© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|2954 |
| Gene name | |
| Location | Contig_2:154805..155249 |
| Strand | + |
| Gene length (bp) | 444 |
| Transcript length (bp) | 300 |
| Coding sequence length (bp) | 300 |
| Protein length (aa) | 100 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00505 | HMG_box | HMG (high mobility group) box | 4.8E-25 | 24 | 92 |
| PF09011 | HMG_box_2 | HMG-box domain | 1.4E-17 | 21 | 92 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q7S045|NHP6_NEUCR | Non-histone chromosomal protein 6 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nhp-1 PE=3 SV=1 | 1 | 97 | 3.0E-53 |
| sp|Q4IQX3|NHP6_GIBZE | Non-histone chromosomal protein 6 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=NHP6 PE=3 SV=1 | 15 | 97 | 4.0E-50 |
| sp|Q4WY33|NHP6_ASPFU | Non-histone chromosomal protein 6 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=nhp6 PE=3 SV=1 | 1 | 97 | 4.0E-42 |
| sp|Q5B995|NHP6_EMENI | Non-histone chromosomal protein 6 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nhp6 PE=3 SV=1 | 1 | 93 | 1.0E-40 |
| sp|Q6CVH3|NHP6_KLULA | Non-histone chromosomal protein 6 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=NHP6 PE=3 SV=1 | 15 | 93 | 5.0E-37 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q7S045|NHP6_NEUCR | Non-histone chromosomal protein 6 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nhp-1 PE=3 SV=1 | 1 | 97 | 3.0E-53 |
| sp|Q4IQX3|NHP6_GIBZE | Non-histone chromosomal protein 6 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=NHP6 PE=3 SV=1 | 15 | 97 | 4.0E-50 |
| sp|Q4WY33|NHP6_ASPFU | Non-histone chromosomal protein 6 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=nhp6 PE=3 SV=1 | 1 | 97 | 4.0E-42 |
| sp|Q5B995|NHP6_EMENI | Non-histone chromosomal protein 6 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nhp6 PE=3 SV=1 | 1 | 93 | 1.0E-40 |
| sp|Q6CVH3|NHP6_KLULA | Non-histone chromosomal protein 6 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=NHP6 PE=3 SV=1 | 15 | 93 | 5.0E-37 |
| sp|P11633|NHP6B_YEAST | Non-histone chromosomal protein 6B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NHP6B PE=1 SV=3 | 1 | 93 | 4.0E-36 |
| sp|Q75B82|NHP6_ASHGO | Non-histone chromosomal protein 6 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NHP6 PE=3 SV=1 | 20 | 93 | 3.0E-34 |
| sp|Q6CC79|NHP6_YARLI | Non-histone chromosomal protein 6 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=NHP6 PE=3 SV=1 | 1 | 95 | 9.0E-33 |
| sp|P11632|NHP6A_YEAST | Non-histone chromosomal protein 6A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NHP6A PE=1 SV=1 | 20 | 93 | 3.0E-32 |
| sp|Q9UVL1|NHP6_CANAL | Non-histone chromosomal protein 6 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NHP6 PE=3 SV=1 | 20 | 91 | 2.0E-31 |
