© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|2860 |
| Gene name | |
| Location | Contig_196:22176..23422 |
| Strand | - |
| Gene length (bp) | 1246 |
| Transcript length (bp) | 1095 |
| Coding sequence length (bp) | 1095 |
| Protein length (aa) | 365 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q1JQ66|S35E3_DANRE | Solute carrier family 35 member E3 OS=Danio rerio GN=slc35e3 PE=2 SV=1 | 48 | 354 | 2.0E-42 |
| sp|Q7Z769|S35E3_HUMAN | Solute carrier family 35 member E3 OS=Homo sapiens GN=SLC35E3 PE=2 SV=1 | 71 | 364 | 5.0E-41 |
| sp|A4IFK2|S35E3_BOVIN | Solute carrier family 35 member E3 OS=Bos taurus GN=SLC35E3 PE=2 SV=1 | 66 | 354 | 6.0E-39 |
| sp|Q6PGC7|S35E3_MOUSE | Solute carrier family 35 member E3 OS=Mus musculus GN=Slc35e3 PE=2 SV=1 | 71 | 354 | 4.0E-37 |
| sp|Q8RXL8|Y1689_ARATH | Uncharacterized membrane protein At1g06890 OS=Arabidopsis thaliana GN=At1g06890 PE=1 SV=1 | 90 | 354 | 8.0E-26 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q1JQ66|S35E3_DANRE | Solute carrier family 35 member E3 OS=Danio rerio GN=slc35e3 PE=2 SV=1 | 48 | 354 | 2.0E-42 |
| sp|Q7Z769|S35E3_HUMAN | Solute carrier family 35 member E3 OS=Homo sapiens GN=SLC35E3 PE=2 SV=1 | 71 | 364 | 5.0E-41 |
| sp|A4IFK2|S35E3_BOVIN | Solute carrier family 35 member E3 OS=Bos taurus GN=SLC35E3 PE=2 SV=1 | 66 | 354 | 6.0E-39 |
| sp|Q6PGC7|S35E3_MOUSE | Solute carrier family 35 member E3 OS=Mus musculus GN=Slc35e3 PE=2 SV=1 | 71 | 354 | 4.0E-37 |
| sp|Q8RXL8|Y1689_ARATH | Uncharacterized membrane protein At1g06890 OS=Arabidopsis thaliana GN=At1g06890 PE=1 SV=1 | 90 | 354 | 8.0E-26 |
| sp|Q9SRE4|UGAL2_ARATH | UDP-galactose transporter 2 OS=Arabidopsis thaliana GN=UDP-GALT2 PE=2 SV=1 | 51 | 354 | 8.0E-24 |
| sp|Q550W6|FUCT1_DICDI | GDP-fucose transporter 1 OS=Dictyostelium discoideum GN=slc35c1 PE=3 SV=1 | 75 | 355 | 2.0E-15 |
| sp|Q9SFE9|GONS5_ARATH | GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5 PE=2 SV=1 | 75 | 356 | 1.0E-11 |
| sp|Q9C521|UGAL1_ARATH | UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1 PE=2 SV=1 | 75 | 356 | 1.0E-10 |
| sp|Q6DBP3|PT505_ARATH | Probable sugar phosphate/phosphate translocator At5g05820 OS=Arabidopsis thaliana GN=At5g05820 PE=2 SV=1 | 74 | 354 | 1.0E-06 |
