Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|2872
Gene name
LocationContig_197:33013..34980
Strand+
Gene length (bp)1967
Transcript length (bp)1668
Coding sequence length (bp)1668
Protein length (aa) 556

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05224 NDT80_PhoG NDT80 / PhoG like DNA-binding family 5.0E-35 180 343

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9C2N1|VIB1_NEUCR Transcription factor vib-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=vib-1 PE=3 SV=1 1 519 3.0E-158
sp|Q05534|PHOG_EMENI Protein pacG OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pacG PE=3 SV=3 82 357 6.0E-67

GO

GO Term Description Terminal node
GO:0003677 DNA binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0097159 organic cyclic compound binding No
GO:0003676 nucleic acid binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 41 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|2872
MTDLRGEPAHSNIWSNYSSSAGHVPSRLGGMDSPFHATATRPRSGGLDHEHQSYAYGSSSSSSSSSRVAASGAPA
ASAAGYGDDYERHGSYSSLKRSFSQSEPPAYQEMVQDMREDQSRLTVNNDHKLLAFRRSQDRTTLVDAQGRVQQL
ELSAQLHGMFFLSEMPATNAVDGSMVQQPELTCYRRNLFQISGTLVIPRGQLSHVNDQHESLPVTSMEVAISAIE
SVDGNPVRLIVIPWKTPPPNSPDISQTPDQEPPTLPLIPFQDDGSDSEGELAMYPIGWRRLQFRIATANNGRRKE
LQQHFVLHLKLYGTLADNSKVTMAEATTAPIVVRGRSPRNFQARKEIPLLGSSAGSRGQALVETGLGIVASAMSL
RQDKSRSLDMQVPRSSFTFSPPKSQGGALGSLRSNSFPSWGPSSTASPYPSTSLATDSSSYPKLPLAGGPGFASE
PQELQPLTQAPSLGPTMPLPLTSNDGPLRSHYSYTSTAHGAHADSSSMSMPRYVDSNPRPSKSPRQSGHQHRVVF
RLPLRQHWCVVVPRKRKRISALELLGHHVV*
Coding >OphauB2|2872
ATGACGGACCTGAGGGGCGAGCCGGCCCACTCCAACATCTGGTCCAACTACAGCAGCTCGGCAGGCCATGTGCCC
AGCCGGCTCGGGGGCATGGACTCGCCCTTCCACGCCACAGCGACGCGGCCGCGCAGTGGAGGCCTGGACCACGAG
CACCAGAGCTACGCCTACGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCGTCGCCGCGTCGGGCGCTCCTGCA
GCCTCGGCAGCGGGCTACGGCGACGACTACGAGCGCCACGGCAGCTACTCCAGCCTCAAGCGCTCCTTCTCGCAG
TCGGAGCCGCCCGCCTACCAGGAAATGGTGCAGGACATGCGCGAGGACCAGTCGCGCCTCACCGTCAACAACGAC
CACAAGCTGCTGGCCTTTCGCCGCTCCCAGGACCGCACCACCCTCGTCGACGCCCAGGGCCGCGTCCAGCAGCTC
GAGCTGTCGGCCCAGCTCCACGGCATGTTTTTCCTCTCCGAGATGCCCGCCACCAATGCCGTCGACGGCTCCATG
GTGCAGCAGCCCGAGCTGACGTGCTACCGCCGCAACTTGTTCCAGATTAGCGGCACTCTGGTCATTCCCCGCGGC
CAGCTCAGCCATGTCAATGACCAGCACGAGTCGCTGCCCGTCACCAGCATGGAGGTGGCCATTTCTGCCATTGAG
TCGGTCGACGGCAACCCCGTGCGCCTCATTGTCATTCCCTGGAAGACGCCTCCGCCAAACTCGCCCGACATTAGC
CAGACGCCAGACCAGGAGCCGCCCACCCTGCCGCTCATTCCCTTTCAGGACGATGGCAGCGACAGCGAGGGCGAG