| sp|Q6BRB4|NHP6_DEBHA | Non-histone chromosomal protein 6 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=NHP6 PE=3 SV=1 | 20 | 91 | 3.0E-31 |
| sp|P0CO24|NHP6_CRYNJ | Non-histone chromosomal protein 6 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=NHP6 PE=3 SV=1 | 1 | 91 | 1.0E-25 |
| sp|P0CO25|NHP6_CRYNB | Non-histone chromosomal protein 6 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=NHP6 PE=3 SV=1 | 1 | 91 | 1.0E-25 |
| sp|P87057|NHP6_SCHPO | Non-histone chromosomal protein 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nhp6 PE=3 SV=1 | 1 | 93 | 2.0E-25 |
| sp|O04235|SSRP1_VICFA | FACT complex subunit SSRP1 OS=Vicia faba GN=SSRP1 PE=2 SV=1 | 20 | 91 | 3.0E-24 |
| sp|P40632|NHP1_BABBO | High mobility group protein homolog NHP1 OS=Babesia bovis PE=1 SV=1 | 5 | 91 | 3.0E-19 |
| sp|Q4PBZ9|NHP6_USTMA | Non-histone chromosomal protein 6 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=NHP6 PE=3 SV=2 | 8 | 92 | 1.0E-18 |
| sp|Q05153|SSRP1_ARATH | FACT complex subunit SSRP1 OS=Arabidopsis thaliana GN=SSRP1 PE=1 SV=2 | 24 | 91 | 5.0E-18 |
| sp|Q09390|HMG12_CAEEL | High mobility group protein 1.2 OS=Caenorhabditis elegans GN=hmg-1.2 PE=1 SV=2 | 4 | 94 | 5.0E-16 |
| sp|P07746|HMGT_ONCMY | High mobility group-T protein OS=Oncorhynchus mykiss PE=2 SV=2 | 14 | 91 | 2.0E-15 |
| sp|Q55C24|NHP6_DICDI | Non-histone chromosomal protein 6 homolog OS=Dictyostelium discoideum GN=nhp6 PE=3 SV=1 | 20 | 92 | 2.0E-15 |
| sp|Q39601|SSRP1_CATRO | FACT complex subunit SSRP1 OS=Catharanthus roseus GN=SSRP1 PE=2 SV=1 | 20 | 91 | 3.0E-15 |
| sp|O15347|HMGB3_HUMAN | High mobility group protein B3 OS=Homo sapiens GN=HMGB3 PE=1 SV=4 | 20 | 93 | 3.0E-15 |
| sp|Q24537|HMG2_DROME | High mobility group protein DSP1 OS=Drosophila melanogaster GN=Dsp1 PE=2 SV=1 | 2 | 91 | 4.0E-15 |
| sp|P26584|HMGB2_CHICK | High mobility group protein B2 OS=Gallus gallus GN=HMGB2 PE=2 SV=2 | 20 | 93 | 9.0E-15 |
| sp|O54879|HMGB3_MOUSE | High mobility group protein B3 OS=Mus musculus GN=Hmgb3 PE=1 SV=3 | 20 | 93 | 1.0E-14 |
| sp|O49595|HMGB1_ARATH | High mobility group B protein 1 OS=Arabidopsis thaliana GN=HMGB1 PE=1 SV=1 | 8 | 97 | 1.0E-14 |
| sp|O49596|HMGB2_ARATH | High mobility group B protein 2 OS=Arabidopsis thaliana GN=HMGB2 PE=1 SV=1 | 16 | 99 | 3.0E-14 |
| sp|Q32L31|HMGB3_BOVIN | High mobility group protein B3 OS=Bos taurus GN=HMGB3 PE=2 SV=2 | 20 | 93 | 4.0E-14 |
| sp|P40618|HMGB3_CHICK | High mobility group protein B3 OS=Gallus gallus GN=HMGB3 PE=2 SV=3 | 20 | 93 | 4.0E-14 |
| sp|Q196Z2|VF401_IIV3 | High mobility group protein homolog 068R OS=Invertebrate iridescent virus 3 GN=IIV3-068R PE=3 SV=1 | 16 | 89 | 1.0E-13 |
