© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|2761 |
| Gene name | |
| Location | Contig_19:199321..201386 |
| Strand | + |
| Gene length (bp) | 2065 |
| Transcript length (bp) | 1686 |
| Coding sequence length (bp) | 1686 |
| Protein length (aa) | 562 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 4.0E-36 | 27 | 493 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.0E-08 | 36 | 175 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 18 | 541 | 1.0E-76 |
| sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 32 | 501 | 2.0E-39 |
| sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 10 | 501 | 7.0E-37 |
| sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 40 | 505 | 2.0E-33 |
| sp|D8MQN9|MDTG_ERWBE | Multidrug resistance protein MdtG OS=Erwinia billingiae (strain Eb661) GN=mdtG PE=3 SV=1 | 22 | 191 | 1.0E-10 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 18 | 541 | 1.0E-76 |
| sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 32 | 501 | 2.0E-39 |
| sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 10 | 501 | 7.0E-37 |
| sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 40 | 505 | 2.0E-33 |
| sp|D8MQN9|MDTG_ERWBE | Multidrug resistance protein MdtG OS=Erwinia billingiae (strain Eb661) GN=mdtG PE=3 SV=1 | 22 | 191 | 1.0E-10 |
| sp|B4EYY4|MDTG_PROMH | Multidrug resistance protein MdtG OS=Proteus mirabilis (strain HI4320) GN=mdtG PE=3 SV=1 | 22 | 223 | 7.0E-10 |
| sp|Q9D2V8|MFS10_MOUSE | Major facilitator superfamily domain-containing protein 10 OS=Mus musculus GN=Mfsd10 PE=1 SV=1 | 63 | 212 | 1.0E-08 |
| sp|Q14728|MFS10_HUMAN | Major facilitator superfamily domain-containing protein 10 OS=Homo sapiens GN=MFSD10 PE=1 SV=1 | 63 | 175 | 2.0E-08 |
| sp|Q0P5M9|MFS10_BOVIN | Major facilitator superfamily domain-containing protein 10 OS=Bos taurus GN=MFSD10 PE=2 SV=1 | 63 | 212 | 2.0E-08 |
| sp|A8GCZ5|MDTG_SERP5 | Multidrug resistance protein MdtG OS=Serratia proteamaculans (strain 568) GN=mdtG PE=3 SV=1 | 37 | 176 | 5.0E-08 |
| sp|P51564|TCR8_PASMD | Tetracycline resistance protein, class H OS=Pasteurella multocida GN=tetA PE=3 SV=1 | 84 | 187 | 1.0E-07 |
| sp|Q9HE13|YI32_SCHPO | Uncharacterized MFS-type transporter C1399.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1399.02 PE=3 SV=1 | 68 | 177 | 5.0E-07 |
| sp|Q10072|YAN6_SCHPO | Uncharacterized transporter C3H1.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.06c PE=3 SV=1 | 68 | 177 | 7.0E-07 |
