGTAA |
Gene | >OphauB2|2985 ATGGACCTGGTTCCCACCATCTTGCGCATGGCTGTCGAGCTTCTCCCCATTTCAGCAGCGGTGCAGCTGTTCAGC GTCGCATCAGAGATTCAAAATCACGCACGCGACACCGTCTACATGTTGTCAGAGACTGAAGGCGACTATGGTGGC AACAGCAGTGGCTCGGCTGTGCCGCTGCTTGCTGGACTCACAACCCTGGCCATTGCCTTCTTGGTCGTGGTTTGG ACGGTGCGCCTCATTATCTTTTGGACGCGTCTTGCTTTGCGCGTCGCGCTGTGGACTGCTCTATTGACGGGCTGC GCTCTCATCTGGACACGTGGTGTGGGACCTTGTCTGCGCGACGCTGTTATTGTGGCGGCAAAAGCCCTGGGCTTC TTAATGGTGGTCAAGGATGTCTGCATCGAGGCCTACATTCGCTACAACGAACGGGAGAGTTTGGCACAAACAGGC GCCACAGGCAACTGGGTCTCGTAA |