| sp|P26583|HMGB2_HUMAN | High mobility group protein B2 OS=Homo sapiens GN=HMGB2 PE=1 SV=2 | 20 | 93 | 1.0E-13 |
| sp|P40673|HMGB2_BOVIN | High mobility group protein B2 OS=Bos taurus GN=HMGB2 PE=1 SV=3 | 20 | 93 | 1.0E-13 |
| sp|P52925|HMGB2_RAT | High mobility group protein B2 OS=Rattus norvegicus GN=Hmgb2 PE=2 SV=2 | 20 | 93 | 2.0E-13 |
| sp|P17741|HMGB2_PIG | High mobility group protein B2 OS=Sus scrofa GN=HMGB2 PE=1 SV=2 | 20 | 91 | 4.0E-13 |
| sp|Q6AZF8|HM20A_XENLA | High mobility group protein 20A OS=Xenopus laevis GN=hmg20a PE=2 SV=1 | 1 | 95 | 4.0E-13 |
| sp|P93047|HMGB3_ARATH | High mobility group B protein 3 OS=Arabidopsis thaliana GN=HMGB3 PE=1 SV=1 | 19 | 99 | 5.0E-13 |
| sp|P40621|HMGL_WHEAT | HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1 | 20 | 92 | 6.0E-13 |
| sp|P30681|HMGB2_MOUSE | High mobility group protein B2 OS=Mus musculus GN=Hmgb2 PE=1 SV=3 | 20 | 93 | 6.0E-13 |
| sp|P12682|HMGB1_PIG | High mobility group protein B1 OS=Sus scrofa GN=HMGB1 PE=2 SV=3 | 12 | 93 | 8.0E-13 |
| sp|Q6DIJ5|HM20A_XENTR | High mobility group protein 20A OS=Xenopus tropicalis GN=hmg20a PE=2 SV=1 | 14 | 95 | 1.0E-12 |
| sp|P63159|HMGB1_RAT | High mobility group protein B1 OS=Rattus norvegicus GN=Hmgb1 PE=1 SV=2 | 12 | 93 | 1.0E-12 |
| sp|A9RA84|HMGB1_PAPAN | High mobility group protein B1 OS=Papio anubis GN=HMGB1 PE=3 SV=1 | 12 | 93 | 1.0E-12 |
| sp|P63158|HMGB1_MOUSE | High mobility group protein B1 OS=Mus musculus GN=Hmgb1 PE=1 SV=2 | 12 | 93 | 1.0E-12 |
| sp|Q4R844|HMGB1_MACFA | High mobility group protein B1 OS=Macaca fascicularis GN=HMGB1 PE=2 SV=3 | 12 | 93 | 1.0E-12 |
| sp|P09429|HMGB1_HUMAN | High mobility group protein B1 OS=Homo sapiens GN=HMGB1 PE=1 SV=3 | 12 | 93 | 1.0E-12 |
| sp|Q08IE6|HMGB1_HORSE | High mobility group protein B1 OS=Equus caballus GN=HMGB1 PE=2 SV=3 | 12 | 93 | 1.0E-12 |
| sp|Q6YKA4|HMGB1_CANLF | High mobility group protein B1 OS=Canis lupus familiaris GN=HMGB1 PE=2 SV=3 | 12 | 93 | 1.0E-12 |
| sp|B1MTB0|HMGB1_CALMO | High mobility group protein B1 OS=Callicebus moloch GN=HMGB1 PE=3 SV=1 | 12 | 93 | 1.0E-12 |
| sp|B0CM99|HMGB1_CALJA | High mobility group protein B1 OS=Callithrix jacchus GN=HMGB1 PE=3 SV=1 | 12 | 93 | 1.0E-12 |
| sp|P10103|HMGB1_BOVIN | High mobility group protein B1 OS=Bos taurus GN=HMGB1 PE=1 SV=3 | 12 | 93 | 1.0E-12 |
| sp|P07156|HMGB1_CRIGR | High mobility group protein B1 (Fragment) OS=Cricetulus griseus GN=HMGB1 PE=1 SV=1 | 12 | 93 | 1.0E-12 |
| sp|P27347|MNB1B_MAIZE | DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1 | 3 | 92 | 1.0E-12 |
| sp|Q04678|SSRP1_CHICK | FACT complex subunit SSRP1 OS=Gallus gallus GN=SSRP1 PE=2 SV=2 | 9 | 93 | 1.0E-12 |
| sp|Q9YH06|HMGB1_CHICK | High mobility group protein B1 OS=Gallus gallus GN=HMGB1 PE=1 SV=1 | 12 | 93 | 2.0E-12 |