| sp|P02980|TCR2_ECOLX | Tetracycline resistance protein, class B OS=Escherichia coli GN=tetA PE=1 SV=1 | 41 | 173 | 2.0E-06 |
| sp|P02982|TCR1_ECOLX | Tetracycline resistance protein, class A OS=Escherichia coli GN=tetA PE=3 SV=2 | 20 | 173 | 3.0E-06 |
| sp|P02981|TCR3_ECOLX | Tetracycline resistance protein, class C OS=Escherichia coli GN=tetA PE=1 SV=1 | 41 | 187 | 3.0E-06 |
| sp|Q6GIU7|NORA_STAAR | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MRSA252) GN=norA PE=3 SV=1 | 22 | 187 | 7.0E-06 |
| sp|Q5HHX4|NORA_STAAC | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain COL) GN=norA PE=3 SV=1 | 22 | 187 | 1.0E-05 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0005575 | cellular_component | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 36 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 24 | 46 | 22 |
| 2 | 61 | 83 | 22 |
| 3 | 95 | 114 | 19 |
| 4 | 124 | 146 | 22 |
| 5 | 153 | 175 | 22 |
| 6 | 197 | 219 | 22 |
| 7 | 324 | 346 | 22 |
| 8 | 380 | 402 | 22 |
| 9 | 415 | 437 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|2761 MSKPVAFSRHQPGRRPAAFPVQQMFILACCRICEPIAFMSIFPYIYYMIEDFGVTSDPSTISVYAGMVTSAFTLA EFSTGMLWGRLSDRIGRKPVLLTGLFGTALSVLVFGFSQSLPVALLARALGGLLNGNIGVLQTTVAELVTIREHQ PRAYTIMPMVWCIGSIVGPMIGGALARPCISYPELFAPGSVWDRFPYLLPNLFSAAAVLVGLVVGLLFLDETHAT AKLRRDRGRELGRRLASWLGASSVRVSCTAGNEKHQGLLISNSAPPSRYGACSSLPQTPAVDDEESLPSYQSRQT SPQLLPQKQPPVMARAPATGNAHIFTKPVVMNIVSYGILAFHTMTFDQLLPVFLSTAPPQQPVMELPFKFVDGFG LETKTIGLIMSVQGIYSLLSNFAIVPPATRRLGSLRLFRLLAVSYFALYLTTPYLVLLPTALRMPSICLLVIWKC TYSTMAYPNNAILLANAAPSRQVLGTINGVAASTASLCRALGPTLSGVLYAVGLRTGYSGLAWWVSGLITLVGAY LSFQITEGDAPDTQLERHDATRDLDESLLYSDEEAV* |
| Coding | >OphauB2|2761 ATGTCCAAGCCTGTTGCCTTCTCTCGGCACCAGCCAGGCAGACGACCTGCGGCCTTTCCTGTGCAGCAAATGTTC ATTCTAGCATGCTGCAGAATATGCGAGCCCATTGCCTTCATGTCCATCTTCCCATACATTTACTACATGATTGAA GACTTTGGCGTCACCAGCGACCCAAGTACTATTTCTGTCTATGCTGGCATGGTCACATCTGCCTTTACTCTGGCC GAGTTTTCCACCGGCATGCTCTGGGGAAGACTGAGCGACAGGATTGGACGCAAGCCAGTGTTGCTGACGGGGTTG TTTGGCACCGCCCTGAGCGTGCTCGTCTTTGGCTTCTCCCAGAGCCTTCCTGTGGCCCTTTTGGCCCGAGCTCTG GGCGGCTTGCTTAATGGAAACATCGGTGTGCTGCAGACGACAGTGGCCGAATTAGTCACGATAAGAGAGCATCAG CCCCGCGCCTACACCATCATGCCCATGGTCTGGTGCATTGGATCCATCGTCGGCCCCATGATTGGCGGCGCCCTG GCCAGGCCCTGCATCAGCTACCCCGAGCTGTTTGCCCCCGGCAGCGTCTGGGACCGATTTCCGTACTTGCTGCCC AATCTCTTCAGCGCCGCCGCCGTTCTCGTCGGCCTCGTCGTTGGTCTTCTTTTCCTCGACGAGACACATGCTACC GCCAAGCTGAGGCGCGACCGTGGCCGAGAGCTGGGCAGGCGCCTAGCATCGTGGCTGGGTGCTTCGTCGGTCCGC