Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|2755
Gene name
LocationContig_19:183134..184401
Strand+
Gene length (bp)1267
Transcript length (bp)1209
Coding sequence length (bp)1209
Protein length (aa) 403

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13532 2OG-FeII_Oxy_2 2OG-Fe(II) oxygenase superfamily 6.0E-36 105 330
PF06839 zf-GRF GRF zinc finger 4.9E-10 343 387

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q5XIC8|ALKB3_RAT Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Rattus norvegicus GN=Alkbh3 PE=2 SV=1 223 342 1.0E-11
sp|Q8K1E6|ALKB3_MOUSE Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Mus musculus GN=Alkbh3 PE=1 SV=1 223 343 3.0E-11
sp|Q96Q83|ALKB3_HUMAN Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Homo sapiens GN=ALKBH3 PE=1 SV=1 223 342 2.0E-10
sp|Q32L00|ALKB3_BOVIN Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Bos taurus GN=ALKBH3 PE=2 SV=1 223 330 2.0E-10
sp|Q9SIE0|ALKB2_ARATH DNA oxidative demethylase ALKBH2 OS=Arabidopsis thaliana GN=ALKBH2 PE=2 SV=2 98 330 2.0E-09

GO

GO Term Description Terminal node
GO:0008270 zinc ion binding Yes
GO:0046872 metal ion binding No
GO:0003674 molecular_function No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0046914 transition metal ion binding No
GO:0043169 cation binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Zinc finger, GRF-type

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup3932
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|122
Ophiocordyceps australis map64 (Brazil) OphauB2|2755 (this protein)
Ophiocordyceps camponoti-floridani Ophcf2|04015
Ophiocordyceps camponoti-rufipedis Ophun1|1979
Ophiocordyceps kimflemingae Ophio5|8573
Ophiocordyceps subramaniannii Hirsu2|7831