| sp|Q42344|HMGB4_ARATH | High mobility group B protein 4 OS=Arabidopsis thaliana GN=HMGB4 PE=1 SV=1 | 9 | 92 | 2.0E-12 |
| sp|P40644|HMGH_STRPU | High mobility group protein 1 homolog OS=Strongylocentrotus purpuratus GN=HMG1 PE=2 SV=1 | 20 | 95 | 3.0E-12 |
| sp|P40620|HMGL_VICFA | HMG1/2-like protein OS=Vicia faba PE=2 SV=1 | 19 | 92 | 3.0E-12 |
| sp|Q9W602|SSRP1_XENLA | FACT complex subunit SSRP1 OS=Xenopus laevis GN=ssrp1 PE=1 SV=1 | 19 | 95 | 9.0E-12 |
| sp|Q08943|SSRP1_MOUSE | FACT complex subunit SSRP1 OS=Mus musculus GN=Ssrp1 PE=1 SV=2 | 1 | 98 | 1.0E-11 |
| sp|P40619|HMGL_IPONI | HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1 | 3 | 92 | 2.0E-11 |
| sp|P26585|HMGL_SOYBN | HMG1/2-like protein OS=Glycine max PE=2 SV=1 | 2 | 99 | 2.0E-11 |
| sp|P11873|HMGC_TETTH | High mobility group protein C OS=Tetrahymena thermophila PE=1 SV=1 | 21 | 91 | 5.0E-11 |
| sp|Q9SUP7|HMGB6_ARATH | High mobility group B protein 6 OS=Arabidopsis thaliana GN=HMGB6 PE=2 SV=1 | 20 | 84 | 8.0E-11 |
| sp|Q08945|SSRP1_HUMAN | FACT complex subunit SSRP1 OS=Homo sapiens GN=SSRP1 PE=1 SV=1 | 19 | 91 | 8.0E-11 |
| sp|Q04931|SSRP1_RAT | FACT complex subunit SSRP1 OS=Rattus norvegicus GN=Ssrp1 PE=1 SV=2 | 20 | 98 | 9.0E-11 |
| sp|P26583|HMGB2_HUMAN | High mobility group protein B2 OS=Homo sapiens GN=HMGB2 PE=1 SV=2 | 17 | 91 | 1.0E-10 |
| sp|P40673|HMGB2_BOVIN | High mobility group protein B2 OS=Bos taurus GN=HMGB2 PE=1 SV=3 | 17 | 91 | 1.0E-10 |
| sp|P17741|HMGB2_PIG | High mobility group protein B2 OS=Sus scrofa GN=HMGB2 PE=1 SV=2 | 17 | 91 | 1.0E-10 |
| sp|B2RPK0|HGB1A_HUMAN | Putative high mobility group protein B1-like 1 OS=Homo sapiens GN=HMGB1P1 PE=5 SV=1 | 12 | 93 | 1.0E-10 |
| sp|Q293F6|SSRP1_DROPS | FACT complex subunit Ssrp1 OS=Drosophila pseudoobscura pseudoobscura GN=Ssrp PE=3 SV=2 | 24 | 95 | 1.0E-10 |
| sp|Q05783|HMGD_DROME | High mobility group protein D OS=Drosophila melanogaster GN=HmgD PE=1 SV=1 | 24 | 85 | 1.0E-10 |
| sp|P52925|HMGB2_RAT | High mobility group protein B2 OS=Rattus norvegicus GN=Hmgb2 PE=2 SV=2 | 17 | 91 | 2.0E-10 |
| sp|P30681|HMGB2_MOUSE | High mobility group protein B2 OS=Mus musculus GN=Hmgb2 PE=1 SV=3 | 17 | 91 | 2.0E-10 |
| sp|P40623|HMG1B_CHITE | Mobility group protein 1B OS=Chironomus tentans GN=HMG1B PE=3 SV=1 | 24 | 91 | 3.0E-10 |
| sp|Q6DJL0|TOX4A_XENLA | TOX high mobility group box family member 4-A OS=Xenopus laevis GN=tox4-a PE=2 SV=1 | 20 | 94 | 4.0E-10 |
| sp|Q9T012|HMG13_ARATH | High mobility group B protein 13 OS=Arabidopsis thaliana GN=HMGB13 PE=2 SV=1 | 8 | 92 | 4.0E-10 |
| sp|A4QNP0|TOX4_XENTR | TOX high mobility group box family member 4 OS=Xenopus tropicalis GN=tox4 PE=2 SV=1 | 20 | 94 | 4.0E-10 |
| sp|Q6IRR0|TOX4B_XENLA | TOX high mobility group box family member 4-B OS=Xenopus laevis GN=tox4-b PE=2 SV=1 | 20 | 94 | 4.0E-10 |