GTCTCTTGTACAGCTGGCAACGAGAAGCACCAAGGCCTCCTCATCTCCAACTCGGCCCCTCCTTCGCGCTACGGT GCCTGTTCGTCGCTTCCTCAGACCCCAGCAGTCGACGATGAGGAGTCTCTTCCCTCATACCAGAGTCGCCAGACA TCGCCTCAGCTGCTGCCACAGAAGCAGCCGCCAGTCATGGCTCGGGCTCCCGCGACTGGCAATGCTCATATATTC ACCAAGCCTGTCGTCATGAATATTGTCTCGTACGGCATTCTAGCCTTCCATACCATGACATTTGACCAGCTTCTC CCAGTTTTTCTCAGCACGGCGCCACCGCAGCAACCAGTCATGGAGCTGCCTTTCAAGTTCGTCGACGGCTTCGGG CTTGAGACCAAGACCATTGGCCTCATCATGTCAGTCCAAGGCATCTATTCGCTCCTCTCCAACTTTGCCATTGTA CCGCCCGCGACACGTCGTCTTGGCTCGCTGCGCCTCTTCCGCCTCCTCGCCGTTTCCTATTTTGCTCTCTATCTT ACCACGCCATATCTTGTTCTACTGCCTACTGCGCTGCGCATGCCATCCATCTGCCTGCTCGTCATCTGGAAATGC ACCTATTCCACCATGGCCTATCCAAACAACGCCATCTTGTTGGCCAACGCGGCTCCTTCGCGCCAGGTTCTTGGC ACTATCAATGGCGTGGCCGCCTCAACAGCCAGTCTCTGCCGCGCTCTTGGCCCCACGCTCTCGGGAGTCCTCTAT GCTGTTGGCCTTCGTACAGGATATTCTGGCCTTGCATGGTGGGTCAGCGGACTCATTACCCTGGTTGGGGCCTAC TTGAGCTTCCAAATCACTGAAGGCGACGCCCCTGACACGCAGTTGGAAAGGCACGATGCCACGCGAGACCTCGAT GAGTCGCTCTTGTACAGTGACGAAGAGGCAGTCTAG |
| Transcript | >OphauB2|2761 ATGTCCAAGCCTGTTGCCTTCTCTCGGCACCAGCCAGGCAGACGACCTGCGGCCTTTCCTGTGCAGCAAATGTTC ATTCTAGCATGCTGCAGAATATGCGAGCCCATTGCCTTCATGTCCATCTTCCCATACATTTACTACATGATTGAA GACTTTGGCGTCACCAGCGACCCAAGTACTATTTCTGTCTATGCTGGCATGGTCACATCTGCCTTTACTCTGGCC GAGTTTTCCACCGGCATGCTCTGGGGAAGACTGAGCGACAGGATTGGACGCAAGCCAGTGTTGCTGACGGGGTTG TTTGGCACCGCCCTGAGCGTGCTCGTCTTTGGCTTCTCCCAGAGCCTTCCTGTGGCCCTTTTGGCCCGAGCTCTG GGCGGCTTGCTTAATGGAAACATCGGTGTGCTGCAGACGACAGTGGCCGAATTAGTCACGATAAGAGAGCATCAG CCCCGCGCCTACACCATCATGCCCATGGTCTGGTGCATTGGATCCATCGTCGGCCCCATGATTGGCGGCGCCCTG GCCAGGCCCTGCATCAGCTACCCCGAGCTGTTTGCCCCCGGCAGCGTCTGGGACCGATTTCCGTACTTGCTGCCC AATCTCTTCAGCGCCGCCGCCGTTCTCGTCGGCCTCGTCGTTGGTCTTCTTTTCCTCGACGAGACACATGCTACC GCCAAGCTGAGGCGCGACCGTGGCCGAGAGCTGGGCAGGCGCCTAGCATCGTGGCTGGGTGCTTCGTCGGTCCGC GTCTCTTGTACAGCTGGCAACGAGAAGCACCAAGGCCTCCTCATCTCCAACTCGGCCCCTCCTTCGCGCTACGGT GCCTGTTCGTCGCTTCCTCAGACCCCAGCAGTCGACGATGAGGAGTCTCTTCCCTCATACCAGAGTCGCCAGACA TCGCCTCAGCTGCTGCCACAGAAGCAGCCGCCAGTCATGGCTCGGGCTCCCGCGACTGGCAATGCTCATATATTC ACCAAGCCTGTCGTCATGAATATTGTCTCGTACGGCATTCTAGCCTTCCATACCATGACATTTGACCAGCTTCTC CCAGTTTTTCTCAGCACGGCGCCACCGCAGCAACCAGTCATGGAGCTGCCTTTCAAGTTCGTCGACGGCTTCGGG CTTGAGACCAAGACCATTGGCCTCATCATGTCAGTCCAAGGCATCTATTCGCTCCTCTCCAACTTTGCCATTGTA CCGCCCGCGACACGTCGTCTTGGCTCGCTGCGCCTCTTCCGCCTCCTCGCCGTTTCCTATTTTGCTCTCTATCTT ACCACGCCATATCTTGTTCTACTGCCTACTGCGCTGCGCATGCCATCCATCTGCCTGCTCGTCATCTGGAAATGC ACCTATTCCACCATGGCCTATCCAAACAACGCCATCTTGTTGGCCAACGCGGCTCCTTCGCGCCAGGTTCTTGGC ACTATCAATGGCGTGGCCGCCTCAACAGCCAGTCTCTGCCGCGCTCTTGGCCCCACGCTCTCGGGAGTCCTCTAT GCTGTTGGCCTTCGTACAGGATATTCTGGCCTTGCATGGTGGGTCAGCGGACTCATTACCCTGGTTGGGGCCTAC TTGAGCTTCCAAATCACTGAAGGCGACGCCCCTGACACGCAGTTGGAAAGGCACGATGCCACGCGAGACCTCGAT GAGTCGCTCTTGTACAGTGACGAAGAGGCAGTCTAG |
