Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|2965
Gene name
LocationContig_2:177550..177901
Strand-
Gene length (bp)351
Transcript length (bp)219
Coding sequence length (bp)219
Protein length (aa) 73

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09813 Coa3_cc Cytochrome c oxidase assembly factor 3 1.7E-13 20 60

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|C5E368|COA3_LACTC Cytochrome c oxidase assembly factor 3, mitochondrial OS=Lachancea thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL Y-8284) GN=COA3 PE=3 SV=1 18 64 1.0E-09
sp|Q6CHT7|COA3_YARLI Cytochrome c oxidase assembly factor 3, mitochondrial OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=COA3 PE=3 SV=1 18 64 2.0E-09
sp|Q758B5|COA3_ASHGO Cytochrome c oxidase assembly factor 3, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=COA3 PE=3 SV=1 18 64 6.0E-08
sp|Q6CLM9|COA3_KLULA Cytochrome c oxidase assembly factor 3, mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=COA3 PE=3 SV=1 14 64 1.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 34 0.5

Transmembrane Domains

Domain # Start End Length
1 27 49 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|2965
MLEDAQKTYYNTRQDHGPALIRARRPFVVKNALTGLGLLALTGGIYYYTLRAVGQDNFEDVKVPETPRQPPQ*
Coding >OphauB2|2965
ATGTTGGAAGACGCCCAAAAAACTTATTATAACACTCGCCAGGACCATGGTCCAGCACTCATTCGTGCTCGCCGC
CCCTTTGTCGTCAAGAATGCTTTGACGGGTCTTGGTCTGTTGGCACTCACTGGAGGCATATACTACTACACCCTT
CGTGCCGTGGGGCAAGACAATTTTGAAGATGTCAAGGTGCCCGAGACACCTCGTCAGCCGCCACAATAG
Transcript >OphauB2|2965
ATGTTGGAAGACGCCCAAAAAACTTATTATAACACTCGCCAGGACCATGGTCCAGCACTCATTCGTGCTCGCCGC
CCCTTTGTCGTCAAGAATGCTTTGACGGGTCTTGGTCTGTTGGCACTCACTGGAGGCATATACTACTACACCCTT
CGTGCCGTGGGGCAAGACAATTTTGAAGATGTCAAGGTGCCCGAGACACCTCGTCAGCCGCCACAATAG
Gene >OphauB2|2965
ATGTTGGAAGAGTAGGTGTATCCATGCCCTCGGCCATTGTCGCTACCGCATCTCAACGTACTCACGCATCTAGCG
CCCAAAAAACTTATTATAACACTCGCCAGGACCATGGTCCAGCACTCATTCGTGCTCGCCGCCCCTTTGTCGTCA
AGAATGCTTTGACGGGTCTTGGTCTGTTGGCACTCACTGGAGGCATATGTACGCACATGCTCCAATAGAACTGGC
TCAGGCCTCGTGCATTTTGGCGCTGCTGACCTATTTTGTCAAGACTACTACACCCTTCGTGCCGTGGGGCAAGAC
AATTTTGAAGATGTCAAGGTGCCCGAGACACCTCGTCAGCCGCCACAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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