| sp|Q9P0W2|HM20B_HUMAN | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related OS=Homo sapiens GN=HMG20B PE=1 SV=1 | 14 | 92 | 6.0E-10 |
| sp|Q6P8W9|HMGB4_MOUSE | High mobility group protein B4 OS=Mus musculus GN=Hmgb4 PE=2 SV=1 | 20 | 91 | 7.0E-10 |
| sp|Q32L68|HM20B_BOVIN | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related OS=Bos taurus GN=HMG20B PE=2 SV=1 | 14 | 92 | 7.0E-10 |
| sp|P12682|HMGB1_PIG | High mobility group protein B1 OS=Sus scrofa GN=HMGB1 PE=2 SV=3 | 17 | 91 | 8.0E-10 |
| sp|P63159|HMGB1_RAT | High mobility group protein B1 OS=Rattus norvegicus GN=Hmgb1 PE=1 SV=2 | 17 | 91 | 8.0E-10 |
| sp|A9RA84|HMGB1_PAPAN | High mobility group protein B1 OS=Papio anubis GN=HMGB1 PE=3 SV=1 | 17 | 91 | 8.0E-10 |
| sp|P63158|HMGB1_MOUSE | High mobility group protein B1 OS=Mus musculus GN=Hmgb1 PE=1 SV=2 | 17 | 91 | 8.0E-10 |
| sp|Q4R844|HMGB1_MACFA | High mobility group protein B1 OS=Macaca fascicularis GN=HMGB1 PE=2 SV=3 | 17 | 91 | 8.0E-10 |
| sp|P09429|HMGB1_HUMAN | High mobility group protein B1 OS=Homo sapiens GN=HMGB1 PE=1 SV=3 | 17 | 91 | 8.0E-10 |
| sp|Q08IE6|HMGB1_HORSE | High mobility group protein B1 OS=Equus caballus GN=HMGB1 PE=2 SV=3 | 17 | 91 | 8.0E-10 |
| sp|Q6YKA4|HMGB1_CANLF | High mobility group protein B1 OS=Canis lupus familiaris GN=HMGB1 PE=2 SV=3 | 17 | 91 | 8.0E-10 |
| sp|B1MTB0|HMGB1_CALMO | High mobility group protein B1 OS=Callicebus moloch GN=HMGB1 PE=3 SV=1 | 17 | 91 | 8.0E-10 |
| sp|B0CM99|HMGB1_CALJA | High mobility group protein B1 OS=Callithrix jacchus GN=HMGB1 PE=3 SV=1 | 17 | 91 | 8.0E-10 |
| sp|P10103|HMGB1_BOVIN | High mobility group protein B1 OS=Bos taurus GN=HMGB1 PE=1 SV=3 | 17 | 91 | 8.0E-10 |
| sp|O49597|HMGB5_ARATH | High mobility group B protein 5 OS=Arabidopsis thaliana GN=HMGB5 PE=2 SV=1 | 3 | 94 | 8.0E-10 |
| sp|Q9YH06|HMGB1_CHICK | High mobility group protein B1 OS=Gallus gallus GN=HMGB1 PE=1 SV=1 | 17 | 91 | 1.0E-09 |
| sp|Q9SUP7|HMGB6_ARATH | High mobility group B protein 6 OS=Arabidopsis thaliana GN=HMGB6 PE=2 SV=1 | 20 | 92 | 1.0E-09 |
| sp|Q03435|NHP10_YEAST | Non-histone protein 10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NHP10 PE=1 SV=1 | 19 | 97 | 1.0E-09 |
| sp|Q8BU11|TOX4_MOUSE | TOX high mobility group box family member 4 OS=Mus musculus GN=Tox4 PE=1 SV=3 | 20 | 96 | 1.0E-09 |
| sp|Q5R6A9|TOX4_PONAB | TOX high mobility group box family member 4 OS=Pongo abelii GN=TOX4 PE=2 SV=2 | 20 | 96 | 1.0E-09 |
| sp|Q9DC33|HM20A_MOUSE | High mobility group protein 20A OS=Mus musculus GN=Hmg20a PE=1 SV=1 | 7 | 91 | 1.0E-09 |
| sp|Q0P5K4|TOX4_BOVIN | TOX high mobility group box family member 4 OS=Bos taurus GN=TOX4 PE=2 SV=1 | 20 | 96 | 1.0E-09 |