TTGGCCATGTATCCCATTGGATGGCGGCGCCTGCAGTTTCGCATAGCCACGGCAAACAATGGCCGCCGCAAGGAG
CTCCAGCAGCACTTTGTCCTCCACCTCAAGCTCTACGGCACCCTCGCAGACAACTCCAAAGTCACCATGGCCGAG
GCTACCACGGCCCCCATTGTCGTCCGCGGACGCAGCCCCCGCAACTTTCAAGCCCGCAAGGAAATCCCCCTCCTT
GGCTCCAGTGCTGGCTCGCGCGGCCAGGCCCTCGTCGAGACGGGGCTGGGAATCGTTGCCAGCGCCATGAGTCTG
CGCCAGGACAAGTCGCGGAGCCTCGACATGCAGGTGCCGCGCTCCTCCTTTACCTTTTCCCCTCCAAAGTCACAG
GGGGGCGCCTTGGGGTCGCTGAGATCAAACTCTTTTCCTTCTTGGGGCCCCTCGTCCACCGCAAGCCCCTATCCC
TCAACTTCACTGGCCACCGACTCGTCCTCGTACCCCAAACTGCCCCTGGCAGGTGGCCCAGGCTTTGCCAGCGAG
CCACAGGAGCTCCAGCCCCTGACACAGGCCCCCTCGCTGGGGCCAACCATGCCGCTGCCCCTGACAAGCAACGAC
GGGCCTCTGCGGTCACACTACTCGTACACGTCAACCGCCCATGGGGCACACGCCGACAGCAGCAGCATGAGCATG
CCGCGCTACGTCGACAGCAATCCGCGGCCAAGCAAGAGCCCGCGCCAGTCGGGCCACCAGCACCGCGTCGTCTTC
CGACTACCGCTACGGCAGCACTGGTGCGTCGTCGTACCGCGGAAGCGAAAACGCATATCCGCCCTCGAGCTCCTG
GGCCACCACGTCGTCTGA
Transcript >OphauB2|2872
ATGACGGACCTGAGGGGCGAGCCGGCCCACTCCAACATCTGGTCCAACTACAGCAGCTCGGCAGGCCATGTGCCC
AGCCGGCTCGGGGGCATGGACTCGCCCTTCCACGCCACAGCGACGCGGCCGCGCAGTGGAGGCCTGGACCACGAG
CACCAGAGCTACGCCTACGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCGTCGCCGCGTCGGGCGCTCCTGCA
GCCTCGGCAGCGGGCTACGGCGACGACTACGAGCGCCACGGCAGCTACTCCAGCCTCAAGCGCTCCTTCTCGCAG
TCGGAGCCGCCCGCCTACCAGGAAATGGTGCAGGACATGCGCGAGGACCAGTCGCGCCTCACCGTCAACAACGAC
CACAAGCTGCTGGCCTTTCGCCGCTCCCAGGACCGCACCACCCTCGTCGACGCCCAGGGCCGCGTCCAGCAGCTC
GAGCTGTCGGCCCAGCTCCACGGCATGTTTTTCCTCTCCGAGATGCCCGCCACCAATGCCGTCGACGGCTCCATG
GTGCAGCAGCCCGAGCTGACGTGCTACCGCCGCAACTTGTTCCAGATTAGCGGCACTCTGGTCATTCCCCGCGGC
CAGCTCAGCCATGTCAATGACCAGCACGAGTCGCTGCCCGTCACCAGCATGGAGGTGGCCATTTCTGCCATTGAG
TCGGTCGACGGCAACCCCGTGCGCCTCATTGTCATTCCCTGGAAGACGCCTCCGCCAAACTCGCCCGACATTAGC
CAGACGCCAGACCAGGAGCCGCCCACCCTGCCGCTCATTCCCTTTCAGGACGATGGCAGCGACAGCGAGGGCGAG
TTGGCCATGTATCCCATTGGATGGCGGCGCCTGCAGTTTCGCATAGCCACGGCAAACAATGGCCGCCGCAAGGAG
CTCCAGCAGCACTTTGTCCTCCACCTCAAGCTCTACGGCACCCTCGCAGACAACTCCAAAGTCACCATGGCCGAG
GCTACCACGGCCCCCATTGTCGTCCGCGGACGCAGCCCCCGCAACTTTCAAGCCCGCAAGGAAATCCCCCTCCTT
GGCTCCAGTGCTGGCTCGCGCGGCCAGGCCCTCGTCGAGACGGGGCTGGGAATCGTTGCCAGCGCCATGAGTCTG
CGCCAGGACAAGTCGCGGAGCCTCGACATGCAGGTGCCGCGCTCCTCCTTTACCTTTTCCCCTCCAAAGTCACAG
GGGGGCGCCTTGGGGTCGCTGAGATCAAACTCTTTTCCTTCTTGGGGCCCCTCGTCCACCGCAAGCCCCTATCCC
TCAACTTCACTGGCCACCGACTCGTCCTCGTACCCCAAACTGCCCCTGGCAGGTGGCCCAGGCTTTGCCAGCGAG
CCACAGGAGCTCCAGCCCCTGACACAGGCCCCCTCGCTGGGGCCAACCATGCCGCTGCCCCTGACAAGCAACGAC