| Gene | >OphauB2|2761 ATGTCCAAGCCTGTTGCCTTCTCTCGGCACCAGCCAGGCAGACGACCTGCGGCCTTTCCTGTGCAGCAAATGTTC ATTCTAGGTCAGCAGCAAAATGCCCCCCTCTTCCGTTGCCATGGGGCTGACAGAGACGTCGTGGCCTGCGCTATC ATGTCTCTACAGCATGCTGCAGAATATGCGAGCCCATTGCCTTCATGTCCATCTTCCCATACATTTACTACATGA TTGAAGACTTTGGCGTCACCAGCGACCCAAGTACTATTTCTGTCTATGCTGGCATGGTCACATCTGCCTTTACTC TGGCCGAGTTTTCCACCGGCATGCTCTGGGGAAGACTGAGCGACAGGATTGGACGCAAGCCAGTGTTGCTGACGG GGTTGTTTGGCACCGCCCTGAGCGTGCTCGTCTTTGGCTTCTCCCAGAGCCTTCCTGTGGCCCTTTTGGCCCGAG CTCTGGGCGGCTTGCTTAATGGGTACGCCGCCTTTTTTTTTTTTTTGGTAACGAGGATTGCGCTGTGCTGACGTG ATTCTTTGTTGGGTTGTGCGCGGTACAGAAACATCGGTGTGCTGCAGACGACAGTGGCCGAATTAGTCACGATAA GAGAGCATCAGCGTAAGTTATACTTGTGCCCCACCTCGCGTCTCAAACCCCATCGTCACAACCATGGCTAACTCG GACTTGTAGCCCGCGCCTACACCATCATGCCCATGGTCTGGTGCATTGGGTACGTTGACGCCCGGCTCACGCCAG CCCCGGCCATCGTATCTCATGGTCCCTTGGCAGATCCATCGTCGGCCCCATGATTGGCGGCGCCCTGGCCAGGCC CTGCATCAGCTACCCCGAGCTGTTTGCCCCCGGCAGCGTCTGGGACCGATTTCCGTACTTGCTGCCCAATCTCTT CAGCGCCGCCGCCGTTCTCGTCGGCCTCGTCGTTGGTCTTCTTTTCCTCGACGAGACACATGCTACCGCCAAGCT GAGGCGCGACCGTGGCCGAGAGCTGGGCAGGCGCCTAGCATCGTGGCTGGGTGCTTCGTCGGTCCGCGTCTCTTG TACAGCTGGCAACGAGAAGCACCAAGGCCTCCTCATCTCCAACTCGGCCCCTCCTTCGCGCTACGGTGCCTGTTC GTCGCTTCCTCAGACCCCAGCAGTCGACGATGAGGAGTCTCTTCCCTCATACCAGAGTCGCCAGACATCGCCTCA GCTGCTGCCACAGAAGCAGCCGCCAGTCATGGCTCGGGCTCCCGCGACTGGCAATGCTCATATATTCACCAAGCC TGTCGTCATGAATATTGTCTCGTACGGCATTCTAGCCTTGTGCGTCTCCCAAGTCGATCTAGCCTACTGAGAATT GCAGCCAAAGATCATTGGGCTAACATGTGCTTATTTCTTGTTCCGCCATAGCCATACCATGACATTTGACCAGCT TCTCCCAGTTTTTCTCAGCACGGCGCCACCGCAGCAACCAGTCATGGAGCTGCCTTTCAAGTTCGTCGACGGCTT CGGGCTTGAGACCAAGACCATTGGCCTCATCATGTCAGTCCAAGGCATCTATTCGCTCCTCTCCAACTTTGCCAT TGTACCGCCCGCGACACGTCGTCTTGGCTCGCTGCGCCTCTTCCGCCTCCTCGCCGTTTCCTATTTTGCTCTCTA TCTTACCACGCCATATCTTGTTCTACTGCCTACTGCGCTGCGCATGCCATCCATCTGCCTGCTCGTCATCTGGAA ATGCACCTATTCCACCATGGCCTATCCAAACAACGCCATCTTGTTGGCCAACGCGGCTCCTTCGCGCCAGGTTCT TGGCACTATCAATGGCGTGGCCGCCTCAACAGCCAGTCTCTGCCGCGCTCTTGGCCCCACGCTCTCGGGAGTCCT CTATGCTGTTGGCCTTCGTACAGGATATTCTGGCCTTGCATGGTGGGTCAGCGGACTCATTACCCTGGTTGGGGC CTACTTGAGCTTCCAAATCACTGAAGGCGACGCCCCTGACACGCAGTTGGAAAGGCACGATGCCACGCGAGACCT CGATGAGTCGCTCTTGTACAGTGACGAAGAGGCAGTCTAG |