© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|2801 |
| Gene name | |
| Location | Contig_191:27708..29515 |
| Strand | - |
| Gene length (bp) | 1807 |
| Transcript length (bp) | 1749 |
| Coding sequence length (bp) | 1749 |
| Protein length (aa) | 583 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.7E-31 | 96 | 525 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 2.2E-08 | 130 | 243 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 89 | 560 | 4.0E-34 |
| sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 63 | 533 | 2.0E-30 |
| sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 65 | 535 | 1.0E-18 |
| sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 89 | 535 | 8.0E-16 |
| sp|P51563|TCR7_VIBAN | Tetracycline resistance protein, class G OS=Vibrio anguillarum GN=tetA PE=3 SV=1 | 104 | 302 | 3.0E-12 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 89 | 560 | 4.0E-34 |
| sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 63 | 533 | 2.0E-30 |
| sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 65 | 535 | 1.0E-18 |
| sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 89 | 535 | 8.0E-16 |
| sp|P51563|TCR7_VIBAN | Tetracycline resistance protein, class G OS=Vibrio anguillarum GN=tetA PE=3 SV=1 | 104 | 302 | 3.0E-12 |
| sp|P02980|TCR2_ECOLX | Tetracycline resistance protein, class B OS=Escherichia coli GN=tetA PE=1 SV=1 | 100 | 285 | 1.0E-09 |
| sp|P33733|TCR4_SALOR | Tetracycline resistance protein, class D OS=Salmonella ordonez GN=tetA PE=3 SV=1 | 100 | 292 | 1.0E-08 |
| sp|P02982|TCR1_ECOLX | Tetracycline resistance protein, class A OS=Escherichia coli GN=tetA PE=3 SV=2 | 90 | 245 | 1.0E-07 |
| sp|Q9D2V8|MFS10_MOUSE | Major facilitator superfamily domain-containing protein 10 OS=Mus musculus GN=Mfsd10 PE=1 SV=1 | 120 | 249 | 6.0E-07 |
| sp|Q0P5M9|MFS10_BOVIN | Major facilitator superfamily domain-containing protein 10 OS=Bos taurus GN=MFSD10 PE=2 SV=1 | 120 | 287 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0005575 | cellular_component | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 25 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 132 | 154 | 22 |