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|2755
MDGDGDEATEVKLALLASLHGGLDEETLLNLVVAHNGSVSQASLAVQASQAGVKKGNASGRQQSLKRYATAWGHG
PAAKKAKAAGKKGSTLHLYDADDVSHYTPCSIIHNFLPAQEAEDLLRELLDEAKTFQKPTFKLFDQVVSSRHTSS
FYVESYEAMQMQKADYYYNGSKLTDVRPITGQLSMVKPVVQMAVNSEIERRIRTRYPRGQKLKHQSGDEWVPNMA
FVNCYQGGDESVGWHSDQLTYLGPRAVIGSLSLGVAREFRVRRVLPASGQAEGQAEGQVAIHLPHNSLLVMHAEM
QEEWKHCVAAAASIDPHPVAGNRRINITYRHYRDYMHPRHTPRCSCAVPCVLRVVQKRRDNQGRYFWMCHAGNVP
GKQGCCFFQWAEFDADGKPLLPSEPGL*
Coding >OphauB2|2755
ATGGATGGCGACGGCGACGAAGCAACCGAAGTCAAGCTCGCGCTGCTTGCGTCGCTGCATGGCGGGCTTGATGAG
GAGACGCTTCTGAATCTTGTTGTGGCACACAATGGCTCCGTCAGCCAGGCGTCACTGGCTGTGCAGGCCAGTCAG
GCTGGGGTGAAGAAGGGAAACGCGTCGGGGCGGCAGCAGTCGCTCAAGCGCTATGCAACGGCTTGGGGCCATGGG
CCTGCAGCCAAGAAGGCAAAGGCGGCGGGGAAAAAGGGAAGCACGCTGCACCTCTACGATGCCGACGACGTATCC
CATTACACGCCATGCAGCATTATCCACAACTTTCTGCCGGCGCAAGAGGCAGAGGATTTGTTGCGGGAGCTCCTG
GACGAGGCCAAGACGTTTCAGAAGCCCACGTTCAAGCTCTTTGACCAGGTGGTGTCGAGCCGGCACACATCGAGC
TTCTACGTGGAGAGCTACGAAGCCATGCAGATGCAAAAGGCTGACTACTACTACAACGGGTCCAAGCTGACGGAC
GTGCGGCCCATTACTGGGCAGCTCAGCATGGTCAAGCCCGTGGTGCAGATGGCTGTCAACTCGGAAATTGAGCGA
CGCATCAGGACGCGGTATCCCCGAGGCCAGAAACTCAAGCACCAGTCGGGGGACGAGTGGGTGCCCAACATGGCC
TTTGTCAACTGCTACCAGGGCGGCGATGAGAGCGTGGGCTGGCACAGCGACCAACTGACATATCTGGGCCCACGG
GCCGTTATTGGCTCACTATCGCTGGGGGTGGCGCGCGAGTTTCGCGTGCGGCGCGTGCTTCCCGCATCGGGCCAA
GCCGAGGGCCAAGCCGAGGGCCAGGTGGCCATTCACCTGCCTCACAATTCGCTGCTCGTCATGCACGCCGAGATG
CAGGAGGAGTGGAAGCATTGCGTGGCGGCGGCCGCTTCCATCGACCCGCACCCGGTGGCGGGCAACCGGCGCATC
AACATCACGTACCGGCATTACCGCGACTACATGCACCCGCGCCACACGCCACGCTGCTCCTGTGCCGTGCCCTGT
GTGCTGCGGGTTGTGCAAAAGAGGCGCGACAATCAGGGCAGGTATTTTTGGATGTGCCATGCCGGCAATGTGCCG
GGCAAGCAGGGCTGTTGCTTTTTCCAATGGGCCGAGTTTGACGCTGATGGGAAGCCATTGCTGCCCAGCGAGCCG
GGGCTGTGA
Transcript >OphauB2|2755
ATGGATGGCGACGGCGACGAAGCAACCGAAGTCAAGCTCGCGCTGCTTGCGTCGCTGCATGGCGGGCTTGATGAG
GAGACGCTTCTGAATCTTGTTGTGGCACACAATGGCTCCGTCAGCCAGGCGTCACTGGCTGTGCAGGCCAGTCAG
GCTGGGGTGAAGAAGGGAAACGCGTCGGGGCGGCAGCAGTCGCTCAAGCGCTATGCAACGGCTTGGGGCCATGGG
CCTGCAGCCAAGAAGGCAAAGGCGGCGGGGAAAAAGGGAAGCACGCTGCACCTCTACGATGCCGACGACGTATCC
CATTACACGCCATGCAGCATTATCCACAACTTTCTGCCGGCGCAAGAGGCAGAGGATTTGTTGCGGGAGCTCCTG
GACGAGGCCAAGACGTTTCAGAAGCCCACGTTCAAGCTCTTTGACCAGGTGGTGTCGAGCCGGCACACATCGAGC
TTCTACGTGGAGAGCTACGAAGCCATGCAGATGCAAAAGGCTGACTACTACTACAACGGGTCCAAGCTGACGGAC
GTGCGGCCCATTACTGGGCAGCTCAGCATGGTCAAGCCCGTGGTGCAGATGGCTGTCAACTCGGAAATTGAGCGA
CGCATCAGGACGCGGTATCCCCGAGGCCAGAAACTCAAGCACCAGTCGGGGGACGAGTGGGTGCCCAACATGGCC
TTTGTCAACTGCTACCAGGGCGGCGATGAGAGCGTGGGCTGGCACAGCGACCAACTGACATATCTGGGCCCACGG
GCCGTTATTGGCTCACTATCGCTGGGGGTGGCGCGCGAGTTTCGCGTGCGGCGCGTGCTTCCCGCATCGGGCCAA
GCCGAGGGCCAAGCCGAGGGCCAGGTGGCCATTCACCTGCCTCACAATTCGCTGCTCGTCATGCACGCCGAGATG
CAGGAGGAGTGGAAGCATTGCGTGGCGGCGGCCGCTTCCATCGACCCGCACCCGGTGGCGGGCAACCGGCGCATC
AACATCACGTACCGGCATTACCGCGACTACATGCACCCGCGCCACACGCCACGCTGCTCCTGTGCCGTGCCCTGT
GTGCTGCGGGTTGTGCAAAAGAGGCGCGACAATCAGGGCAGGTATTTTTGGATGTGCCATGCCGGCAATGTGCCG
GGCAAGCAGGGCTGTTGCTTTTTCCAATGGGCCGAGTTTGACGCTGATGGGAAGCCATTGCTGCCCAGCGAGCCG
GGGCTGTGA
Gene >OphauB2|2755
ATGGATGGCGACGGCGACGAAGCAACCGAAGTCAAGCTCGCGCTGCTTGCGTCGCTGCATGGCGGGCTTGATGAG
GAGACGCTTCTGAATCTTGTTGTGGCACACAATGGCTCCGTCAGCCAGGCGTCACTGGCTGTGCAGGCCAGTCAG
GCTGGGGTGAAGAAGGGAAACGCGTCGGGGCGGCAGCAGTCGCTCAAGCGCTATGCAACGGCTTGGGGCCATGGG
CCTGCAGCCAAGAAGGCAAAGGCGGCGGGGAAAAAGGGAAGCACGCTGCACCTCTACGATGCCGACGACGTATCC
CATTACACGCCATGCAGCATTATCCACAACTTTCTGCCGGCGCAAGAGGCAGAGGATTTGTTGCGGGAGCTCCTG
GACGAGGCCAAGACGTTTCAGAAGCCCACGTTCAAGCTCTTTGACCAGGTGGTGTCGAGCCGGCACACATCGAGC
TTCTACGTGGAGAGCTACGAAGCCATGCAGATGCAAAAGGCTGACTACTACTACAACGGGTCCAAGCTGACGGCA
AGTGGTGCGCTGTGTGGGGTGTGGAGGAGAGAAGCAAGACTGACTGGCGGCACAGGACGTGCGGCCCATTACTGG
GCAGCTCAGCATGGTCAAGCCCGTGGTGCAGATGGCTGTCAACTCGGAAATTGAGCGACGCATCAGGACGCGGTA
TCCCCGAGGCCAGAAACTCAAGCACCAGTCGGGGGACGAGTGGGTGCCCAACATGGCCTTTGTCAACTGCTACCA
GGGCGGCGATGAGAGCGTGGGCTGGCACAGCGACCAACTGACATATCTGGGCCCACGGGCCGTTATTGGCTCACT
ATCGCTGGGGGTGGCGCGCGAGTTTCGCGTGCGGCGCGTGCTTCCCGCATCGGGCCAAGCCGAGGGCCAAGCCGA
GGGCCAGGTGGCCATTCACCTGCCTCACAATTCGCTGCTCGTCATGCACGCCGAGATGCAGGAGGAGTGGAAGCA
TTGCGTGGCGGCGGCCGCTTCCATCGACCCGCACCCGGTGGCGGGCAACCGGCGCATCAACATCACGTACCGGCA
TTACCGCGACTACATGCACCCGCGCCACACGCCACGCTGCTCCTGTGCCGTGCCCTGTGTGCTGCGGGTTGTGCA
AAAGAGGCGCGACAATCAGGGCAGGTATTTTTGGATGTGCCATGCCGGCAATGTGCCGGGCAAGCAGGGCTGTTG
CTTTTTCCAATGGGCCGAGTTTGACGCTGATGGGAAGCCATTGCTGCCCAGCGAGCCGGGGCTGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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