| sp|Q9NP66|HM20A_HUMAN | High mobility group protein 20A OS=Homo sapiens GN=HMG20A PE=1 SV=1 | 7 | 91 | 1.0E-09 |
| sp|O94842|TOX4_HUMAN | TOX high mobility group box family member 4 OS=Homo sapiens GN=TOX4 PE=1 SV=1 | 20 | 96 | 1.0E-09 |
| sp|Q9T012|HMG13_ARATH | High mobility group B protein 13 OS=Arabidopsis thaliana GN=HMGB13 PE=2 SV=1 | 20 | 91 | 2.0E-09 |
| sp|P40625|HMG_TETPY | High mobility group protein OS=Tetrahymena pyriformis GN=HMG PE=1 SV=1 | 21 | 91 | 2.0E-09 |
| sp|O15405|TOX3_HUMAN | TOX high mobility group box family member 3 OS=Homo sapiens GN=TOX3 PE=1 SV=2 | 20 | 93 | 2.0E-09 |
| sp|Q99PM1|TOX4_RAT | TOX high mobility group box family member 4 OS=Rattus norvegicus GN=Tox4 PE=1 SV=1 | 20 | 96 | 2.0E-09 |
| sp|Q05344|SSRP1_DROME | FACT complex subunit Ssrp1 OS=Drosophila melanogaster GN=Ssrp PE=1 SV=2 | 26 | 95 | 2.0E-09 |
| sp|B7SBD2|TOX3_RAT | TOX high mobility group box family member 3 OS=Rattus norvegicus GN=Tox3 PE=1 SV=1 | 20 | 93 | 2.0E-09 |
| sp|Q32L34|HMGB4_BOVIN | High mobility group protein B4 OS=Bos taurus GN=HMGB4 PE=2 SV=1 | 20 | 91 | 2.0E-09 |
| sp|Q65WY8|SSP1B_ORYSJ | FACT complex subunit SSRP1-B OS=Oryza sativa subsp. japonica GN=SSRP1-B PE=2 SV=1 | 24 | 99 | 2.0E-09 |
| sp|Q80W03|TOX3_MOUSE | TOX high mobility group box family member 3 OS=Mus musculus GN=Tox3 PE=2 SV=1 | 20 | 93 | 2.0E-09 |
| sp|Q9Z104|HM20B_MOUSE | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related OS=Mus musculus GN=Hmg20b PE=1 SV=1 | 14 | 92 | 2.0E-09 |
| sp|P40628|HMGH_IIV6 | High mobility group protein homolog OS=Invertebrate iridescent virus 6 GN=EF1 PE=3 SV=2 | 22 | 90 | 3.0E-09 |
| sp|P40622|HMG1A_CHITE | Mobility group protein 1A OS=Chironomus tentans GN=HMG1A PE=3 SV=1 | 24 | 97 | 3.0E-09 |
| sp|Q5ZKF4|HM20A_CHICK | High mobility group protein 20A OS=Gallus gallus GN=HMG20A PE=2 SV=1 | 14 | 91 | 3.0E-09 |
| sp|P07746|HMGT_ONCMY | High mobility group-T protein OS=Oncorhynchus mykiss PE=2 SV=2 | 19 | 91 | 4.0E-09 |
| sp|P26584|HMGB2_CHICK | High mobility group protein B2 OS=Gallus gallus GN=HMGB2 PE=2 SV=2 | 17 | 91 | 4.0E-09 |
| sp|Q4H2R2|SSRP1_CIOIN | FACT complex subunit SSRP1 OS=Ciona intestinalis GN=SSRP1 PE=2 SV=1 | 8 | 93 | 7.0E-09 |
| sp|Q9LEF5|SSRP1_MAIZE | FACT complex subunit SSRP1 OS=Zea mays GN=SSRP1 PE=1 SV=1 | 24 | 95 | 7.0E-09 |
| sp|Q76IQ7|TOX2_RAT | TOX high mobility group box family member 2 OS=Rattus norvegicus GN=Tox2 PE=2 SV=1 | 2 | 93 | 1.0E-08 |
| sp|Q06943|HMGZ_DROME | High mobility group protein Z OS=Drosophila melanogaster GN=HmgZ PE=1 SV=1 | 24 | 95 | 2.0E-08 |
| sp|Q9USU7|YHHB_SCHPO | HMG box-containing protein C28F2.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC28F2.11 PE=1 SV=1 | 15 | 93 | 2.0E-08 |
