Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|2845
Gene name
Location	Contig_195:10067..10821
Strand	-
Gene length (bp)	754
Transcript length (bp)	597
Coding sequence length (bp)	597
Protein length (aa)	199

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF09801	SYS1	Integral membrane protein S linking to the trans Golgi network	6.2E-47	13	155

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P41544\|SYS1_YEAST	Protein SYS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SYS1 PE=1 SV=1	1	155	4.0E-23
sp\|Q1RMQ3\|SYS1_BOVIN	Protein SYS1 homolog OS=Bos taurus GN=SYS1 PE=2 SV=1	17	153	6.0E-10
sp\|A4K2W1\|SYS1_PONAB	Protein SYS1 homolog OS=Pongo abelii GN=SYS1 PE=3 SV=1	17	153	6.0E-09
sp\|A4K2N5\|SYS1_PAPAN	Protein SYS1 homolog OS=Papio anubis GN=SYS1 PE=3 SV=1	17	153	6.0E-09
sp\|Q78S06\|SYS1_MOUSE	Protein SYS1 homolog OS=Mus musculus GN=Sys1 PE=2 SV=1	17	172	6.0E-09

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P41544\|SYS1_YEAST	Protein SYS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SYS1 PE=1 SV=1	1	155	4.0E-23
sp\|Q1RMQ3\|SYS1_BOVIN	Protein SYS1 homolog OS=Bos taurus GN=SYS1 PE=2 SV=1	17	153	6.0E-10
sp\|A4K2W1\|SYS1_PONAB	Protein SYS1 homolog OS=Pongo abelii GN=SYS1 PE=3 SV=1	17	153	6.0E-09
sp\|A4K2N5\|SYS1_PAPAN	Protein SYS1 homolog OS=Papio anubis GN=SYS1 PE=3 SV=1	17	153	6.0E-09
sp\|Q78S06\|SYS1_MOUSE	Protein SYS1 homolog OS=Mus musculus GN=Sys1 PE=2 SV=1	17	172	6.0E-09
sp\|Q8N2H4\|SYS1_HUMAN	Protein SYS1 homolog OS=Homo sapiens GN=SYS1 PE=1 SV=1	17	153	6.0E-09
sp\|A7S6Y0\|SYS1_NEMVE	Protein SYS1 homolog OS=Nematostella vectensis GN=sys1 PE=3 SV=1	17	153	2.0E-06

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	30	52	22
2	72	94	22
3	101	120	19
4	125	144	19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|2845 MPRRRRPPRAGALSDLQPLRIASQIALLQVLFYAAALVLMLFTALVAGISFSPALVLGWEAVRGDTTRGWLMAFV WLLDGGLCMAVAMVILVARSKLVPDFALTIHLLHLIFTSLYARALPRHSMWWATMAASSGLAIALGLWGCRYREL QPVFFAERRFLPAPLAPGPDAEQDAGFARGRGRDAAGEYEMLQLKHAP*
Coding	>OphauB2\|2845 ATGCCCCGCCGCCGCCGCCCGCCGCGCGCCGGCGCCCTCTCGGATCTGCAGCCGCTGCGCATCGCCTCGCAAATC GCCCTCTTGCAAGTCTTGTTCTATGCCGCCGCCCTGGTGCTCATGCTCTTTACCGCGCTCGTGGCGGGCATTTCC TTTTCGCCTGCGCTGGTGCTGGGATGGGAGGCTGTGCGGGGGGATACCACGCGTGGGTGGCTCATGGCTTTTGTC TGGTTGCTAGACGGCGGTTTGTGCATGGCCGTCGCCATGGTGATTCTCGTCGCTCGCAGCAAACTCGTGCCCGAC TTTGCCCTCACCATTCACCTCCTCCACCTCATCTTCACCTCGCTCTACGCCCGCGCCCTGCCCCGCCACTCCATG TGGTGGGCCACCATGGCCGCCTCGTCCGGCCTCGCCATTGCCCTCGGCCTTTGGGGCTGCCGCTATCGCGAACTC CAGCCCGTCTTCTTCGCCGAGCGCCGCTTCCTACCTGCCCCGTTGGCCCCGGGCCCAGACGCGGAGCAAGATGCT GGCTTTGCGCGCGGTAGAGGCAGAGATGCTGCTGGTGAATATGAGATGCTGCAGCTCAAGCATGCGCCATGA
Transcript	>OphauB2\|2845 ATGCCCCGCCGCCGCCGCCCGCCGCGCGCCGGCGCCCTCTCGGATCTGCAGCCGCTGCGCATCGCCTCGCAAATC GCCCTCTTGCAAGTCTTGTTCTATGCCGCCGCCCTGGTGCTCATGCTCTTTACCGCGCTCGTGGCGGGCATTTCC TTTTCGCCTGCGCTGGTGCTGGGATGGGAGGCTGTGCGGGGGGATACCACGCGTGGGTGGCTCATGGCTTTTGTC TGGTTGCTAGACGGCGGTTTGTGCATGGCCGTCGCCATGGTGATTCTCGTCGCTCGCAGCAAACTCGTGCCCGAC TTTGCCCTCACCATTCACCTCCTCCACCTCATCTTCACCTCGCTCTACGCCCGCGCCCTGCCCCGCCACTCCATG TGGTGGGCCACCATGGCCGCCTCGTCCGGCCTCGCCATTGCCCTCGGCCTTTGGGGCTGCCGCTATCGCGAACTC CAGCCCGTCTTCTTCGCCGAGCGCCGCTTCCTACCTGCCCCGTTGGCCCCGGGCCCAGACGCGGAGCAAGATGCT GGCTTTGCGCGCGGTAGAGGCAGAGATGCTGCTGGTGAATATGAGATGCTGCAGCTCAAGCATGCGCCATGA
Gene	>OphauB2\|2845 ATGCCCCGCCGCCGCCGCCCGCCGCGCGCCGGCGCCCTCTCGGATCTGCAGCCGCTGCGCATCGCCTCGCAAATC GCCCTCTTGCAAGTCTTGTTCTATGCCGCCGCCCTGGTGCTCATGCTCTTTACCGCGCTCGTGGCGGGCATTTCC TTTTCGCCTGCGCTGGTGCTGGGATGGGAGGCTGTGCGGGGGGATACCACGCGTGGGTGGCTCATGGCTTTTGTC TGGTTGCTAGACGGCGGTTTGTGCATGTATGTTTTTTTGGCTCGTCCTTTTTCTTTTTCTTTTTTTTTTACCACT CCAAGTCTCGACATCATGGTGGCTGCCCAAGCACAGTTTAGCCTCGACGCAAAATCCTCCCCTCGCAAAACCATG GTCTTGGCATGCTAACTCACATGTTCCCCTTAGGGCCGTCGCCATGGTGATTCTCGTCGCTCGCAGCAAACTCGT GCCCGACTTTGCCCTCACCATTCACCTCCTCCACCTCATCTTCACCTCGCTCTACGCCCGCGCCCTGCCCCGCCA CTCCATGTGGTGGGCCACCATGGCCGCCTCGTCCGGCCTCGCCATTGCCCTCGGCCTTTGGGGCTGCCGCTATCG CGAACTCCAGCCCGTCTTCTTCGCCGAGCGCCGCTTCCTACCTGCCCCGTTGGCCCCGGGCCCAGACGCGGAGCA AGATGCTGGCTTTGCGCGCGGTAGAGGCAGAGATGCTGCTGGTGAATATGAGATGCTGCAGCTCAAGCATGCGCC ATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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