Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|2895
Gene name
LocationContig_199:20517..20950
Strand+
Gene length (bp)433
Transcript length (bp)288
Coding sequence length (bp)288
Protein length (aa) 96

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02935 COX7C Cytochrome c oxidase subunit VIIc 2.1E-22 30 93

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005751 mitochondrial respiratory chain complex IV Yes
GO:0006123 mitochondrial electron transport, cytochrome c to oxygen Yes
GO:0098798 mitochondrial protein-containing complex No
GO:0045277 respiratory chain complex IV No
GO:0019646 aerobic electron transport chain No
GO:0005575 cellular_component No
GO:0008150 biological_process No
GO:0006091 generation of precursor metabolites and energy No
GO:0098803 respiratory chain complex No
GO:0098800 inner mitochondrial membrane protein complex No
GO:0015980 energy derivation by oxidation of organic compounds No
GO:0070069 cytochrome complex No
GO:0044237 cellular metabolic process No
GO:0008152 metabolic process No
GO:0009987 cellular process No
GO:0022904 respiratory electron transport chain No
GO:0045333 cellular respiration No
GO:0032991 protein-containing complex No
GO:0098796 membrane protein complex No
GO:0022900 electron transport chain No
GO:0009060 aerobic respiration No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 67 89 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|2895
MSPSTAHHHTITPSYRRLPNMLSHAARTSTTLISRRAFHATRPRFSSPYHYPEGPYSNIPFNPRSKWFPVLFWTY
AAVGFGTPFGIAVFQTYKEQ*
Coding >OphauB2|2895
ATGTCTCCGTCAACTGCACATCATCACACCATCACCCCAAGCTATAGAAGATTGCCGAATATGCTCTCCCACGCA
GCTCGCACCTCGACCACCCTCATCTCTCGCCGGGCCTTCCACGCCACCCGCCCACGCTTCTCATCGCCATACCAC
TATCCCGAGGGGCCGTATAGCAATATCCCCTTTAACCCGCGCAGCAAGTGGTTTCCTGTGCTCTTCTGGACTTAT
GCTGCCGTGGGCTTCGGTACTCCTTTTGGAATTGCTGTCTTCCAGACTTACAAGGAGCAGTAA
Transcript >OphauB2|2895
ATGTCTCCGTCAACTGCACATCATCACACCATCACCCCAAGCTATAGAAGATTGCCGAATATGCTCTCCCACGCA
GCTCGCACCTCGACCACCCTCATCTCTCGCCGGGCCTTCCACGCCACCCGCCCACGCTTCTCATCGCCATACCAC
TATCCCGAGGGGCCGTATAGCAATATCCCCTTTAACCCGCGCAGCAAGTGGTTTCCTGTGCTCTTCTGGACTTAT
GCTGCCGTGGGCTTCGGTACTCCTTTTGGAATTGCTGTCTTCCAGACTTACAAGGAGCAGTAA
Gene >OphauB2|2895
ATGTCTCCGTCAACTGCACATCATCACACCATCACCCCAAGCTATAGGTAAACACACTCTCGCTATGCATACGCG
CCTCTTCTTCCTCTAGCAACACTCACTAATCCACCAATTGCAGAAGATTGCCGAATATGCTCTCCCACGCAGCTC
GCACCTCGACCACCCTCATCTCTCGCCGGGCCTTCCACGCCACCCGCCCACGCTTCTCATCGCCATACCACTATC
CCGAGGGGCCGTATAGCAATATCCCCTTTAACCCGCGCAGCAAGTGGTTTCCTGTGCTCTTCTGGACTTATGCTG
CCGTGGGCTTCGGTACTCCTTTTGGAATTGCTGGTGAGTCTGGCAATGAAATGCCTGAAAGAATTGTGTCCATGA
AACAATGGACACTCAATGCTGACAGACTGCAGTCTTCCAGACTTACAAGGAGCAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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