| 2 | 164 | 181 | 17 |
| 3 | 188 | 210 | 22 |
| 4 | 225 | 247 | 22 |
| 5 | 254 | 276 | 22 |
| 6 | 376 | 398 | 22 |
| 7 | 411 | 430 | 19 |
| 8 | 440 | 462 | 22 |
| 9 | 475 | 497 | 22 |
| 10 | 512 | 534 | 22 |
| 11 | 547 | 569 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|2801 MTRPTLRTASTGSFHAGAPIPALGMPRRQPSASSPKKTPKPPSSHGYQTFPTEPPETPLAPASDDDSIVSLASSS SSSPSCQDQHETPLPVRQLLLLAFLSLAEQTALNSISPYLPEMVISMPGIPPDQAGLWVGTLASAFALAQLSTNL LWGYASDYIGRKPVLLAGTASLMCCFAVFGLCTRYWQIVVVHVAMGLLNGNAACVPTVLGEVTDRSNQSKAFTYL PVIYSLGGITGPALGGVLVGRLAPDRYPYLAPNVLGAALLAVSVLVVAIWFRETLDKQSQPPPWKPRWLLRLSSW LRRWRYPPSKRDSWSTRWPQASAQAAPLVSSASSTSSTSSSRQDASSASSMDPSKDSLAPSPWREIFNHTTLLLL ATYLVFQLSNISFNSLYPIFAAATPPTGRGLDPQRIGLSLGLAGAAVIVFQAFVYQPLKARMGSLGTYRFSLLGM AVSMVLMPWVGYVQDGRALLYTELGIVLILKNICAVGGLSSVMLLITNSAPSHTSLGTLNGVAQTLSALGRSIGP FVSGGLFTLSTTVRPKGEALAWSVFGGLALLGWCASLAINGAGLESEDVQDESDEAA* |
| Coding | >OphauB2|2801 ATGACTCGCCCAACCCTTCGCACCGCGTCTACAGGCTCCTTTCACGCCGGCGCACCCATTCCTGCTCTCGGCATG CCGCGCCGCCAGCCGTCTGCCTCGTCGCCCAAGAAGACGCCCAAGCCGCCCTCGTCGCACGGCTACCAAACCTTT CCCACCGAACCGCCCGAGACGCCGCTTGCGCCCGCGTCGGACGACGACAGCATCGTCTCGCTTGCCTCGTCGTCG TCGTCGTCGCCGTCTTGCCAGGACCAGCATGAAACGCCCCTGCCCGTGCGCCAGCTCTTGCTGCTGGCCTTTCTC TCCCTGGCCGAGCAGACTGCCCTCAACTCGATTTCGCCCTATCTCCCCGAAATGGTGATTTCCATGCCCGGCATC CCGCCAGACCAGGCCGGGCTCTGGGTCGGCACGCTGGCCAGCGCCTTTGCTCTAGCGCAGCTGTCCACCAACCTG CTCTGGGGCTATGCCTCGGACTATATTGGCCGCAAGCCCGTCTTGCTCGCCGGCACCGCCTCCCTCATGTGCTGC TTTGCCGTCTTTGGCCTGTGCACGCGCTACTGGCAGATTGTCGTGGTTCACGTGGCCATGGGCCTGCTCAATGGC AATGCCGCCTGCGTGCCCACCGTCTTGGGCGAGGTGACGGACCGCTCCAACCAGAGCAAGGCCTTTACCTACTTG CCCGTCATCTACTCGCTGGGAGGCATCACCGGCCCCGCCCTGGGCGGCGTGCTTGTCGGCCGCCTTGCTCCCGAC CGCTATCCCTATCTCGCCCCCAATGTCCTTGGCGCCGCCCTGCTGGCTGTTAGCGTCCTTGTCGTGGCCATTTGG TTCCGCGAGACGCTCGACAAGCAGAGCCAGCCGCCGCCCTGGAAGCCTCGCTGGCTGCTCCGTCTGTCCTCATGG CTGCGCCGCTGGCGCTACCCGCCCTCGAAGCGCGACTCGTGGAGCACGCGCTGGCCCCAGGCCTCGGCCCAAGCC GCTCCCCTCGTCTCGTCGGCCTCGTCCACCTCGTCCACCTCGTCGTCGCGCCAAGACGCCTCGTCGGCAAGCTCC ATGGATCCCTCCAAGGACTCTCTTGCGCCCTCGCCCTGGCGCGAAATCTTTAACCACACCACCCTCCTCCTCCTC GCCACCTATCTCGTCTTCCAGCTCTCAAACATTAGCTTCAACAGCCTCTACCCCATCTTTGCCGCCGCCACGCCC