| sp|P26586|HMGL_TRYBR | High mobility group protein homolog TDP-1 OS=Trypanosoma brucei rhodesiense PE=2 SV=1 | 18 | 90 | 3.0E-08 |
| sp|Q8WW32|HMGB4_HUMAN | High mobility group protein B4 OS=Homo sapiens GN=HMGB4 PE=1 SV=2 | 20 | 96 | 4.0E-08 |
| sp|O01683|SSP1B_CAEEL | FACT complex subunit ssrp1-B OS=Caenorhabditis elegans GN=hmg-3 PE=3 SV=1 | 20 | 91 | 4.0E-08 |
| sp|Q32L34|HMGB4_BOVIN | High mobility group protein B4 OS=Bos taurus GN=HMGB4 PE=2 SV=1 | 17 | 91 | 5.0E-08 |
| sp|Q86U86|PB1_HUMAN | Protein polybromo-1 OS=Homo sapiens GN=PBRM1 PE=1 SV=1 | 2 | 99 | 6.0E-08 |
| sp|Q9LGR0|SSP1A_ORYSJ | FACT complex subunit SSRP1-A OS=Oryza sativa subsp. japonica GN=SSRP1-A PE=2 SV=1 | 24 | 91 | 6.0E-08 |
| sp|Q66JW3|TOX_MOUSE | Thymocyte selection-associated high mobility group box protein TOX OS=Mus musculus GN=Tox PE=1 SV=2 | 2 | 93 | 7.0E-08 |
| sp|O94900|TOX_HUMAN | Thymocyte selection-associated high mobility group box protein TOX OS=Homo sapiens GN=TOX PE=2 SV=3 | 2 | 93 | 1.0E-07 |
| sp|P26586|HMGL_TRYBR | High mobility group protein homolog TDP-1 OS=Trypanosoma brucei rhodesiense PE=2 SV=1 | 5 | 91 | 2.0E-07 |
| sp|Q9MAT6|HMG15_ARATH | High mobility group B protein 15 OS=Arabidopsis thaliana GN=HMGB15 PE=2 SV=1 | 20 | 91 | 2.0E-07 |
| sp|Q6P8W9|HMGB4_MOUSE | High mobility group protein B4 OS=Mus musculus GN=Hmgb4 PE=2 SV=1 | 17 | 91 | 3.0E-07 |
| sp|P40618|HMGB3_CHICK | High mobility group protein B3 OS=Gallus gallus GN=HMGB3 PE=2 SV=3 | 28 | 91 | 4.0E-07 |
| sp|Q9SUP7|HMGB6_ARATH | High mobility group B protein 6 OS=Arabidopsis thaliana GN=HMGB6 PE=2 SV=1 | 25 | 91 | 5.0E-07 |
| sp|B2RPK0|HGB1A_HUMAN | Putative high mobility group protein B1-like 1 OS=Homo sapiens GN=HMGB1P1 PE=5 SV=1 | 17 | 91 | 5.0E-07 |
| sp|Q8BSQ9|PB1_MOUSE | Protein polybromo-1 OS=Mus musculus GN=Pbrm1 PE=1 SV=4 | 2 | 74 | 5.0E-07 |
| sp|B3DM43|SOX5_XENTR | Transcription factor Sox-5 OS=Xenopus tropicalis GN=sox5 PE=2 SV=1 | 11 | 85 | 6.0E-07 |
| sp|O54879|HMGB3_MOUSE | High mobility group protein B3 OS=Mus musculus GN=Hmgb3 PE=1 SV=3 | 28 | 91 | 7.0E-07 |
| sp|P35711|SOX5_HUMAN | Transcription factor SOX-5 OS=Homo sapiens GN=SOX5 PE=1 SV=3 | 11 | 85 | 9.0E-07 |
| sp|P35710|SOX5_MOUSE | Transcription factor SOX-5 OS=Mus musculus GN=Sox5 PE=1 SV=2 | 11 | 85 | 9.0E-07 |
| sp|P40644|HMGH_STRPU | High mobility group protein 1 homolog OS=Strongylocentrotus purpuratus GN=HMG1 PE=2 SV=1 | 17 | 91 | 1.0E-06 |
| sp|Q8WW32|HMGB4_HUMAN | High mobility group protein B4 OS=Homo sapiens GN=HMGB4 PE=1 SV=2 | 17 | 91 | 1.0E-06 |
| sp|Q96NM4|TOX2_HUMAN | TOX high mobility group box family member 2 OS=Homo sapiens GN=TOX2 PE=2 SV=2 | 2 | 70 | 1.0E-06 |
| sp|Q59PR9|HMO1_CANAL | Transcriptional regulator HMO1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=HMO1 PE=2 SV=1 | 14 | 94 | 1.0E-06 |