| sp|Q5XF09|PT311_ARATH | Probable sugar phosphate/phosphate translocator At3g11320 OS=Arabidopsis thaliana GN=At3g11320 PE=2 SV=1 | 74 | 354 | 2.0E-06 |
| sp|Q9SS40|PT310_ARATH | Probable sugar phosphate/phosphate translocator At3g10290 OS=Arabidopsis thaliana GN=At3g10290 PE=3 SV=1 | 67 | 353 | 4.0E-06 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 67 | 86 | 19 |
| 2 | 96 | 114 | 18 |
| 3 | 127 | 149 | 22 |
| 4 | 154 | 176 | 22 |
| 5 | 183 | 201 | 18 |
| 6 | 216 | 238 | 22 |
| 7 | 250 | 268 | 18 |
| 8 | 283 | 305 | 22 |
| 9 | 310 | 329 | 19 |
| 10 | 339 | 358 | 19 |
| Orthofinder run ID | 4 |
| Orthogroup | 3133 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|2860 MSIHYHHPPESIELTQQSPFSNTTSSCHQSQYTTLDEAEAAVGSGLLLATEASDSTTSPSCMTTTAWVTVNTLAT IGIVFTNKAIFSDPAWKLCQLTFASFHFAVTWLTLYILSRPQLGYLSPRRAPILHLLPLAVAMCLNVVLPNLSLA YSSVTFYQIARILLTPTVALLNLLLYGATLPRLAIVALIPVCLGVAMVSYYDSLPSAGTSNRATSPLGIVFAFVG IAASSFYTVWIASYHKKFQMSSMQLLYSQAPVAGIILLYAIPFLDTFPEWRLVSGTRWAMIALSGVFASLINISQ FFIVAHTGPVSSTVVGHVKTCTIVAIGWVMSGRSMSDRAVIGILVAISGIIAYSIVMLEHNARR* |
| Coding | >OphauB2|2860 ATGAGCATTCATTATCATCATCCGCCAGAAAGTATCGAATTGACCCAGCAGAGCCCCTTCTCCAACACAACCTCG AGCTGCCACCAGAGCCAGTACACCACCCTCGATGAAGCCGAGGCGGCTGTCGGAAGCGGATTGCTTCTGGCAACA GAAGCTTCCGACTCGACGACTTCTCCTTCATGCATGACCACCACGGCTTGGGTGACTGTCAATACCCTGGCCACC ATTGGCATCGTCTTTACCAACAAGGCCATCTTCTCTGACCCGGCATGGAAACTCTGCCAGCTCACCTTCGCCTCG TTTCACTTCGCTGTGACATGGCTGACGCTCTATATCCTCTCGAGGCCGCAGCTTGGCTACCTAAGCCCTCGTCGG GCACCCATTTTGCATCTGCTTCCCTTGGCAGTTGCAATGTGCCTCAACGTGGTTTTACCCAATCTCTCGCTGGCA TACTCTTCTGTTACCTTCTATCAGATTGCCCGCATTCTTCTCACGCCTACTGTTGCCCTTCTCAACTTGCTTCTC TACGGTGCCACTTTACCCAGGCTTGCCATAGTCGCCCTGATTCCCGTTTGCCTCGGAGTCGCCATGGTTTCCTAC TATGACTCTCTCCCATCAGCAGGAACGAGCAACCGAGCAACGTCACCACTGGGCATCGTCTTTGCCTTTGTTGGT ATCGCTGCATCGTCCTTCTACACGGTGTGGATTGCGAGCTATCACAAGAAGTTTCAAATGAGCAGCATGCAACTG CTATACAGCCAGGCTCCGGTTGCCGGCATTATCCTCCTCTATGCCATCCCTTTTCTGGATACCTTCCCAGAATGG AGACTTGTTTCTGGCACCCGATGGGCCATGATTGCCTTGTCGGGCGTTTTTGCGTCGCTCATTAATATTTCGCAA TTTTTCATTGTCGCTCATACGGGTCCTGTGTCGAGCACGGTTGTCGGCCACGTAAAGACTTGTACCATTGTGGCC ATTGGTTGGGTCATGTCAGGCCGGTCCATGAGTGATAGGGCCGTCATTGGAATCTTGGTTGCCATTAGTGGGATT ATTGCGTATTCAATTGTCATGCTGGAGCACAATGCTCGCAGGTGA |