CCGACTGGCCGCGGCCTCGACCCCCAGCGCATCGGGCTCAGTCTTGGCCTCGCCGGCGCTGCCGTTATTGTCTTT CAGGCCTTTGTCTACCAGCCACTCAAGGCCCGCATGGGCAGTCTCGGCACCTATCGCTTCTCCCTGCTCGGCATG GCTGTGAGCATGGTGCTCATGCCCTGGGTCGGCTATGTCCAAGACGGCCGCGCCTTGCTCTATACCGAGCTTGGC ATTGTGCTCATTCTCAAGAATATCTGTGCCGTTGGCGGCCTCTCGAGCGTCATGCTCTTGATTACAAACTCTGCC CCCTCCCACACCAGCCTCGGCACCCTCAACGGCGTCGCCCAGACCCTCTCCGCCCTCGGCCGCAGCATCGGCCCC TTTGTCTCGGGCGGCCTCTTTACCCTTTCCACCACGGTCCGGCCCAAGGGCGAGGCGCTCGCCTGGAGTGTCTTT GGCGGACTCGCTCTCTTGGGCTGGTGCGCCAGTCTCGCAATCAATGGCGCCGGCCTAGAGAGCGAGGATGTACAG GATGAGAGTGACGAGGCTGCATAG |
| Transcript | >OphauB2|2801 ATGACTCGCCCAACCCTTCGCACCGCGTCTACAGGCTCCTTTCACGCCGGCGCACCCATTCCTGCTCTCGGCATG CCGCGCCGCCAGCCGTCTGCCTCGTCGCCCAAGAAGACGCCCAAGCCGCCCTCGTCGCACGGCTACCAAACCTTT CCCACCGAACCGCCCGAGACGCCGCTTGCGCCCGCGTCGGACGACGACAGCATCGTCTCGCTTGCCTCGTCGTCG TCGTCGTCGCCGTCTTGCCAGGACCAGCATGAAACGCCCCTGCCCGTGCGCCAGCTCTTGCTGCTGGCCTTTCTC TCCCTGGCCGAGCAGACTGCCCTCAACTCGATTTCGCCCTATCTCCCCGAAATGGTGATTTCCATGCCCGGCATC CCGCCAGACCAGGCCGGGCTCTGGGTCGGCACGCTGGCCAGCGCCTTTGCTCTAGCGCAGCTGTCCACCAACCTG CTCTGGGGCTATGCCTCGGACTATATTGGCCGCAAGCCCGTCTTGCTCGCCGGCACCGCCTCCCTCATGTGCTGC TTTGCCGTCTTTGGCCTGTGCACGCGCTACTGGCAGATTGTCGTGGTTCACGTGGCCATGGGCCTGCTCAATGGC AATGCCGCCTGCGTGCCCACCGTCTTGGGCGAGGTGACGGACCGCTCCAACCAGAGCAAGGCCTTTACCTACTTG CCCGTCATCTACTCGCTGGGAGGCATCACCGGCCCCGCCCTGGGCGGCGTGCTTGTCGGCCGCCTTGCTCCCGAC CGCTATCCCTATCTCGCCCCCAATGTCCTTGGCGCCGCCCTGCTGGCTGTTAGCGTCCTTGTCGTGGCCATTTGG TTCCGCGAGACGCTCGACAAGCAGAGCCAGCCGCCGCCCTGGAAGCCTCGCTGGCTGCTCCGTCTGTCCTCATGG CTGCGCCGCTGGCGCTACCCGCCCTCGAAGCGCGACTCGTGGAGCACGCGCTGGCCCCAGGCCTCGGCCCAAGCC GCTCCCCTCGTCTCGTCGGCCTCGTCCACCTCGTCCACCTCGTCGTCGCGCCAAGACGCCTCGTCGGCAAGCTCC ATGGATCCCTCCAAGGACTCTCTTGCGCCCTCGCCCTGGCGCGAAATCTTTAACCACACCACCCTCCTCCTCCTC GCCACCTATCTCGTCTTCCAGCTCTCAAACATTAGCTTCAACAGCCTCTACCCCATCTTTGCCGCCGCCACGCCC CCGACTGGCCGCGGCCTCGACCCCCAGCGCATCGGGCTCAGTCTTGGCCTCGCCGGCGCTGCCGTTATTGTCTTT CAGGCCTTTGTCTACCAGCCACTCAAGGCCCGCATGGGCAGTCTCGGCACCTATCGCTTCTCCCTGCTCGGCATG GCTGTGAGCATGGTGCTCATGCCCTGGGTCGGCTATGTCCAAGACGGCCGCGCCTTGCTCTATACCGAGCTTGGC ATTGTGCTCATTCTCAAGAATATCTGTGCCGTTGGCGGCCTCTCGAGCGTCATGCTCTTGATTACAAACTCTGCC CCCTCCCACACCAGCCTCGGCACCCTCAACGGCGTCGCCCAGACCCTCTCCGCCCTCGGCCGCAGCATCGGCCCC TTTGTCTCGGGCGGCCTCTTTACCCTTTCCACCACGGTCCGGCCCAAGGGCGAGGCGCTCGCCTGGAGTGTCTTT GGCGGACTCGCTCTCTTGGGCTGGTGCGCCAGTCTCGCAATCAATGGCGCCGGCCTAGAGAGCGAGGATGTACAG GATGAGAGTGACGAGGCTGCATAG |