| sp|O15347|HMGB3_HUMAN | High mobility group protein B3 OS=Homo sapiens GN=HMGB3 PE=1 SV=4 | 28 | 91 | 2.0E-06 |
| sp|Q32L31|HMGB3_BOVIN | High mobility group protein B3 OS=Bos taurus GN=HMGB3 PE=2 SV=2 | 28 | 91 | 2.0E-06 |
| sp|Q8LDF9|HMGB7_ARATH | High mobility group B protein 7 OS=Arabidopsis thaliana GN=HMGB7 PE=1 SV=1 | 8 | 84 | 2.0E-06 |
| sp|B1H349|SOX6_XENTR | Transcription factor Sox-6 OS=Xenopus tropicalis GN=sox6 PE=2 SV=1 | 11 | 85 | 2.0E-06 |
| sp|Q90941|PB1_CHICK | Protein polybromo-1 OS=Gallus gallus GN=PBRM1 PE=1 SV=1 | 2 | 78 | 2.0E-06 |
| sp|P40647|SOX5_XENLA | Transcription factor Sox-5 OS=Xenopus laevis GN=sox5 PE=2 SV=2 | 11 | 85 | 3.0E-06 |
| sp|P25977|UBF1_RAT | Nucleolar transcription factor 1 OS=Rattus norvegicus GN=Ubtf PE=1 SV=1 | 17 | 85 | 3.0E-06 |
| sp|P17480|UBF1_HUMAN | Nucleolar transcription factor 1 OS=Homo sapiens GN=UBTF PE=1 SV=1 | 17 | 85 | 3.0E-06 |
| sp|P25976|UBF1_MOUSE | Nucleolar transcription factor 1 OS=Mus musculus GN=Ubtf PE=1 SV=1 | 17 | 85 | 4.0E-06 |
| sp|Q9N1Q5|SP100_HYLLA | Nuclear autoantigen Sp-100 (Fragment) OS=Hylobates lar GN=SP100 PE=2 SV=1 | 20 | 62 | 5.0E-06 |
| sp|O64702|HMG14_ARATH | High mobility group B protein 14 OS=Arabidopsis thaliana GN=HMGB14 PE=2 SV=2 | 24 | 73 | 1.0E-05 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 29 | 0.45 |
| Transcription Factor Class (based on PFAM domains) |
|---|
| HMG |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|2954 MPKAAAGKRGKETKKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKILGERWKALNEKQRAPYEA KAATDKKRYEDEKQAYNADADDSP* |
| Coding | >OphauB2|2954 ATGCCCAAGGCTGCAGCAGGAAAACGTGGCAAGGAAACCAAGAAGCGTGGCAAGAAGGATCCCAACGCTCCTAAG CGTGGTCTCTCGGCATACATGTTCTTCGCCAACGAACAACGTGAGAATGTGCGCGAGGAGAATCCAGGCATCTCG TTCGGGCAAGTAGGCAAGATTCTGGGCGAGCGATGGAAGGCTCTCAACGAAAAGCAACGTGCACCATATGAGGCC AAAGCAGCTACCGATAAGAAGCGGTACGAGGATGAGAAGCAAGCTTACAACGCTGACGCCGACGACTCTCCATAG |
| Transcript | >OphauB2|2954 ATGCCCAAGGCTGCAGCAGGAAAACGTGGCAAGGAAACCAAGAAGCGTGGCAAGAAGGATCCCAACGCTCCTAAG CGTGGTCTCTCGGCATACATGTTCTTCGCCAACGAACAACGTGAGAATGTGCGCGAGGAGAATCCAGGCATCTCG TTCGGGCAAGTAGGCAAGATTCTGGGCGAGCGATGGAAGGCTCTCAACGAAAAGCAACGTGCACCATATGAGGCC AAAGCAGCTACCGATAAGAAGCGGTACGAGGATGAGAAGCAAGCTTACAACGCTGACGCCGACGACTCTCCATAG |
| Gene | >OphauB2|2954 ATGCCCAAGGCTGCAGCAGGAAAACGTGGCAAGGAAACCAAGAAGCGTGGCAAGAAGGGTTCGTTGATCTGGCGT CGCATGCCTTGTTATCCTGCGTCGGCTACATCGCTCATCCAAAGCCGGATATGACTGACGCCCGCAACAGATCCC AACGCTCCTAAGCGTGGTCTCTCGGCATACATGTTCTTCGCCAACGAACAACGTGAGAATGTGCGCGAGGAGAAT CCAGGCATCTCGTTCGGGCAAGTAGGCAAGATTCTGGGCGAGCGATGGAAGGCTCTCAACGAAAAGCAACGTGCA CCATATGAGGCCAAAGCAGCTACCGATAAGAAGCGGTACGAGGATGAGAAGCAAGCTTACAACGTGAGAAGCCCA CTATTGTTGGAGGCACGCCGACACATGACTAACTTGGCCCTGCAGGCTGACGCCGACGACTCTCCATAG |