| Transcript | >OphauB2|2860 ATGAGCATTCATTATCATCATCCGCCAGAAAGTATCGAATTGACCCAGCAGAGCCCCTTCTCCAACACAACCTCG AGCTGCCACCAGAGCCAGTACACCACCCTCGATGAAGCCGAGGCGGCTGTCGGAAGCGGATTGCTTCTGGCAACA GAAGCTTCCGACTCGACGACTTCTCCTTCATGCATGACCACCACGGCTTGGGTGACTGTCAATACCCTGGCCACC ATTGGCATCGTCTTTACCAACAAGGCCATCTTCTCTGACCCGGCATGGAAACTCTGCCAGCTCACCTTCGCCTCG TTTCACTTCGCTGTGACATGGCTGACGCTCTATATCCTCTCGAGGCCGCAGCTTGGCTACCTAAGCCCTCGTCGG GCACCCATTTTGCATCTGCTTCCCTTGGCAGTTGCAATGTGCCTCAACGTGGTTTTACCCAATCTCTCGCTGGCA TACTCTTCTGTTACCTTCTATCAGATTGCCCGCATTCTTCTCACGCCTACTGTTGCCCTTCTCAACTTGCTTCTC TACGGTGCCACTTTACCCAGGCTTGCCATAGTCGCCCTGATTCCCGTTTGCCTCGGAGTCGCCATGGTTTCCTAC TATGACTCTCTCCCATCAGCAGGAACGAGCAACCGAGCAACGTCACCACTGGGCATCGTCTTTGCCTTTGTTGGT ATCGCTGCATCGTCCTTCTACACGGTGTGGATTGCGAGCTATCACAAGAAGTTTCAAATGAGCAGCATGCAACTG CTATACAGCCAGGCTCCGGTTGCCGGCATTATCCTCCTCTATGCCATCCCTTTTCTGGATACCTTCCCAGAATGG AGACTTGTTTCTGGCACCCGATGGGCCATGATTGCCTTGTCGGGCGTTTTTGCGTCGCTCATTAATATTTCGCAA TTTTTCATTGTCGCTCATACGGGTCCTGTGTCGAGCACGGTTGTCGGCCACGTAAAGACTTGTACCATTGTGGCC ATTGGTTGGGTCATGTCAGGCCGGTCCATGAGTGATAGGGCCGTCATTGGAATCTTGGTTGCCATTAGTGGGATT ATTGCGTATTCAATTGTCATGCTGGAGCACAATGCTCGCAGGTGA |
| Gene | >OphauB2|2860 ATGAGCATTCATTATCATCATCCGCCAGAAAGTATCGAATTGACCCAGCAGAGCCCCTTCTCCAACACAACCTCG AGCTGCCACCAGAGCCAGTACACCACCCTCGATGAAGCCGAGGCGGCTGTCGGAAGCGGATTGCTTCTGGCAACA GAAGCTTCCGACTCGACGACTTCTCCTTCATGCATGACCACCACGGCTTGGGTGACTGTCAATACCCTGGCCACC ATTGGCATCGTATGTGCCAGCTGCTCTTGTTCTTGATGCCGCTGCTGCTGACCAGCTTATAGGTCTTTACCAACA AGGCCATCTTCTCTGACCCGGCATGGAAACTCTGCCAGCTCACCTTCGCCTCGTTTCACTTCGCTGTGACATGGC TGACGCTCTATATCCTCTCGAGGCCGCAGCTTGGCTACCTAAGCCCTCGTCGGGCACCCATTTTGCATCTGCTTC CCTTGGCAGTTGCAATGTGCCTCAACGTGGTTTTACCCAATCTCTCGCTGGCATACTCTTCTGTTACCTTCTATC AGATTGCCCGCATTCTTCTCACGCCTACTGTTGCCCTTCTCAACTTGCTTCTCTACGGTGCCACTTTACCCAGGC TTGCCATAGTCGCCCTGATTCCCGTTTGCCTCGGAGTCGCCATGGTTTCCTACTATGACTCTCTCCCATCAGCAG GAACGAGCAACCGAGCAACGTCACCACTGGGCATCGTCTTTGCCTTTGTTGGTATCGCTGCATCGTCCTTCTACA CGGTGTGGATTGCGAGCTATCACAAGAAGTTTCAAATGAGCAGCATGCAACTGCTATACAGCCAGGCTCCGGTTG CCGGCATTATCCTCCTCTATGCCATCCCTTTTCTGGATACCTTCCCAGAATGGAGACTTGTTTCTGGCACCCGAT GGGCCATGATTGCCTTGGTATGCTATTCCTCTCCACGCATGCTTCTAGCTAACAAGATTAGTCGGGCGTTTTTGC GTCGCTCATTAATATTTCGCAATTTTTCATTGTCGCTCATACGGGTCCTGTGTCGAGCACGGTTGTCGGCCACGT AAAGACTTGTACCATTGTGGCCATTGGTTGGGTCATGTCAGGCCGGTCCATGAGTGATAGGGCCGTCATTGGAAT CTTGGTTGCCATTAGTGGGATTATTGCGTAAGTTTTTGGGTGGTGGTGGTGGCCATACGACTTTTCGCTTACGCA TGACAGGTATTCAATTGTCATGCTGGAGCACAATGCTCGCAGGTGA |