| Gene | >OphauB2|2801 ATGACTCGCCCAACCCTTCGCACCGCGTCTACAGGCTCCTTTCACGCCGGCGCACCCATTCCTGCTCTCGGCATG CCGCGCCGCCAGCCGTCTGCCTCGTCGCCCAAGAAGACGCCCAAGCCGCCCTCGTCGCACGGCTACCAAACCTTT CCCACCGAACCGCCCGAGACGCCGCTTGCGCCCGCGTCGGACGACGACAGCATCGTCTCGCTTGCCTCGTCGTCG TCGTCGTCGCCGTCTTGCCAGGACCAGCATGAAACGCCCCTGCCCGTGCGCCAGCTCTTGCTGCTGGCCTTTCTC TCCCTGGCCGAGCAGACTGCCCTCAACTCGATTTCGCCCTATCTCCCCGAAATGGTGATTTCCATGCCCGGCATC CCGCCAGACCAGGCCGGGCTCTGGGTCGGCACGCTGGCCAGCGCCTTTGCTCTAGCGCAGCTGTCCACCAACCTG CTCTGGGGCTATGCCTCGGACTATATTGGCCGCAAGCCCGTCTTGCTCGCCGGCACCGCCTCCCTCATGTGCTGC TTTGCCGTCTTTGGCCTGTGCACGCGCTACTGGCAGATTGTCGTGGTTCACGTGGCCATGGGCCTGCTCAATGGC AATGCCGCCTGCGTGCCCACCGTCTTGGGCGAGGTGACGGACCGCTCCAACCAGAGCAAGGCCTTTACCTACTTG CCCGTCATCTACTCGCTGGGAGGCATCACCGGCCCCGCCCTGGGCGGCGTGCTTGTCGGCCGCCTTGCTCCCGAC CGCTATCCCTATCTCGCCCCCAATGTCCTTGGCGCCGCCCTGCTGGCTGTTAGCGTCCTTGTCGTGGCCATTTGG TTCCGCGAGACGCTCGACAAGCAGAGCCAGCCGCCGCCCTGGAAGCCTCGCTGGCTGCTCCGTCTGTCCTCATGG CTGCGCCGCTGGCGCTACCCGCCCTCGAAGCGCGACTCGTGGAGCACGCGCTGGCCCCAGGCCTCGGCCCAAGCC GCTCCCCTCGTCTCGTCGGCCTCGTCCACCTCGTCCACCTCGTCGTCGCGCCAAGACGCCTCGTCGGCAAGCTCC ATGGATCCCTCCAAGGACTCTCTTGCGCCCTCGCCCTGGCGCGAAATCTTTAACCACACCACCCTCCTCCTCCTC GCCACCTATCTCGTCTTCCAGCTCTCAAACATTAGCTTCAACAGCCTCTACCCCATCTTTGCCGCCGCCACGCCC CCGACTGGCCGCGGCCTCGACCCCCAGCGCATCGGGCTCAGTCTTGGCCTCGCCGGCGCTGCCGTTATTGTCTTT CAGGCCTTTGTCTACCAGCCACTCAAGGCCCGCATGGGCAGTCTCGGCACCTATCGCTTCTCCCTGCTCGGCATG GCTGTGAGCATGGTGCTCATGCCCTGGGTCGGCTATGTCCAAGACGGCCGCGCCTTGCTCTATACCGAGCTTGGC ATTGTGCTCATTCTCAAGAATATCTGTGCCGTTGGCGGCCTCTCGAGCGTCATGCTCTTGGTACGTGCTCCATTT AAGACGAGAGAACCCAAGACTCACCCCCCGTCCAATTTTCCAGATTACAAACTCTGCCCCCTCCCACACCAGCCT CGGCACCCTCAACGGCGTCGCCCAGACCCTCTCCGCCCTCGGCCGCAGCATCGGCCCCTTTGTCTCGGGCGGCCT CTTTACCCTTTCCACCACGGTCCGGCCCAAGGGCGAGGCGCTCGCCTGGAGTGTCTTTGGCGGACTCGCTCTCTT GGGCTGGTGCGCCAGTCTCGCAATCAATGGCGCCGGCCTAGAGAGCGAGGATGTACAGGATGAGAGTGACGAGGC TGCATAG |