GGGCCTCTGCGGTCACACTACTCGTACACGTCAACCGCCCATGGGGCACACGCCGACAGCAGCAGCATGAGCATG
CCGCGCTACGTCGACAGCAATCCGCGGCCAAGCAAGAGCCCGCGCCAGTCGGGCCACCAGCACCGCGTCGTCTTC
CGACTACCGCTACGGCAGCACTGGTGCGTCGTCGTACCGCGGAAGCGAAAACGCATATCCGCCCTCGAGCTCCTG
GGCCACCACGTCGTCTGA
Gene >OphauB2|2872
ATGACGGACCTGAGGGGCGAGCCGGCCCACTCCAACATCTGGTCCAACTACAGCAGCTCGGCAGGCCATGTGCCC
AGCCGGCTCGGGGGCATGGACTCGCCCTTCCACGCCACAGCGACGCGGCCGCGCAGTGGAGGCCTGGACCACGAG
CACCAGAGCTACGCCTACGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCGTCGCCGCGTCGGGCGCTCCTGCA
GCCTCGGCAGCGGGCTACGGCGACGACTACGAGCGCCACGGCAGCTACTCCAGCCTCAAGCGCTCCTTCTCGCAG
TCGGAGCCGCCCGCCTACCAGGAAATGGTGCAGGACATGCGCGAGGACCAGTCGCGCCTCACCGTCAACAACGAC
CACAAGCTGCTGGCCTTTCGCCGCTCCCAGGACCGCACCACCCTCGTCGACGCCCAGGGCCGCGTCCAGCAGCTC
GAGCTGTCGGCCCAGCTCCACGGCATGTTTTTCCTCTCCGAGATGCCCGCCACCAATGCCGTCGACGGCTCCATG
GTGCAGCAGCCCGAGCTGACGTGCTACCGCCGCAACTTGTTCCAGATTAGCGGCACTCTGGTCATTCCCCGCGGC
CAGCTCAGCCATGTCAATGACCAGCACGAGTCGCTGCCCGTCACCAGCATGGAGGTGGCCATTTCTGCCATTGAG
TCGGTCGACGGCAACCCCGTGCGCCTCATTGTCATTCCCTGGAAGACGCCTCCGCCAAACTCGCCCGACATTAGC
CAGACGCCAGACCAGGAGCCGCCCACCCTGCCGCTCATTCCCTTTCAGGACGATGGCAGCGACAGCGAGGGCGAG
TTGGCCATGTATCCCATTGGATGGCGGCGCCTGCAGTTTCGCATGTAAGCCCTTTTTTTTTCCCCTCTTGCTCTT
CTCCTCGTCTTGGCCAGCCCATGCTCAGGTCGACGCCGCCTCTTTTCCTCCTCTTCTCCTCCTCCTCCTCCTTCT
ACTTGGCTAACAGCAGCCCTTTGCAGAGCCACGGCAAACAATGGCCGCCGCAAGGAGCTCCAGCAGCACTTTGTC
CTCCACCTCAAGCTCTACGGCACCCTCGCAGACAACTCCAAAGTCACCATGGCCGAGGCTACCACGGCCCCCATT
GTCGTCCGCGGACGCAGCCCCCGCAACTTTCAAGCCCGCAAGGAAATCCCCCTCCTTGGCTCCAGTGCTGGCTCG
CGCGGCCAGGCCCTCGTCGAGACGGGGCTGGGAATCGTTGCCAGCGCCATGAGTCTGCGCCAGGACAAGTCGCGG
AGCCTCGACATGCAGGTGCCGCGCTCCTCCTTTACCTTTTCCCCTCCAAAGTCACAGGGGGGCGCCTTGGGGTCG
CTGAGATCAAAGTGAGTCTATGCCAGCCACTCTCTACATGACTCTTGAATATTCGACAAGGTCTCGACTCTAGAG
CCTCTAGAGTATTCAAAACAAAGACAGACCGCCTGCTGACGATTTCTCTCTTTCTCTCTTCCCAGCTCTTTTCCT
TCTTGGGGCCCCTCGTCCACCGCAAGCCCCTATCCCTCAACTTCACTGGCCACCGACTCGTCCTCGTACCCCAAA
CTGCCCCTGGCAGGTGGCCCAGGCTTTGCCAGCGAGCCACAGGAGCTCCAGCCCCTGACACAGGCCCCCTCGCTG
GGGCCAACCATGCCGCTGCCCCTGACAAGCAACGACGGGCCTCTGCGGTCACACTACTCGTACACGTCAACCGCC
CATGGGGCACACGCCGACAGCAGCAGCATGAGCATGCCGCGCTACGTCGACAGCAATCCGCGGCCAAGCAAGAGC
CCGCGCCAGTCGGGCCACCAGTCGGTGCACAGTGGCGGCTCCGTTGGCGACTCAACAGGCACCGCGTCGTCTTCC
GACTACCGCTACGGCAGCACTGGTGCGTCGTCGTACCGCGGAAGCGAAAACGCATATCCGCCCTCGAGCTCCTGG
GCCACCACGTCGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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